RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 MAPKBP1O60336 1514 aa24.96■■□□□ 1.59
KDM1A-201ENST00000356634 WDR97A6NE52 1622 aa24.96■■□□□ 1.59
KDM1A-201ENST00000356634 PPP1R15AO75807 674 aaPredicted RBP24.93■■□□□ 1.58
KDM1A-201ENST00000356634 SETD5Q9C0A6 1442 aa24.91■■□□□ 1.58
KDM1A-201ENST00000356634 ARHGAP35Q9NRY4 1499 aa24.89■■□□□ 1.57
KDM1A-201ENST00000356634 IRX6P78412 446 aaPredicted RBP24.88■■□□□ 1.57
KDM1A-201ENST00000356634 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
KDM1A-201ENST00000356634 ERICH6Q7L0X2 663 aa24.87■■□□□ 1.57
KDM1A-201ENST00000356634 CCER2I3L3R5 266 aa24.84■■□□□ 1.57
KDM1A-201ENST00000356634 MSH5O43196 834 aa24.82■■□□□ 1.56
KDM1A-201ENST00000356634 CUX1P39880 1505 aa24.81■■□□□ 1.56
KDM1A-201ENST00000356634 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
KDM1A-201ENST00000356634 HNRNPUQ00839 825 aaKnown RBP eCLIP24.78■■□□□ 1.56
KDM1A-201ENST00000356634 CDK11AQ9UQ88 783 aaPredicted RBP24.76■■□□□ 1.55
KDM1A-201ENST00000356634 PHLDB1Q86UU1 1377 aa24.76■■□□□ 1.55
KDM1A-201ENST00000356634 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
KDM1A-201ENST00000356634 TONSLQ96HA7 1378 aa24.7■■□□□ 1.54
KDM1A-201ENST00000356634 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
KDM1A-201ENST00000356634 TIAM1Q13009 1591 aa24.68■■□□□ 1.54
KDM1A-201ENST00000356634 TIMELESSQ9UNS1 1208 aa24.68■■□□□ 1.54
KDM1A-201ENST00000356634 LRRC9Q6ZRR7 1453 aa24.65■■□□□ 1.54
KDM1A-201ENST00000356634 CFTRP13569 1480 aa24.61■■□□□ 1.53
KDM1A-201ENST00000356634 FANCIQ9NVI1 1328 aa24.59■■□□□ 1.53
KDM1A-201ENST00000356634 IGF1RP08069 1367 aa24.57■■□□□ 1.52
KDM1A-201ENST00000356634 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
KDM1A-201ENST00000356634 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
KDM1A-201ENST00000356634 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
KDM1A-201ENST00000356634 NESP48681 1621 aa24.5■■□□□ 1.51
KDM1A-201ENST00000356634 ARID3CA6NKF2 412 aa24.49■■□□□ 1.51
KDM1A-201ENST00000356634 MAP3K1Q13233 1512 aa24.49■■□□□ 1.51
KDM1A-201ENST00000356634 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
KDM1A-201ENST00000356634 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
KDM1A-201ENST00000356634 FGD5Q6ZNL6 1462 aa24.47■■□□□ 1.51
KDM1A-201ENST00000356634 B4GALNT3Q6L9W6 998 aa24.46■■□□□ 1.51
KDM1A-201ENST00000356634 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
KDM1A-201ENST00000356634 PPP4R2Q9NY27 417 aa24.44■■□□□ 1.5
KDM1A-201ENST00000356634 FHOD3Q2V2M9 1422 aa24.42■■□□□ 1.5
KDM1A-201ENST00000356634 PCF11O94913 1555 aaKnown RBP24.4■■□□□ 1.5
KDM1A-201ENST00000356634 CCDC18Q5T9S5 1454 aa24.39■■□□□ 1.5
KDM1A-201ENST00000356634 CCDC184Q52MB2 194 aa24.38■■□□□ 1.49
KDM1A-201ENST00000356634 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
KDM1A-201ENST00000356634 NBR1Q14596 966 aa24.37■■□□□ 1.49
KDM1A-201ENST00000356634 DEKP35659 375 aaKnown RBP24.37■■□□□ 1.49
KDM1A-201ENST00000356634 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
KDM1A-201ENST00000356634 WASHC2AQ641Q2 1341 aa24.36■■□□□ 1.49
KDM1A-201ENST00000356634 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
KDM1A-201ENST00000356634 CNGB1Q14028 1251 aaPredicted RBP24.34■■□□□ 1.49
KDM1A-201ENST00000356634 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
KDM1A-201ENST00000356634 MRS2Q9HD23 443 aa24.32■■□□□ 1.48
KDM1A-201ENST00000356634 MTUS2Q5JR59 1369 aa24.3■■□□□ 1.48
KDM1A-201ENST00000356634 UACAQ9BZF9 1416 aa24.3■■□□□ 1.48
KDM1A-201ENST00000356634 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
KDM1A-201ENST00000356634 FGD6Q6ZV73 1430 aa24.29■■□□□ 1.48
KDM1A-201ENST00000356634 ERICH6BQ5W0A0 696 aa24.29■■□□□ 1.48
KDM1A-201ENST00000356634 EIF4G2P78344 907 aaKnown RBP eCLIP24.28■■□□□ 1.486e-7■■■■■ 31.9
KDM1A-201ENST00000356634 CHIC2Q9UKJ5 165 aa24.28■■□□□ 1.48
KDM1A-201ENST00000356634 RRP7BPQ9NSQ0 103 aa24.27■■□□□ 1.48
KDM1A-201ENST00000356634 MYT1LQ9UL68 1186 aa24.26■■□□□ 1.47
KDM1A-201ENST00000356634 PTPRKQ15262 1439 aa24.25■■□□□ 1.47
KDM1A-201ENST00000356634 NOP58Q9Y2X3 529 aaKnown RBP24.24■■□□□ 1.47
KDM1A-201ENST00000356634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.22■■□□□ 1.476e-6■□□□□ 9.1
KDM1A-201ENST00000356634 HFM1A2PYH4 1435 aa24.22■■□□□ 1.47
KDM1A-201ENST00000356634 FYCO1Q9BQS8 1478 aa24.21■■□□□ 1.47
KDM1A-201ENST00000356634 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.462e-13■■■□□ 16.5
KDM1A-201ENST00000356634 SENP3-EIF4A1A0A087X0R7 540 aa24.19■■□□□ 1.46
KDM1A-201ENST00000356634 PRKRIP1Q9H875 184 aaPredicted RBP24.19■■□□□ 1.46
KDM1A-201ENST00000356634 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
KDM1A-201ENST00000356634 CASKIN1Q8WXD9 1431 aa24.19■■□□□ 1.46
KDM1A-201ENST00000356634 NAIPQ13075 1403 aa24.17■■□□□ 1.46
KDM1A-201ENST00000356634 PTPN23Q9H3S7 1636 aa24.16■■□□□ 1.46
KDM1A-201ENST00000356634 C11orf95C9JLR9 678 aaPredicted RBP24.16■■□□□ 1.46
KDM1A-201ENST00000356634 FOXD1Q16676 465 aa24.15■■□□□ 1.46
KDM1A-201ENST00000356634 CNTLNQ9NXG0 1405 aa24.15■■□□□ 1.46
KDM1A-201ENST00000356634 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
KDM1A-201ENST00000356634 ZBED9Q6R2W3 1325 aa24.14■■□□□ 1.46
KDM1A-201ENST00000356634 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
KDM1A-201ENST00000356634 POLR3GLQ9BT43 218 aa24.13■■□□□ 1.45
KDM1A-201ENST00000356634 L3MBTL2Q969R5 705 aa24.11■■□□□ 1.45
KDM1A-201ENST00000356634 CCDC136Q96JN2 1154 aa24.1■■□□□ 1.45
KDM1A-201ENST00000356634 ANP32AP39687 249 aaKnown RBP24.09■■□□□ 1.45
KDM1A-201ENST00000356634 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
KDM1A-201ENST00000356634 KDM5BQ9UGL1 1544 aa24.08■■□□□ 1.45
KDM1A-201ENST00000356634 RTL5Q5HYW3 569 aaPredicted RBP24.08■■□□□ 1.44
KDM1A-201ENST00000356634 CCDC7Q96M83 1385 aa24.06■■□□□ 1.44
KDM1A-201ENST00000356634 NCOA2Q15596 1464 aa24.04■■□□□ 1.44
KDM1A-201ENST00000356634 MYOM3Q5VTT5 1437 aa24.04■■□□□ 1.44
KDM1A-201ENST00000356634 AKNAQ7Z591 1439 aa24.03■■□□□ 1.44
KDM1A-201ENST00000356634 EFCAB5A4FU69 1503 aa24.02■■□□□ 1.44
KDM1A-201ENST00000356634 MPHOSPH9Q99550 1183 aa24.02■■□□□ 1.44
KDM1A-201ENST00000356634 ZBTB47Q9UFB7 747 aaPredicted RBP24.01■■□□□ 1.43
KDM1A-201ENST00000356634 IPO9Q96P70 1041 aaKnown RBP23.97■■□□□ 1.43
KDM1A-201ENST00000356634 NPM2Q86SE8 214 aaKnown RBP23.97■■□□□ 1.43
KDM1A-201ENST00000356634 KIF7Q2M1P5 1343 aa23.96■■□□□ 1.43
KDM1A-201ENST00000356634 URB2Q14146 1524 aaKnown RBP23.96■■□□□ 1.43
KDM1A-201ENST00000356634 NCOA1Q15788 1441 aa23.95■■□□□ 1.43
KDM1A-201ENST00000356634 NBPF8Q3BBV2 869 aa23.95■■□□□ 1.43
KDM1A-201ENST00000356634 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
KDM1A-201ENST00000356634 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
KDM1A-201ENST00000356634 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
KDM1A-201ENST00000356634 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms