RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
PKP1-202ENST00000352845 ITGAEP38570 1179 aa14.82□□□□□ -0.04
PKP1-202ENST00000352845 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
PKP1-202ENST00000352845 NESP48681 1621 aa14.8□□□□□ -0.04
PKP1-202ENST00000352845 CUX2O14529 1486 aa14.78□□□□□ -0.04
PKP1-202ENST00000352845 RANGAP1P46060 587 aaPredicted RBP14.77□□□□□ -0.04
PKP1-202ENST00000352845 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.04
PKP1-202ENST00000352845 RRBP1Q9P2E9 1410 aaKnown RBP14.77□□□□□ -0.04
PKP1-202ENST00000352845 KANK4Q5T7N3 995 aaPredicted RBP14.77□□□□□ -0.05
PKP1-202ENST00000352845 CCDC136Q96JN2 1154 aa14.77□□□□□ -0.05
PKP1-202ENST00000352845 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
PKP1-202ENST00000352845 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
PKP1-202ENST00000352845 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
PKP1-202ENST00000352845 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
PKP1-202ENST00000352845 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
PKP1-202ENST00000352845 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
PKP1-202ENST00000352845 CCER2I3L3R5 266 aa14.73□□□□□ -0.05
PKP1-202ENST00000352845 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
PKP1-202ENST00000352845 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
PKP1-202ENST00000352845 NBR1Q14596 966 aa14.66□□□□□ -0.06
PKP1-202ENST00000352845 IL27Q8NEV9 243 aa14.66□□□□□ -0.06
PKP1-202ENST00000352845 PKNOX2Q96KN3 472 aa14.66□□□□□ -0.06
PKP1-202ENST00000352845 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
PKP1-202ENST00000352845 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
PKP1-202ENST00000352845 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
PKP1-202ENST00000352845 C11orf95C9JLR9 678 aaPredicted RBP14.64□□□□□ -0.07
PKP1-202ENST00000352845 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
PKP1-202ENST00000352845 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
PKP1-202ENST00000352845 PPP4R2Q9NY27 417 aa14.62□□□□□ -0.07
PKP1-202ENST00000352845 TOPBP1Q92547 1522 aa14.62□□□□□ -0.07
PKP1-202ENST00000352845 ARHGAP35Q9NRY4 1499 aa14.6□□□□□ -0.07
PKP1-202ENST00000352845 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
PKP1-202ENST00000352845 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
PKP1-202ENST00000352845 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.07
PKP1-202ENST00000352845 WASHC2AQ641Q2 1341 aa14.58□□□□□ -0.08
PKP1-202ENST00000352845 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
PKP1-202ENST00000352845 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
PKP1-202ENST00000352845 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
PKP1-202ENST00000352845 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
PKP1-202ENST00000352845 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
PKP1-202ENST00000352845 TRIM52Q96A61 297 aa14.56□□□□□ -0.08
PKP1-202ENST00000352845 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
PKP1-202ENST00000352845 WDR97A6NE52 1622 aa14.55□□□□□ -0.08
PKP1-202ENST00000352845 ANP32CO43423 234 aa14.54□□□□□ -0.08
PKP1-202ENST00000352845 ANP32AP39687 249 aaKnown RBP14.54□□□□□ -0.08
PKP1-202ENST00000352845 IPO9Q96P70 1041 aaKnown RBP14.54□□□□□ -0.08
PKP1-202ENST00000352845 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
PKP1-202ENST00000352845 IGF1RP08069 1367 aa14.54□□□□□ -0.08
PKP1-202ENST00000352845 PPP1R15AO75807 674 aaPredicted RBP14.53□□□□□ -0.08
PKP1-202ENST00000352845 WASHC2CQ9Y4E1 1318 aa14.53□□□□□ -0.08
PKP1-202ENST00000352845 GLIPR1L2Q4G1C9 344 aa14.53□□□□□ -0.08
PKP1-202ENST00000352845 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
PKP1-202ENST00000352845 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
PKP1-202ENST00000352845 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
PKP1-202ENST00000352845 DDX10Q13206 875 aaKnown RBP14.5□□□□□ -0.09
PKP1-202ENST00000352845 DAXXQ9UER7 740 aaPredicted RBP14.5□□□□□ -0.09
PKP1-202ENST00000352845 TIAM1Q13009 1591 aa14.5□□□□□ -0.09
PKP1-202ENST00000352845 MAP3K1Q13233 1512 aa14.5□□□□□ -0.09
PKP1-202ENST00000352845 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
PKP1-202ENST00000352845 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
PKP1-202ENST00000352845 SIN3AQ96ST3 1273 aa14.46□□□□□ -0.1
PKP1-202ENST00000352845 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
PKP1-202ENST00000352845 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
PKP1-202ENST00000352845 TIMELESSQ9UNS1 1208 aa14.42□□□□□ -0.1
PKP1-202ENST00000352845 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
PKP1-202ENST00000352845 ABCA5Q8WWZ7 1642 aa14.4□□□□□ -0.1
PKP1-202ENST00000352845 IRX6P78412 446 aaPredicted RBP14.39□□□□□ -0.11
PKP1-202ENST00000352845 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
PKP1-202ENST00000352845 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
PKP1-202ENST00000352845 CFAP43Q8NDM7 1665 aa14.39□□□□□ -0.11
PKP1-202ENST00000352845 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
PKP1-202ENST00000352845 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
PKP1-202ENST00000352845 CUL7Q14999 1698 aa14.36□□□□□ -0.11
PKP1-202ENST00000352845 HIRIP3Q9BW71 556 aaPredicted RBP14.36□□□□□ -0.11
PKP1-202ENST00000352845 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
PKP1-202ENST00000352845 NEFMP07197 916 aa14.35□□□□□ -0.11
PKP1-202ENST00000352845 PODXL2Q9NZ53 605 aa14.35□□□□□ -0.11
PKP1-202ENST00000352845 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
PKP1-202ENST00000352845 B4GALNT3Q6L9W6 998 aa14.34□□□□□ -0.11
PKP1-202ENST00000352845 PCF11O94913 1555 aaKnown RBP14.33□□□□□ -0.11
PKP1-202ENST00000352845 FAM43AQ8N2R8 423 aa14.33□□□□□ -0.12
PKP1-202ENST00000352845 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
PKP1-202ENST00000352845 WDR62O43379 1518 aa14.32□□□□□ -0.12
PKP1-202ENST00000352845 GSE1Q14687 1217 aa14.3□□□□□ -0.12
PKP1-202ENST00000352845 BRPF3Q9ULD4 1205 aa14.3□□□□□ -0.12
PKP1-202ENST00000352845 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
PKP1-202ENST00000352845 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
PKP1-202ENST00000352845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.28□□□□□ -0.12
PKP1-202ENST00000352845 ZMYND15Q9H091 742 aa14.27□□□□□ -0.12
PKP1-202ENST00000352845 PBRM1Q86U86 1689 aa14.27□□□□□ -0.12
PKP1-202ENST00000352845 CTTNBP2Q8WZ74 1663 aa14.27□□□□□ -0.13
PKP1-202ENST00000352845 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
PKP1-202ENST00000352845 KDM5BQ9UGL1 1544 aa14.25□□□□□ -0.13
PKP1-202ENST00000352845 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
PKP1-202ENST00000352845 IFT140Q96RY7 1462 aa14.23□□□□□ -0.13
PKP1-202ENST00000352845 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
PKP1-202ENST00000352845 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
PKP1-202ENST00000352845 VSIG10Q8N0Z9 540 aa14.22□□□□□ -0.13
PKP1-202ENST00000352845 ZBED9Q6R2W3 1325 aa14.22□□□□□ -0.13
PKP1-202ENST00000352845 PTPRKQ15262 1439 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms