RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.02
TRAF3-202ENST00000351691 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
TRAF3-202ENST00000351691 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
TRAF3-202ENST00000351691 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
TRAF3-202ENST00000351691 MAP3K1Q13233 1512 aa21.4■■□□□ 1.02
TRAF3-202ENST00000351691 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
TRAF3-202ENST00000351691 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
TRAF3-202ENST00000351691 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
TRAF3-202ENST00000351691 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
TRAF3-202ENST00000351691 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
TRAF3-202ENST00000351691 RBM19Q9Y4C8 960 aaKnown RBP21.28■■□□□ 1
TRAF3-202ENST00000351691 TIAM1Q13009 1591 aa21.27■■□□□ 1
TRAF3-202ENST00000351691 CCNB3Q8WWL7 1395 aa21.26■□□□□ 0.99
TRAF3-202ENST00000351691 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
TRAF3-202ENST00000351691 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
TRAF3-202ENST00000351691 FHAD1B1AJZ9 1412 aa21.24■□□□□ 0.99
TRAF3-202ENST00000351691 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
TRAF3-202ENST00000351691 FKBP8Q14318 412 aa21.23■□□□□ 0.99
TRAF3-202ENST00000351691 CUL7Q14999 1698 aa21.22■□□□□ 0.99
TRAF3-202ENST00000351691 EFCAB5A4FU69 1503 aa21.19■□□□□ 0.98
TRAF3-202ENST00000351691 NEFLP07196 543 aa21.18■□□□□ 0.98
TRAF3-202ENST00000351691 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
TRAF3-202ENST00000351691 THOC2Q8NI27 1593 aaKnown RBP21.18■□□□□ 0.98
TRAF3-202ENST00000351691 LRRC9Q6ZRR7 1453 aa21.16■□□□□ 0.98
TRAF3-202ENST00000351691 WDR62O43379 1518 aa21.15■□□□□ 0.98
TRAF3-202ENST00000351691 BCANQ96GW7 911 aa21.14■□□□□ 0.98
TRAF3-202ENST00000351691 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.97
TRAF3-202ENST00000351691 FANCIQ9NVI1 1328 aa21.12■□□□□ 0.97
TRAF3-202ENST00000351691 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
TRAF3-202ENST00000351691 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.974e-6■■■■■ 31
TRAF3-202ENST00000351691 MYT1LQ9UL68 1186 aa21.12■□□□□ 0.97
TRAF3-202ENST00000351691 CTTNBP2Q8WZ74 1663 aa21.11■□□□□ 0.97
TRAF3-202ENST00000351691 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
TRAF3-202ENST00000351691 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
TRAF3-202ENST00000351691 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
TRAF3-202ENST00000351691 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
TRAF3-202ENST00000351691 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
TRAF3-202ENST00000351691 MAPKBP1O60336 1514 aa21.06■□□□□ 0.96
TRAF3-202ENST00000351691 CASKIN1Q8WXD9 1431 aa21.06■□□□□ 0.96
TRAF3-202ENST00000351691 MSH5O43196 834 aa21.04■□□□□ 0.96
TRAF3-202ENST00000351691 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
TRAF3-202ENST00000351691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.95
TRAF3-202ENST00000351691 PPP1R15AO75807 674 aaPredicted RBP21.01■□□□□ 0.95
TRAF3-202ENST00000351691 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
TRAF3-202ENST00000351691 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
TRAF3-202ENST00000351691 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
TRAF3-202ENST00000351691 PHLDB1Q86UU1 1377 aa20.99■□□□□ 0.95
TRAF3-202ENST00000351691 RAB3GAP2Q9H2M9 1393 aa20.99■□□□□ 0.95
TRAF3-202ENST00000351691 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
TRAF3-202ENST00000351691 FHOD3Q2V2M9 1422 aa20.98■□□□□ 0.95
TRAF3-202ENST00000351691 ZNF608Q9ULD9 1512 aaPredicted RBP20.97■□□□□ 0.95
TRAF3-202ENST00000351691 SAMD9Q5K651 1589 aa20.94■□□□□ 0.94
TRAF3-202ENST00000351691 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
TRAF3-202ENST00000351691 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
TRAF3-202ENST00000351691 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
TRAF3-202ENST00000351691 ITGAEP38570 1179 aa20.92■□□□□ 0.94
TRAF3-202ENST00000351691 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
TRAF3-202ENST00000351691 ERICH6BQ5W0A0 696 aa20.9■□□□□ 0.94
TRAF3-202ENST00000351691 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
TRAF3-202ENST00000351691 ANP32CO43423 234 aa20.88■□□□□ 0.93
TRAF3-202ENST00000351691 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
TRAF3-202ENST00000351691 CDK11AQ9UQ88 783 aaPredicted RBP20.88■□□□□ 0.93
TRAF3-202ENST00000351691 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
TRAF3-202ENST00000351691 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.93
TRAF3-202ENST00000351691 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
TRAF3-202ENST00000351691 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
TRAF3-202ENST00000351691 FGD6Q6ZV73 1430 aa20.81■□□□□ 0.92
TRAF3-202ENST00000351691 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
TRAF3-202ENST00000351691 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.92
TRAF3-202ENST00000351691 PRKCSHP14314 528 aaPredicted RBP20.76■□□□□ 0.91
TRAF3-202ENST00000351691 EHBP1L1Q8N3D4 1523 aa20.76■□□□□ 0.91
TRAF3-202ENST00000351691 LRRIQ1Q96JM4 1722 aa20.75■□□□□ 0.91
TRAF3-202ENST00000351691 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
TRAF3-202ENST00000351691 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
TRAF3-202ENST00000351691 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
TRAF3-202ENST00000351691 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
TRAF3-202ENST00000351691 DEKP35659 375 aaKnown RBP20.7■□□□□ 0.9
TRAF3-202ENST00000351691 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
TRAF3-202ENST00000351691 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
TRAF3-202ENST00000351691 PPP4R2Q9NY27 417 aa20.68■□□□□ 0.9
TRAF3-202ENST00000351691 SIN3AQ96ST3 1273 aa20.68■□□□□ 0.9
TRAF3-202ENST00000351691 HECW1Q76N89 1606 aa20.67■□□□□ 0.9
TRAF3-202ENST00000351691 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
TRAF3-202ENST00000351691 IQGAP2Q13576 1575 aa20.66■□□□□ 0.9
TRAF3-202ENST00000351691 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
TRAF3-202ENST00000351691 UACAQ9BZF9 1416 aa20.64■□□□□ 0.89
TRAF3-202ENST00000351691 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
TRAF3-202ENST00000351691 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
TRAF3-202ENST00000351691 GRIN2AQ12879 1464 aa20.6■□□□□ 0.89
TRAF3-202ENST00000351691 PTPRKQ15262 1439 aa20.6■□□□□ 0.89
TRAF3-202ENST00000351691 NAIPQ13075 1403 aa20.58■□□□□ 0.89
TRAF3-202ENST00000351691 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRAF3-202ENST00000351691 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
TRAF3-202ENST00000351691 AKNAQ7Z591 1439 aa20.56■□□□□ 0.88
TRAF3-202ENST00000351691 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
TRAF3-202ENST00000351691 FBLN2P98095 1184 aa20.55■□□□□ 0.88
TRAF3-202ENST00000351691 EPRSP07814 1512 aaKnown RBP20.55■□□□□ 0.88
TRAF3-202ENST00000351691 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
TRAF3-202ENST00000351691 CHD1O14646 1710 aa20.54■□□□□ 0.88
TRAF3-202ENST00000351691 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms