RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ -0
SMPD4-201ENST00000351288 SIN3AQ96ST3 1273 aa15.05■□□□□ -0
SMPD4-201ENST00000351288 CCNB3Q8WWL7 1395 aa15.05■□□□□ -0
SMPD4-201ENST00000351288 ERICH3Q5RHP9 1530 aa15.05■□□□□ -0
SMPD4-201ENST00000351288 FANCD2Q9BXW9 1451 aa15.03■□□□□ -0
SMPD4-201ENST00000351288 CC2D2AQ9P2K1 1620 aa15.02■□□□□ -0
SMPD4-201ENST00000351288 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
SMPD4-201ENST00000351288 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
SMPD4-201ENST00000351288 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
SMPD4-201ENST00000351288 KCNH8Q96L42 1107 aa14.98□□□□□ -0.01
SMPD4-201ENST00000351288 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
SMPD4-201ENST00000351288 MTUS2Q5JR59 1369 aa14.97□□□□□ -0.01
SMPD4-201ENST00000351288 PHLDB1Q86UU1 1377 aa14.96□□□□□ -0.01
SMPD4-201ENST00000351288 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
SMPD4-201ENST00000351288 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
SMPD4-201ENST00000351288 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
SMPD4-201ENST00000351288 ZNF326Q5BKZ1 582 aaKnown RBP14.91□□□□□ -0.02
SMPD4-201ENST00000351288 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
SMPD4-201ENST00000351288 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
SMPD4-201ENST00000351288 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
SMPD4-201ENST00000351288 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-201ENST00000351288 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
SMPD4-201ENST00000351288 TIAM1Q13009 1591 aa14.83□□□□□ -0.03
SMPD4-201ENST00000351288 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
SMPD4-201ENST00000351288 SETD5Q9C0A6 1442 aa14.82□□□□□ -0.04
SMPD4-201ENST00000351288 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
SMPD4-201ENST00000351288 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
SMPD4-201ENST00000351288 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
SMPD4-201ENST00000351288 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.047e-7■■■■□ 21.1
SMPD4-201ENST00000351288 BCANQ96GW7 911 aa14.79□□□□□ -0.04
SMPD4-201ENST00000351288 FHAD1B1AJZ9 1412 aa14.78□□□□□ -0.04
SMPD4-201ENST00000351288 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
SMPD4-201ENST00000351288 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
SMPD4-201ENST00000351288 FOXD1Q16676 465 aa14.75□□□□□ -0.05
SMPD4-201ENST00000351288 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
SMPD4-201ENST00000351288 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
SMPD4-201ENST00000351288 WDR97A6NE52 1622 aa14.73□□□□□ -0.05
SMPD4-201ENST00000351288 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
SMPD4-201ENST00000351288 GAPVD1Q14C86 1478 aa14.72□□□□□ -0.05
SMPD4-201ENST00000351288 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
SMPD4-201ENST00000351288 TONSLQ96HA7 1378 aa14.71□□□□□ -0.05
SMPD4-201ENST00000351288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.066e-7■■■□□ 16.9
SMPD4-201ENST00000351288 PTPRKQ15262 1439 aa14.68□□□□□ -0.06
SMPD4-201ENST00000351288 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
SMPD4-201ENST00000351288 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-201ENST00000351288 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
SMPD4-201ENST00000351288 PPP1R15AO75807 674 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-201ENST00000351288 FGD6Q6ZV73 1430 aa14.64□□□□□ -0.07
SMPD4-201ENST00000351288 SENP3-EIF4A1A0A087X0R7 540 aa14.64□□□□□ -0.07
SMPD4-201ENST00000351288 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
SMPD4-201ENST00000351288 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
SMPD4-201ENST00000351288 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
SMPD4-201ENST00000351288 FMN1Q68DA7 1419 aa14.62□□□□□ -0.07
SMPD4-201ENST00000351288 FYCO1Q9BQS8 1478 aa14.62□□□□□ -0.07
SMPD4-201ENST00000351288 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
SMPD4-201ENST00000351288 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-201ENST00000351288 ZNF644Q9H582 1327 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-201ENST00000351288 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
SMPD4-201ENST00000351288 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
SMPD4-201ENST00000351288 MAP3K1Q13233 1512 aa14.58□□□□□ -0.07
SMPD4-201ENST00000351288 ANP32CO43423 234 aa14.58□□□□□ -0.08
SMPD4-201ENST00000351288 CFAP43Q8NDM7 1665 aa14.58□□□□□ -0.08
SMPD4-201ENST00000351288 FKBP8Q14318 412 aa14.58□□□□□ -0.08
SMPD4-201ENST00000351288 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
SMPD4-201ENST00000351288 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
SMPD4-201ENST00000351288 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
SMPD4-201ENST00000351288 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
SMPD4-201ENST00000351288 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
SMPD4-201ENST00000351288 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
SMPD4-201ENST00000351288 EFCAB5A4FU69 1503 aa14.54□□□□□ -0.08
SMPD4-201ENST00000351288 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
SMPD4-201ENST00000351288 CUL7Q14999 1698 aa14.53□□□□□ -0.08
SMPD4-201ENST00000351288 IRX6P78412 446 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-201ENST00000351288 MYOM3Q5VTT5 1437 aa14.52□□□□□ -0.08
SMPD4-201ENST00000351288 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.08
SMPD4-201ENST00000351288 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.09
SMPD4-201ENST00000351288 LRRIQ1Q96JM4 1722 aa14.52□□□□□ -0.09
SMPD4-201ENST00000351288 NAIPQ13075 1403 aa14.52□□□□□ -0.09
SMPD4-201ENST00000351288 MAGI3Q5TCQ9 1506 aa14.51□□□□□ -0.09
SMPD4-201ENST00000351288 NEFLP07196 543 aa14.51□□□□□ -0.09
SMPD4-201ENST00000351288 HSPA5P11021 654 aaKnown RBP14.48□□□□□ -0.09
SMPD4-201ENST00000351288 GRIN2BQ13224 1484 aa14.48□□□□□ -0.09
SMPD4-201ENST00000351288 HNRNPMP52272 730 aaKnown RBP eCLIP14.48□□□□□ -0.091e-6■■■■□ 22.6
SMPD4-201ENST00000351288 ABCA5Q8WWZ7 1642 aa14.47□□□□□ -0.09
SMPD4-201ENST00000351288 MPHOSPH9Q99550 1183 aa14.47□□□□□ -0.09
SMPD4-201ENST00000351288 HFM1A2PYH4 1435 aa14.47□□□□□ -0.09
SMPD4-201ENST00000351288 L3MBTL2Q969R5 705 aa14.47□□□□□ -0.09
SMPD4-201ENST00000351288 UACAQ9BZF9 1416 aa14.46□□□□□ -0.09
SMPD4-201ENST00000351288 HNRNPUQ00839 825 aaKnown RBP eCLIP14.46□□□□□ -0.1
SMPD4-201ENST00000351288 FAM9BQ8IZU0 186 aa14.45□□□□□ -0.1
SMPD4-201ENST00000351288 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
SMPD4-201ENST00000351288 PTPN23Q9H3S7 1636 aa14.45□□□□□ -0.1
SMPD4-201ENST00000351288 CCDC184Q52MB2 194 aa14.44□□□□□ -0.1
SMPD4-201ENST00000351288 KDM6BO15054 1643 aa14.43□□□□□ -0.1
SMPD4-201ENST00000351288 C11orf95C9JLR9 678 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-201ENST00000351288 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
SMPD4-201ENST00000351288 SAMD9Q5K651 1589 aa14.42□□□□□ -0.1
SMPD4-201ENST00000351288 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
SMPD4-201ENST00000351288 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
SMPD4-201ENST00000351288 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms