RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 CHMP7Q8WUX9 453 aaPredicted RBP12.51□□□□□ -0.41
CAST-205ENST00000348386 ERICH3Q5RHP9 1530 aa12.51□□□□□ -0.41
CAST-205ENST00000348386 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
CAST-205ENST00000348386 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
CAST-205ENST00000348386 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
CAST-205ENST00000348386 FKBP8Q14318 412 aa12.48□□□□□ -0.41
CAST-205ENST00000348386 PBRM1Q86U86 1689 aa12.47□□□□□ -0.41
CAST-205ENST00000348386 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
CAST-205ENST00000348386 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.42
CAST-205ENST00000348386 MAGI1Q96QZ7 1491 aaPredicted RBP12.45□□□□□ -0.42
CAST-205ENST00000348386 GOLGA3Q08378 1498 aa12.45□□□□□ -0.42
CAST-205ENST00000348386 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
CAST-205ENST00000348386 CUL7Q14999 1698 aa12.43□□□□□ -0.42
CAST-205ENST00000348386 SYNJ2O15056 1496 aa12.43□□□□□ -0.42
CAST-205ENST00000348386 DAXXQ9UER7 740 aaPredicted RBP12.42□□□□□ -0.42
CAST-205ENST00000348386 KIF21BO75037 1637 aa12.41□□□□□ -0.42
CAST-205ENST00000348386 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
CAST-205ENST00000348386 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
CAST-205ENST00000348386 FOXD1Q16676 465 aa12.39□□□□□ -0.43
CAST-205ENST00000348386 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
CAST-205ENST00000348386 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
CAST-205ENST00000348386 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
CAST-205ENST00000348386 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
CAST-205ENST00000348386 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
CAST-205ENST00000348386 CHD1O14646 1710 aa12.32□□□□□ -0.44
CAST-205ENST00000348386 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
CAST-205ENST00000348386 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
CAST-205ENST00000348386 NUP160Q12769 1436 aa12.3□□□□□ -0.44
CAST-205ENST00000348386 TTBK1Q5TCY1 1321 aaPredicted RBP12.3□□□□□ -0.44
CAST-205ENST00000348386 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
CAST-205ENST00000348386 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
CAST-205ENST00000348386 KIAA0586Q9BVV6 1533 aa12.29□□□□□ -0.44
CAST-205ENST00000348386 BCANQ96GW7 911 aa12.28□□□□□ -0.44
CAST-205ENST00000348386 CLIP1P30622 1438 aa12.27□□□□□ -0.45
CAST-205ENST00000348386 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
CAST-205ENST00000348386 IQGAP2Q13576 1575 aa12.25□□□□□ -0.45
CAST-205ENST00000348386 CTTNBP2Q8WZ74 1663 aa12.23□□□□□ -0.45
CAST-205ENST00000348386 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.45
CAST-205ENST00000348386 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
CAST-205ENST00000348386 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
CAST-205ENST00000348386 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
CAST-205ENST00000348386 CLASP1Q7Z460 1538 aa12.19□□□□□ -0.46
CAST-205ENST00000348386 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
CAST-205ENST00000348386 CARMIL2Q6F5E8 1435 aa12.18□□□□□ -0.46
CAST-205ENST00000348386 UGGT2Q9NYU1 1516 aa12.17□□□□□ -0.46
CAST-205ENST00000348386 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
CAST-205ENST00000348386 DISP1Q96F81 1524 aa12.16□□□□□ -0.46
CAST-205ENST00000348386 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
CAST-205ENST00000348386 EFCAB5A4FU69 1503 aa12.13□□□□□ -0.47
CAST-205ENST00000348386 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
CAST-205ENST00000348386 KIAA0556O60303 1618 aa12.12□□□□□ -0.47
CAST-205ENST00000348386 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
CAST-205ENST00000348386 PTPRGP23470 1445 aa12.11□□□□□ -0.47
CAST-205ENST00000348386 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
CAST-205ENST00000348386 VPS8Q8N3P4 1428 aa12.09□□□□□ -0.47
CAST-205ENST00000348386 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
CAST-205ENST00000348386 FMN1Q68DA7 1419 aa12.08□□□□□ -0.48
CAST-205ENST00000348386 CYB5RLQ6IPT4 315 aa12.07□□□□□ -0.48
CAST-205ENST00000348386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
CAST-205ENST00000348386 APLP2Q06481 763 aa12.06□□□□□ -0.48
CAST-205ENST00000348386 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
CAST-205ENST00000348386 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
CAST-205ENST00000348386 PLB1Q6P1J6 1458 aa12.05□□□□□ -0.48
CAST-205ENST00000348386 CASKIN1Q8WXD9 1431 aa12.01□□□□□ -0.49
CAST-205ENST00000348386 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
CAST-205ENST00000348386 ARXQ96QS3 562 aa12□□□□□ -0.49
CAST-205ENST00000348386 UACAQ9BZF9 1416 aa12□□□□□ -0.49
CAST-205ENST00000348386 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
CAST-205ENST00000348386 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
CAST-205ENST00000348386 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
CAST-205ENST00000348386 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
CAST-205ENST00000348386 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
CAST-205ENST00000348386 FYCO1Q9BQS8 1478 aa11.98□□□□□ -0.49
CAST-205ENST00000348386 KANK4Q5T7N3 995 aaPredicted RBP11.98□□□□□ -0.49
CAST-205ENST00000348386 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
CAST-205ENST00000348386 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
CAST-205ENST00000348386 ABCA8O94911 1581 aa11.96□□□□□ -0.49
CAST-205ENST00000348386 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
CAST-205ENST00000348386 CDK13Q14004 1512 aaKnown RBP11.95□□□□□ -0.5
CAST-205ENST00000348386 EPRSP07814 1512 aaKnown RBP11.94□□□□□ -0.5
CAST-205ENST00000348386 HECW1Q76N89 1606 aa11.94□□□□□ -0.5
CAST-205ENST00000348386 ABCC2Q92887 1545 aa11.93□□□□□ -0.5
CAST-205ENST00000348386 ATP10BO94823 1461 aa11.93□□□□□ -0.5
CAST-205ENST00000348386 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
CAST-205ENST00000348386 PLEKHD1A6NEE1 506 aa11.92□□□□□ -0.5
CAST-205ENST00000348386 CDK11AQ9UQ88 783 aaPredicted RBP11.92□□□□□ -0.5
CAST-205ENST00000348386 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
CAST-205ENST00000348386 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
CAST-205ENST00000348386 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
CAST-205ENST00000348386 UHRF1BP1LA0JNW5 1464 aa11.91□□□□□ -0.5
CAST-205ENST00000348386 CCDC18Q5T9S5 1454 aa11.91□□□□□ -0.5
CAST-205ENST00000348386 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
CAST-205ENST00000348386 TIAM1Q13009 1591 aa11.9□□□□□ -0.51
CAST-205ENST00000348386 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
CAST-205ENST00000348386 LRRIQ1Q96JM4 1722 aa11.87□□□□□ -0.51
CAST-205ENST00000348386 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
CAST-205ENST00000348386 KDM5BQ9UGL1 1544 aa11.87□□□□□ -0.51
CAST-205ENST00000348386 MAGI3Q5TCQ9 1506 aa11.85□□□□□ -0.51
CAST-205ENST00000348386 MAP3K1Q13233 1512 aa11.85□□□□□ -0.51
CAST-205ENST00000348386 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms