RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 CUX1P39880 1505 aa11.52□□□□□ -0.57
NLRP3-202ENST00000348069 HMGXB3Q12766 1538 aa11.51□□□□□ -0.57
NLRP3-202ENST00000348069 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
NLRP3-202ENST00000348069 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
NLRP3-202ENST00000348069 CLSPNQ9HAW4 1339 aa11.49□□□□□ -0.57
NLRP3-202ENST00000348069 PEG3Q9GZU2 1588 aa11.49□□□□□ -0.57
NLRP3-202ENST00000348069 SUPT16HQ9Y5B9 1047 aaKnown RBP11.48□□□□□ -0.57
NLRP3-202ENST00000348069 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
NLRP3-202ENST00000348069 FKBP8Q14318 412 aa11.45□□□□□ -0.58
NLRP3-202ENST00000348069 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
NLRP3-202ENST00000348069 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
NLRP3-202ENST00000348069 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
NLRP3-202ENST00000348069 MTUS2Q5JR59 1369 aa11.42□□□□□ -0.58
NLRP3-202ENST00000348069 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
NLRP3-202ENST00000348069 KIF21BO75037 1637 aa11.4□□□□□ -0.58
NLRP3-202ENST00000348069 RRP7BPQ9NSQ0 103 aa11.4□□□□□ -0.59
NLRP3-202ENST00000348069 TOPBP1Q92547 1522 aa11.4□□□□□ -0.59
NLRP3-202ENST00000348069 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
NLRP3-202ENST00000348069 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
NLRP3-202ENST00000348069 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
NLRP3-202ENST00000348069 TSHZ2Q9NRE2 1034 aa11.36□□□□□ -0.59
NLRP3-202ENST00000348069 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
NLRP3-202ENST00000348069 POLR3GLQ9BT43 218 aa11.35□□□□□ -0.59
NLRP3-202ENST00000348069 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
NLRP3-202ENST00000348069 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
NLRP3-202ENST00000348069 ZNF326Q5BKZ1 582 aaKnown RBP11.33□□□□□ -0.6
NLRP3-202ENST00000348069 HIRIP3Q9BW71 556 aaPredicted RBP11.33□□□□□ -0.6
NLRP3-202ENST00000348069 CDK11AQ9UQ88 783 aaPredicted RBP11.33□□□□□ -0.6
NLRP3-202ENST00000348069 ANP32CO43423 234 aa11.31□□□□□ -0.6
NLRP3-202ENST00000348069 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
NLRP3-202ENST00000348069 PRXQ9BXM0 1461 aa11.31□□□□□ -0.6
NLRP3-202ENST00000348069 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
NLRP3-202ENST00000348069 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
NLRP3-202ENST00000348069 PLEKHD1A6NEE1 506 aa11.27□□□□□ -0.6
NLRP3-202ENST00000348069 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.6
NLRP3-202ENST00000348069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.27□□□□□ -0.61
NLRP3-202ENST00000348069 SENP3Q9H4L4 574 aaPredicted RBP11.26□□□□□ -0.61
NLRP3-202ENST00000348069 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
NLRP3-202ENST00000348069 ARHGAP35Q9NRY4 1499 aa11.25□□□□□ -0.61
NLRP3-202ENST00000348069 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
NLRP3-202ENST00000348069 CCNB3Q8WWL7 1395 aa11.24□□□□□ -0.61
NLRP3-202ENST00000348069 FOXD1Q16676 465 aa11.23□□□□□ -0.61
NLRP3-202ENST00000348069 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
NLRP3-202ENST00000348069 FHAD1B1AJZ9 1412 aa11.22□□□□□ -0.61
NLRP3-202ENST00000348069 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
NLRP3-202ENST00000348069 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
NLRP3-202ENST00000348069 LAMC3Q9Y6N6 1575 aa11.21□□□□□ -0.61
NLRP3-202ENST00000348069 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.61
NLRP3-202ENST00000348069 ERICH3Q5RHP9 1530 aa11.2□□□□□ -0.62
NLRP3-202ENST00000348069 ZNF644Q9H582 1327 aaPredicted RBP11.2□□□□□ -0.62
NLRP3-202ENST00000348069 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
NLRP3-202ENST00000348069 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
NLRP3-202ENST00000348069 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
NLRP3-202ENST00000348069 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
NLRP3-202ENST00000348069 ANO8Q9HCE9 1232 aaPredicted RBP11.18□□□□□ -0.62
NLRP3-202ENST00000348069 SNAPC4Q5SXM2 1469 aa11.18□□□□□ -0.62
NLRP3-202ENST00000348069 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
NLRP3-202ENST00000348069 TSPY4P0CV99 314 aa11.17□□□□□ -0.62
NLRP3-202ENST00000348069 TSPY10P0CW01 314 aa11.17□□□□□ -0.62
NLRP3-202ENST00000348069 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
NLRP3-202ENST00000348069 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
NLRP3-202ENST00000348069 RTL5Q5HYW3 569 aaPredicted RBP11.15□□□□□ -0.63
NLRP3-202ENST00000348069 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
NLRP3-202ENST00000348069 HNRNPMP52272 730 aaKnown RBP eCLIP11.14□□□□□ -0.63
NLRP3-202ENST00000348069 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
NLRP3-202ENST00000348069 CYB5RLQ6IPT4 315 aa11.13□□□□□ -0.63
NLRP3-202ENST00000348069 DHX57Q6P158 1386 aaKnown RBP11.12□□□□□ -0.63
NLRP3-202ENST00000348069 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
NLRP3-202ENST00000348069 RAB3GAP2Q9H2M9 1393 aa11.11□□□□□ -0.63
NLRP3-202ENST00000348069 CARMIL2Q6F5E8 1435 aa11.11□□□□□ -0.63
NLRP3-202ENST00000348069 RGL3Q3MIN7 710 aa11.1□□□□□ -0.63
NLRP3-202ENST00000348069 KIF21AQ7Z4S6 1674 aa11.1□□□□□ -0.63
NLRP3-202ENST00000348069 NBR1Q14596 966 aa11.1□□□□□ -0.63
NLRP3-202ENST00000348069 PTPRGP23470 1445 aa11.09□□□□□ -0.63
NLRP3-202ENST00000348069 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
NLRP3-202ENST00000348069 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
NLRP3-202ENST00000348069 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
NLRP3-202ENST00000348069 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
NLRP3-202ENST00000348069 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
NLRP3-202ENST00000348069 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
NLRP3-202ENST00000348069 FAM9BQ8IZU0 186 aa11.05□□□□□ -0.64
NLRP3-202ENST00000348069 EIF5BO60841 1220 aaKnown RBP11.05□□□□□ -0.64
NLRP3-202ENST00000348069 LRRC9Q6ZRR7 1453 aa11.04□□□□□ -0.64
NLRP3-202ENST00000348069 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
NLRP3-202ENST00000348069 SETD5Q9C0A6 1442 aa11.03□□□□□ -0.64
NLRP3-202ENST00000348069 PLB1Q6P1J6 1458 aa11.02□□□□□ -0.64
NLRP3-202ENST00000348069 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.64
NLRP3-202ENST00000348069 ANP32AP39687 249 aaKnown RBP11.02□□□□□ -0.65
NLRP3-202ENST00000348069 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
NLRP3-202ENST00000348069 CCER2I3L3R5 266 aa11□□□□□ -0.65
NLRP3-202ENST00000348069 PRDM2Q13029 1718 aa11□□□□□ -0.65
NLRP3-202ENST00000348069 GRIN2AQ12879 1464 aa11□□□□□ -0.65
NLRP3-202ENST00000348069 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
NLRP3-202ENST00000348069 MAP3K1Q13233 1512 aa10.98□□□□□ -0.65
NLRP3-202ENST00000348069 DEKP35659 375 aaKnown RBP10.98□□□□□ -0.65
NLRP3-202ENST00000348069 PKD2Q13563 968 aa10.98□□□□□ -0.65
NLRP3-202ENST00000348069 NPM2Q86SE8 214 aaKnown RBP10.98□□□□□ -0.65
NLRP3-202ENST00000348069 MPHOSPH9Q99550 1183 aa10.98□□□□□ -0.65
NLRP3-202ENST00000348069 MLECQ14165 292 aa10.97□□□□□ -0.65
NLRP3-202ENST00000348069 B4GALNT3Q6L9W6 998 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms