RNA–Protein interactions for RNA: ENST00000347735.10

ERC1-201, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 4,955 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-201ENST00000347735 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
ERC1-201ENST00000347735 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
ERC1-201ENST00000347735 CCNB3Q8WWL7 1395 aa19.99■□□□□ 0.79
ERC1-201ENST00000347735 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
ERC1-201ENST00000347735 FHOD3Q2V2M9 1422 aa19.94■□□□□ 0.78
ERC1-201ENST00000347735 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
ERC1-201ENST00000347735 UNC13AQ9UPW8 1703 aa19.94■□□□□ 0.78
ERC1-201ENST00000347735 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
ERC1-201ENST00000347735 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
ERC1-201ENST00000347735 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
ERC1-201ENST00000347735 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
ERC1-201ENST00000347735 PLEKHD1A6NEE1 506 aa19.9■□□□□ 0.78
ERC1-201ENST00000347735 TSPY4P0CV99 314 aa19.89■□□□□ 0.78
ERC1-201ENST00000347735 TSPY10P0CW01 314 aa19.89■□□□□ 0.78
ERC1-201ENST00000347735 NESP48681 1621 aa19.89■□□□□ 0.77
ERC1-201ENST00000347735 CFDP1Q9UEE9 299 aaPredicted RBP19.88■□□□□ 0.77
ERC1-201ENST00000347735 IGF1RP08069 1367 aa19.86■□□□□ 0.77
ERC1-201ENST00000347735 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
ERC1-201ENST00000347735 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
ERC1-201ENST00000347735 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
ERC1-201ENST00000347735 CHGAP10645 457 aaKnown RBP19.8■□□□□ 0.76
ERC1-201ENST00000347735 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
ERC1-201ENST00000347735 CFTRP13569 1480 aa19.78■□□□□ 0.76
ERC1-201ENST00000347735 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERC1-201ENST00000347735 FOXD1Q16676 465 aa19.77■□□□□ 0.76
ERC1-201ENST00000347735 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
ERC1-201ENST00000347735 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
ERC1-201ENST00000347735 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 SENP3-EIF4A1A0A087X0R7 540 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 CUX1P39880 1505 aa19.73■□□□□ 0.75
ERC1-201ENST00000347735 KIF21BO75037 1637 aa19.7■□□□□ 0.74
ERC1-201ENST00000347735 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
ERC1-201ENST00000347735 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
ERC1-201ENST00000347735 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
ERC1-201ENST00000347735 FMN1Q68DA7 1419 aa19.67■□□□□ 0.74
ERC1-201ENST00000347735 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
ERC1-201ENST00000347735 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
ERC1-201ENST00000347735 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
ERC1-201ENST00000347735 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
ERC1-201ENST00000347735 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
ERC1-201ENST00000347735 EIF4G2P78344 907 aaKnown RBP eCLIP19.63■□□□□ 0.73
ERC1-201ENST00000347735 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
ERC1-201ENST00000347735 FKBP8Q14318 412 aa19.61■□□□□ 0.73
ERC1-201ENST00000347735 JPH4Q96JJ6 628 aa19.58■□□□□ 0.73
ERC1-201ENST00000347735 CLSPNQ9HAW4 1339 aa19.57■□□□□ 0.72
ERC1-201ENST00000347735 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
ERC1-201ENST00000347735 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
ERC1-201ENST00000347735 DHX57Q6P158 1386 aaKnown RBP19.54■□□□□ 0.72
ERC1-201ENST00000347735 IRX6P78412 446 aaPredicted RBP19.53■□□□□ 0.72
ERC1-201ENST00000347735 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.71
ERC1-201ENST00000347735 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
ERC1-201ENST00000347735 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
ERC1-201ENST00000347735 PHLDB1Q86UU1 1377 aa19.51■□□□□ 0.71
ERC1-201ENST00000347735 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
ERC1-201ENST00000347735 HNRNPMP52272 730 aaKnown RBP eCLIP19.48■□□□□ 0.715e-6■■■■□ 22
ERC1-201ENST00000347735 STAG3Q9UJ98 1225 aa19.48■□□□□ 0.71
ERC1-201ENST00000347735 MPHOSPH9Q99550 1183 aa19.47■□□□□ 0.71
ERC1-201ENST00000347735 PKD2Q13563 968 aa19.46■□□□□ 0.71
ERC1-201ENST00000347735 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
ERC1-201ENST00000347735 CARD11Q9BXL7 1154 aa19.45■□□□□ 0.7
ERC1-201ENST00000347735 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
ERC1-201ENST00000347735 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
ERC1-201ENST00000347735 DCAF11Q8TEB1 546 aa19.43■□□□□ 0.7
ERC1-201ENST00000347735 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
ERC1-201ENST00000347735 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.7
ERC1-201ENST00000347735 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
ERC1-201ENST00000347735 LRRC9Q6ZRR7 1453 aa19.38■□□□□ 0.69
ERC1-201ENST00000347735 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
ERC1-201ENST00000347735 NUP155O75694 1391 aa19.34■□□□□ 0.69
ERC1-201ENST00000347735 CCDC18Q5T9S5 1454 aa19.33■□□□□ 0.68
ERC1-201ENST00000347735 BCL11AQ9H165 835 aa19.33■□□□□ 0.68
ERC1-201ENST00000347735 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
ERC1-201ENST00000347735 FGD6Q6ZV73 1430 aa19.29■□□□□ 0.68
ERC1-201ENST00000347735 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 CASKIN1Q8WXD9 1431 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 GRIN2BQ13224 1484 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 PTPRGP23470 1445 aa19.27■□□□□ 0.68
ERC1-201ENST00000347735 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.67
ERC1-201ENST00000347735 PRDM2Q13029 1718 aa19.27■□□□□ 0.67
ERC1-201ENST00000347735 GGT6Q6P531 493 aa19.25■□□□□ 0.67
ERC1-201ENST00000347735 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
ERC1-201ENST00000347735 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
ERC1-201ENST00000347735 DAXXQ9UER7 740 aaPredicted RBP19.24■□□□□ 0.67
ERC1-201ENST00000347735 NCOA2Q15596 1464 aa19.23■□□□□ 0.67
ERC1-201ENST00000347735 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
ERC1-201ENST00000347735 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
ERC1-201ENST00000347735 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
ERC1-201ENST00000347735 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
ERC1-201ENST00000347735 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
ERC1-201ENST00000347735 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
ERC1-201ENST00000347735 MLECQ14165 292 aa19.2■□□□□ 0.66
ERC1-201ENST00000347735 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
ERC1-201ENST00000347735 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
ERC1-201ENST00000347735 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
ERC1-201ENST00000347735 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
ERC1-201ENST00000347735 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
ERC1-201ENST00000347735 FYCO1Q9BQS8 1478 aa19.16■□□□□ 0.66
ERC1-201ENST00000347735 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
ERC1-201ENST00000347735 TIAM1Q13009 1591 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms