RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
LRP8-202ENST00000347547 CCER2I3L3R5 266 aa22.18■■□□□ 1.14
LRP8-202ENST00000347547 FANCIQ9NVI1 1328 aa22.17■■□□□ 1.14
LRP8-202ENST00000347547 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
LRP8-202ENST00000347547 PRXQ9BXM0 1461 aa22.16■■□□□ 1.14
LRP8-202ENST00000347547 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
LRP8-202ENST00000347547 MSH5O43196 834 aa22.15■■□□□ 1.14
LRP8-202ENST00000347547 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
LRP8-202ENST00000347547 PPP1R15AO75807 674 aaPredicted RBP22.13■■□□□ 1.13
LRP8-202ENST00000347547 FGD5Q6ZNL6 1462 aa22.13■■□□□ 1.13
LRP8-202ENST00000347547 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
LRP8-202ENST00000347547 RAB3GAP2Q9H2M9 1393 aa22.09■■□□□ 1.13
LRP8-202ENST00000347547 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
LRP8-202ENST00000347547 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
LRP8-202ENST00000347547 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
LRP8-202ENST00000347547 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
LRP8-202ENST00000347547 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
LRP8-202ENST00000347547 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
LRP8-202ENST00000347547 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
LRP8-202ENST00000347547 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
LRP8-202ENST00000347547 ITGAEP38570 1179 aa22.01■■□□□ 1.11
LRP8-202ENST00000347547 SETD5Q9C0A6 1442 aa21.99■■□□□ 1.11
LRP8-202ENST00000347547 MAP3K1Q13233 1512 aa21.98■■□□□ 1.11
LRP8-202ENST00000347547 ANP32CO43423 234 aa21.97■■□□□ 1.11
LRP8-202ENST00000347547 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
LRP8-202ENST00000347547 TRIM52Q96A61 297 aa21.94■■□□□ 1.1
LRP8-202ENST00000347547 CDK11AQ9UQ88 783 aaPredicted RBP21.93■■□□□ 1.1
LRP8-202ENST00000347547 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
LRP8-202ENST00000347547 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
LRP8-202ENST00000347547 ERICH6BQ5W0A0 696 aa21.91■■□□□ 1.1
LRP8-202ENST00000347547 ERICH6Q7L0X2 663 aa21.91■■□□□ 1.1
LRP8-202ENST00000347547 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
LRP8-202ENST00000347547 IGF1RP08069 1367 aa21.87■■□□□ 1.09
LRP8-202ENST00000347547 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
LRP8-202ENST00000347547 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.09
LRP8-202ENST00000347547 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.09
LRP8-202ENST00000347547 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.08
LRP8-202ENST00000347547 WDR62O43379 1518 aa21.78■■□□□ 1.08
LRP8-202ENST00000347547 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.08
LRP8-202ENST00000347547 PRKCSHP14314 528 aaPredicted RBP21.75■■□□□ 1.07
LRP8-202ENST00000347547 DEKP35659 375 aaKnown RBP21.75■■□□□ 1.07
LRP8-202ENST00000347547 CUL7Q14999 1698 aa21.74■■□□□ 1.07
LRP8-202ENST00000347547 PPP4R2Q9NY27 417 aa21.73■■□□□ 1.07
LRP8-202ENST00000347547 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
LRP8-202ENST00000347547 PHLDB1Q86UU1 1377 aa21.72■■□□□ 1.07
LRP8-202ENST00000347547 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
LRP8-202ENST00000347547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.7■■□□□ 1.065e-10■■■■■ 69.7
LRP8-202ENST00000347547 HNRNPUQ00839 825 aaKnown RBP eCLIP21.68■■□□□ 1.06
LRP8-202ENST00000347547 CFAP43Q8NDM7 1665 aa21.67■■□□□ 1.06
LRP8-202ENST00000347547 HIRIP3Q9BW71 556 aaPredicted RBP21.67■■□□□ 1.06
LRP8-202ENST00000347547 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
LRP8-202ENST00000347547 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.05
LRP8-202ENST00000347547 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
LRP8-202ENST00000347547 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
LRP8-202ENST00000347547 TONSLQ96HA7 1378 aa21.62■■□□□ 1.05
LRP8-202ENST00000347547 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
LRP8-202ENST00000347547 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
LRP8-202ENST00000347547 FAM50AQ14320 339 aaKnown RBP21.59■■□□□ 1.05
LRP8-202ENST00000347547 NOP58Q9Y2X3 529 aaKnown RBP21.59■■□□□ 1.05
LRP8-202ENST00000347547 IFT140Q96RY7 1462 aa21.58■■□□□ 1.04
LRP8-202ENST00000347547 CTTNBP2Q8WZ74 1663 aa21.57■■□□□ 1.04
LRP8-202ENST00000347547 KDM5BQ9UGL1 1544 aa21.54■■□□□ 1.04
LRP8-202ENST00000347547 UACAQ9BZF9 1416 aa21.52■■□□□ 1.04
LRP8-202ENST00000347547 NCOA2Q15596 1464 aa21.52■■□□□ 1.04
LRP8-202ENST00000347547 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
LRP8-202ENST00000347547 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
LRP8-202ENST00000347547 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.036e-7■■■■□ 26.7
LRP8-202ENST00000347547 PCF11O94913 1555 aaKnown RBP21.5■■□□□ 1.03
LRP8-202ENST00000347547 CCDC18Q5T9S5 1454 aa21.49■■□□□ 1.03
LRP8-202ENST00000347547 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
LRP8-202ENST00000347547 HFM1A2PYH4 1435 aa21.47■■□□□ 1.03
LRP8-202ENST00000347547 ZBED9Q6R2W3 1325 aa21.46■■□□□ 1.03
LRP8-202ENST00000347547 GRIN2BQ13224 1484 aa21.45■■□□□ 1.02
LRP8-202ENST00000347547 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
LRP8-202ENST00000347547 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
LRP8-202ENST00000347547 CNTLNQ9NXG0 1405 aa21.44■■□□□ 1.02
LRP8-202ENST00000347547 B4GALNT3Q6L9W6 998 aa21.44■■□□□ 1.02
LRP8-202ENST00000347547 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
LRP8-202ENST00000347547 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
LRP8-202ENST00000347547 FGD6Q6ZV73 1430 aa21.4■■□□□ 1.02
LRP8-202ENST00000347547 EFCAB5A4FU69 1503 aa21.39■■□□□ 1.01
LRP8-202ENST00000347547 NBR1Q14596 966 aa21.38■■□□□ 1.01
LRP8-202ENST00000347547 CASKIN1Q8WXD9 1431 aa21.37■■□□□ 1.01
LRP8-202ENST00000347547 IPO9Q96P70 1041 aaKnown RBP21.37■■□□□ 1.01
LRP8-202ENST00000347547 P3H3Q8IVL6 736 aa21.36■■□□□ 1.01
LRP8-202ENST00000347547 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
LRP8-202ENST00000347547 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
LRP8-202ENST00000347547 ANP32AP39687 249 aaKnown RBP21.34■■□□□ 1.01
LRP8-202ENST00000347547 CCDC184Q52MB2 194 aa21.33■■□□□ 1.01
LRP8-202ENST00000347547 PRKRIP1Q9H875 184 aaPredicted RBP21.33■■□□□ 1.01
LRP8-202ENST00000347547 NAIPQ13075 1403 aa21.33■■□□□ 1.01
LRP8-202ENST00000347547 RTL5Q5HYW3 569 aaPredicted RBP21.32■■□□□ 1
LRP8-202ENST00000347547 ANO8Q9HCE9 1232 aaPredicted RBP21.32■■□□□ 1
LRP8-202ENST00000347547 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
LRP8-202ENST00000347547 PTPRKQ15262 1439 aa21.32■■□□□ 1
LRP8-202ENST00000347547 SMG6Q86US8 1419 aaKnown RBP21.32■■□□□ 1
LRP8-202ENST00000347547 NCOA1Q15788 1441 aa21.31■■□□□ 1
LRP8-202ENST00000347547 RNF123Q5XPI4 1314 aa21.31■■□□□ 1
LRP8-202ENST00000347547 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
LRP8-202ENST00000347547 EIF4G2P78344 907 aaKnown RBP eCLIP21.3■■□□□ 14e-7■■■■□ 23.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms