RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 RAB3GAP2Q9H2M9 1393 aa27.84■■■□□ 2.05
LYSMD4-202ENST00000344791 PHLDB1Q86UU1 1377 aa27.81■■■□□ 2.04
LYSMD4-202ENST00000344791 FHOD3Q2V2M9 1422 aa27.8■■■□□ 2.04
LYSMD4-202ENST00000344791 TIAM1Q13009 1591 aa27.78■■■□□ 2.04
LYSMD4-202ENST00000344791 LRRC9Q6ZRR7 1453 aa27.74■■■□□ 2.03
LYSMD4-202ENST00000344791 SIN3AQ96ST3 1273 aa27.73■■■□□ 2.03
LYSMD4-202ENST00000344791 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
LYSMD4-202ENST00000344791 PCF11O94913 1555 aaKnown RBP27.67■■■□□ 2.02
LYSMD4-202ENST00000344791 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
LYSMD4-202ENST00000344791 DNAJC5BQ9UF47 199 aa27.66■■■□□ 2.02
LYSMD4-202ENST00000344791 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
LYSMD4-202ENST00000344791 SETD5Q9C0A6 1442 aa27.64■■■□□ 2.02
LYSMD4-202ENST00000344791 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
LYSMD4-202ENST00000344791 HIRIP3Q9BW71 556 aaPredicted RBP27.6■■■□□ 2.01
LYSMD4-202ENST00000344791 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
LYSMD4-202ENST00000344791 MAPKBP1O60336 1514 aa27.59■■■□□ 2.01
LYSMD4-202ENST00000344791 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
LYSMD4-202ENST00000344791 KCNH8Q96L42 1107 aa27.56■■■□□ 2
LYSMD4-202ENST00000344791 MAP3K1Q13233 1512 aa27.53■■■□□ 2
LYSMD4-202ENST00000344791 DDX10Q13206 875 aaKnown RBP27.49■■□□□ 1.99
LYSMD4-202ENST00000344791 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
LYSMD4-202ENST00000344791 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
LYSMD4-202ENST00000344791 ARID3CA6NKF2 412 aa27.44■■□□□ 1.98
LYSMD4-202ENST00000344791 CFAP43Q8NDM7 1665 aa27.43■■□□□ 1.98
LYSMD4-202ENST00000344791 CASKIN1Q8WXD9 1431 aa27.43■■□□□ 1.98
LYSMD4-202ENST00000344791 FYCO1Q9BQS8 1478 aa27.42■■□□□ 1.98
LYSMD4-202ENST00000344791 WDR97A6NE52 1622 aa27.42■■□□□ 1.98
LYSMD4-202ENST00000344791 FMN1Q68DA7 1419 aa27.36■■□□□ 1.97
LYSMD4-202ENST00000344791 EFCAB5A4FU69 1503 aa27.35■■□□□ 1.97
LYSMD4-202ENST00000344791 CUL7Q14999 1698 aa27.34■■□□□ 1.97
LYSMD4-202ENST00000344791 GAPVD1Q14C86 1478 aa27.33■■□□□ 1.97
LYSMD4-202ENST00000344791 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
LYSMD4-202ENST00000344791 CTTNBP2Q8WZ74 1663 aa27.33■■□□□ 1.97
LYSMD4-202ENST00000344791 CHIC2Q9UKJ5 165 aa27.31■■□□□ 1.96
LYSMD4-202ENST00000344791 SUPT16HQ9Y5B9 1047 aaKnown RBP27.28■■□□□ 1.96
LYSMD4-202ENST00000344791 SNAPC4Q5SXM2 1469 aa27.28■■□□□ 1.96
LYSMD4-202ENST00000344791 PTPRKQ15262 1439 aa27.27■■□□□ 1.96
LYSMD4-202ENST00000344791 PPP1R15AO75807 674 aaPredicted RBP27.25■■□□□ 1.95
LYSMD4-202ENST00000344791 RRP7BPQ9NSQ0 103 aa27.25■■□□□ 1.95
LYSMD4-202ENST00000344791 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
LYSMD4-202ENST00000344791 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.95
LYSMD4-202ENST00000344791 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
LYSMD4-202ENST00000344791 TONSLQ96HA7 1378 aa27.23■■□□□ 1.95
LYSMD4-202ENST00000344791 CCDC18Q5T9S5 1454 aa27.21■■□□□ 1.95
LYSMD4-202ENST00000344791 NCOA2Q15596 1464 aa27.19■■□□□ 1.94
LYSMD4-202ENST00000344791 ABCA5Q8WWZ7 1642 aa27.17■■□□□ 1.94
LYSMD4-202ENST00000344791 BCANQ96GW7 911 aa27.15■■□□□ 1.94
LYSMD4-202ENST00000344791 TRIM52Q96A61 297 aa27.14■■□□□ 1.94
LYSMD4-202ENST00000344791 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.93
LYSMD4-202ENST00000344791 LRRIQ1Q96JM4 1722 aa27.13■■□□□ 1.93
LYSMD4-202ENST00000344791 MYOM3Q5VTT5 1437 aa27.13■■□□□ 1.93
LYSMD4-202ENST00000344791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.12■■□□□ 1.93
LYSMD4-202ENST00000344791 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
LYSMD4-202ENST00000344791 SAMD9Q5K651 1589 aa27.1■■□□□ 1.93
LYSMD4-202ENST00000344791 TIMELESSQ9UNS1 1208 aa27.09■■□□□ 1.93
LYSMD4-202ENST00000344791 HFM1A2PYH4 1435 aa27.09■■□□□ 1.93
LYSMD4-202ENST00000344791 NAIPQ13075 1403 aa27.07■■□□□ 1.92
LYSMD4-202ENST00000344791 ANP32CO43423 234 aa27.06■■□□□ 1.92
LYSMD4-202ENST00000344791 UACAQ9BZF9 1416 aa27.05■■□□□ 1.92
LYSMD4-202ENST00000344791 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
LYSMD4-202ENST00000344791 PTPN23Q9H3S7 1636 aa27.04■■□□□ 1.92
LYSMD4-202ENST00000344791 FOXD1Q16676 465 aa27.03■■□□□ 1.92
LYSMD4-202ENST00000344791 SUPT6HQ7KZ85 1726 aaKnown RBP27■■□□□ 1.91
LYSMD4-202ENST00000344791 CDK13Q14004 1512 aaKnown RBP26.99■■□□□ 1.91
LYSMD4-202ENST00000344791 EHBP1L1Q8N3D4 1523 aa26.97■■□□□ 1.91
LYSMD4-202ENST00000344791 TARBP1Q13395 1621 aaKnown RBP26.97■■□□□ 1.91
LYSMD4-202ENST00000344791 FKBP8Q14318 412 aa26.96■■□□□ 1.91
LYSMD4-202ENST00000344791 UGGT2Q9NYU1 1516 aa26.92■■□□□ 1.9
LYSMD4-202ENST00000344791 EPRSP07814 1512 aaKnown RBP26.9■■□□□ 1.9
LYSMD4-202ENST00000344791 IQGAP2Q13576 1575 aa26.88■■□□□ 1.89
LYSMD4-202ENST00000344791 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
LYSMD4-202ENST00000344791 ZNF644Q9H582 1327 aaPredicted RBP26.88■■□□□ 1.89
LYSMD4-202ENST00000344791 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
LYSMD4-202ENST00000344791 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
LYSMD4-202ENST00000344791 FBLN2P98095 1184 aa26.84■■□□□ 1.89
LYSMD4-202ENST00000344791 MPHOSPH9Q99550 1183 aa26.84■■□□□ 1.89
LYSMD4-202ENST00000344791 KDM6BO15054 1643 aa26.83■■□□□ 1.89
LYSMD4-202ENST00000344791 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
LYSMD4-202ENST00000344791 HSPA5P11021 654 aaKnown RBP26.83■■□□□ 1.89
LYSMD4-202ENST00000344791 CCER2I3L3R5 266 aa26.8■■□□□ 1.88
LYSMD4-202ENST00000344791 L3MBTL2Q969R5 705 aa26.79■■□□□ 1.88
LYSMD4-202ENST00000344791 ADAMTS12P58397 1594 aa26.79■■□□□ 1.88
LYSMD4-202ENST00000344791 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
LYSMD4-202ENST00000344791 TSHZ2Q9NRE2 1034 aa26.78■■□□□ 1.88
LYSMD4-202ENST00000344791 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
LYSMD4-202ENST00000344791 ZNF777Q9ULD5 760 aaPredicted RBP26.77■■□□□ 1.88
LYSMD4-202ENST00000344791 NEFLP07196 543 aa26.76■■□□□ 1.87
LYSMD4-202ENST00000344791 DENND4BO75064 1496 aaPredicted RBP26.76■■□□□ 1.87
LYSMD4-202ENST00000344791 WASHC2AQ641Q2 1341 aa26.75■■□□□ 1.87
LYSMD4-202ENST00000344791 CNGB1Q14028 1251 aaPredicted RBP26.74■■□□□ 1.87
LYSMD4-202ENST00000344791 HNRNPUQ00839 825 aaKnown RBP eCLIP26.73■■□□□ 1.87
LYSMD4-202ENST00000344791 KDM5BQ9UGL1 1544 aa26.73■■□□□ 1.87
LYSMD4-202ENST00000344791 WDR62O43379 1518 aa26.72■■□□□ 1.87
LYSMD4-202ENST00000344791 TCOF1Q13428 1488 aaKnown RBP26.72■■□□□ 1.87
LYSMD4-202ENST00000344791 EIF4G2P78344 907 aaKnown RBP eCLIP26.72■■□□□ 1.87
LYSMD4-202ENST00000344791 SLC4A1APQ9BWU0 796 aaKnown RBP26.7■■□□□ 1.86
LYSMD4-202ENST00000344791 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
LYSMD4-202ENST00000344791 IRX6P78412 446 aaPredicted RBP26.66■■□□□ 1.86
LYSMD4-202ENST00000344791 MIA2Q96PC5 1412 aa26.66■■□□□ 1.86
LYSMD4-202ENST00000344791 C11orf95C9JLR9 678 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms