RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 WDR97A6NE52 1622 aa23.68■■□□□ 1.38
EGFR-203ENST00000344576 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
EGFR-203ENST00000344576 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
EGFR-203ENST00000344576 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
EGFR-203ENST00000344576 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
EGFR-203ENST00000344576 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.37
EGFR-203ENST00000344576 P3H3Q8IVL6 736 aa23.58■■□□□ 1.37
EGFR-203ENST00000344576 APLP2Q06481 763 aa23.56■■□□□ 1.36
EGFR-203ENST00000344576 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
EGFR-203ENST00000344576 AQRO60306 1485 aaKnown RBP eCLIP23.54■■□□□ 1.36
EGFR-203ENST00000344576 SUPT16HQ9Y5B9 1047 aaKnown RBP23.52■■□□□ 1.36
EGFR-203ENST00000344576 CUL7Q14999 1698 aa23.52■■□□□ 1.35
EGFR-203ENST00000344576 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
EGFR-203ENST00000344576 ZNF608Q9ULD9 1512 aaPredicted RBP23.47■■□□□ 1.35
EGFR-203ENST00000344576 DHX57Q6P158 1386 aaKnown RBP23.46■■□□□ 1.35
EGFR-203ENST00000344576 WDR62O43379 1518 aa23.44■■□□□ 1.34
EGFR-203ENST00000344576 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
EGFR-203ENST00000344576 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
EGFR-203ENST00000344576 CTTNBP2Q8WZ74 1663 aa23.39■■□□□ 1.34
EGFR-203ENST00000344576 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
EGFR-203ENST00000344576 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
EGFR-203ENST00000344576 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
EGFR-203ENST00000344576 TSHZ2Q9NRE2 1034 aa23.31■■□□□ 1.32
EGFR-203ENST00000344576 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
EGFR-203ENST00000344576 CLSPNQ9HAW4 1339 aa23.3■■□□□ 1.32
EGFR-203ENST00000344576 KCNH8Q96L42 1107 aa23.29■■□□□ 1.32
EGFR-203ENST00000344576 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
EGFR-203ENST00000344576 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
EGFR-203ENST00000344576 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
EGFR-203ENST00000344576 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
EGFR-203ENST00000344576 ITGAEP38570 1179 aa23.25■■□□□ 1.31
EGFR-203ENST00000344576 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
EGFR-203ENST00000344576 EFCAB5A4FU69 1503 aa23.21■■□□□ 1.31
EGFR-203ENST00000344576 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
EGFR-203ENST00000344576 BCANQ96GW7 911 aa23.17■■□□□ 1.3
EGFR-203ENST00000344576 FBLN2P98095 1184 aa23.15■■□□□ 1.3
EGFR-203ENST00000344576 SAMD9Q5K651 1589 aa23.15■■□□□ 1.3
EGFR-203ENST00000344576 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
EGFR-203ENST00000344576 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
EGFR-203ENST00000344576 LRRC9Q6ZRR7 1453 aa23.11■■□□□ 1.29
EGFR-203ENST00000344576 ANP32EQ9BTT0 268 aa23.1■■□□□ 1.29
EGFR-203ENST00000344576 FYCO1Q9BQS8 1478 aa23.09■■□□□ 1.29
EGFR-203ENST00000344576 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
EGFR-203ENST00000344576 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.29
EGFR-203ENST00000344576 ARID3CA6NKF2 412 aa23.08■■□□□ 1.29
EGFR-203ENST00000344576 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
EGFR-203ENST00000344576 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
EGFR-203ENST00000344576 PHLDB1Q86UU1 1377 aa23.05■■□□□ 1.28
EGFR-203ENST00000344576 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
EGFR-203ENST00000344576 CCNB3Q8WWL7 1395 aa23.05■■□□□ 1.28
EGFR-203ENST00000344576 LRRIQ1Q96JM4 1722 aa23.04■■□□□ 1.28
EGFR-203ENST00000344576 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
EGFR-203ENST00000344576 MAPKBP1O60336 1514 aa23.01■■□□□ 1.27
EGFR-203ENST00000344576 FKBP8Q14318 412 aa23■■□□□ 1.27
EGFR-203ENST00000344576 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
EGFR-203ENST00000344576 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
EGFR-203ENST00000344576 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
EGFR-203ENST00000344576 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
EGFR-203ENST00000344576 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
EGFR-203ENST00000344576 FAM50AQ14320 339 aaKnown RBP22.95■■□□□ 1.26
EGFR-203ENST00000344576 KIAA0586Q9BVV6 1533 aa22.94■■□□□ 1.26
EGFR-203ENST00000344576 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
EGFR-203ENST00000344576 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
EGFR-203ENST00000344576 DISP1Q96F81 1524 aa22.91■■□□□ 1.26
EGFR-203ENST00000344576 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
EGFR-203ENST00000344576 HIRIP3Q9BW71 556 aaPredicted RBP22.91■■□□□ 1.26
EGFR-203ENST00000344576 KIAA0556O60303 1618 aa22.89■■□□□ 1.25
EGFR-203ENST00000344576 CDK13Q14004 1512 aaKnown RBP22.88■■□□□ 1.25
EGFR-203ENST00000344576 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
EGFR-203ENST00000344576 TRIM52Q96A61 297 aa22.83■■□□□ 1.25
EGFR-203ENST00000344576 HECW1Q76N89 1606 aa22.82■■□□□ 1.24
EGFR-203ENST00000344576 BCL11AQ9H165 835 aa22.81■■□□□ 1.24
EGFR-203ENST00000344576 NUP160Q12769 1436 aa22.8■■□□□ 1.24
EGFR-203ENST00000344576 EPRSP07814 1512 aaKnown RBP22.8■■□□□ 1.24
EGFR-203ENST00000344576 SETD5Q9C0A6 1442 aa22.79■■□□□ 1.24
EGFR-203ENST00000344576 NCOA2Q15596 1464 aa22.79■■□□□ 1.24
EGFR-203ENST00000344576 PPP1R15AO75807 674 aaPredicted RBP22.78■■□□□ 1.24
EGFR-203ENST00000344576 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
EGFR-203ENST00000344576 RBM19Q9Y4C8 960 aaKnown RBP22.78■■□□□ 1.24
EGFR-203ENST00000344576 FGD6Q6ZV73 1430 aa22.75■■□□□ 1.23
EGFR-203ENST00000344576 EHBP1L1Q8N3D4 1523 aa22.74■■□□□ 1.23
EGFR-203ENST00000344576 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
EGFR-203ENST00000344576 PLB1Q6P1J6 1458 aa22.74■■□□□ 1.23
EGFR-203ENST00000344576 CHD1O14646 1710 aa22.73■■□□□ 1.23
EGFR-203ENST00000344576 NEFLP07196 543 aa22.72■■□□□ 1.23
EGFR-203ENST00000344576 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
EGFR-203ENST00000344576 SUPT6HQ7KZ85 1726 aaKnown RBP22.72■■□□□ 1.23
EGFR-203ENST00000344576 RAPGEF6Q8TEU7 1601 aa22.7■■□□□ 1.22
EGFR-203ENST00000344576 MYOM3Q5VTT5 1437 aa22.67■■□□□ 1.22
EGFR-203ENST00000344576 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
EGFR-203ENST00000344576 PTPRKQ15262 1439 aa22.64■■□□□ 1.22
EGFR-203ENST00000344576 ANP32CO43423 234 aa22.63■■□□□ 1.21
EGFR-203ENST00000344576 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
EGFR-203ENST00000344576 PRG4Q92954 1404 aaPredicted RBP22.61■■□□□ 1.21
EGFR-203ENST00000344576 CCER2I3L3R5 266 aa22.6■■□□□ 1.21
EGFR-203ENST00000344576 MSH5O43196 834 aa22.6■■□□□ 1.21
EGFR-203ENST00000344576 PTPN23Q9H3S7 1636 aa22.59■■□□□ 1.21
EGFR-203ENST00000344576 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
EGFR-203ENST00000344576 IRX6P78412 446 aaPredicted RBP22.56■■□□□ 1.2
EGFR-203ENST00000344576 ERCC6L2Q5T890 1561 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms