RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 TDRD9Q8NDG6 1382 aaKnown RBP17.55■□□□□ 0.4
TMEM220-201ENST00000341871 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
TMEM220-201ENST00000341871 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
TMEM220-201ENST00000341871 ARHGAP35Q9NRY4 1499 aa17.52■□□□□ 0.39
TMEM220-201ENST00000341871 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
TMEM220-201ENST00000341871 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
TMEM220-201ENST00000341871 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
TMEM220-201ENST00000341871 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
TMEM220-201ENST00000341871 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
TMEM220-201ENST00000341871 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
TMEM220-201ENST00000341871 SIN3AQ96ST3 1273 aa17.42■□□□□ 0.38
TMEM220-201ENST00000341871 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
TMEM220-201ENST00000341871 BCANQ96GW7 911 aa17.39■□□□□ 0.37
TMEM220-201ENST00000341871 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
TMEM220-201ENST00000341871 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
TMEM220-201ENST00000341871 FBLN2P98095 1184 aa17.34■□□□□ 0.37
TMEM220-201ENST00000341871 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
TMEM220-201ENST00000341871 TOPBP1Q92547 1522 aa17.33■□□□□ 0.36
TMEM220-201ENST00000341871 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
TMEM220-201ENST00000341871 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
TMEM220-201ENST00000341871 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
TMEM220-201ENST00000341871 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
TMEM220-201ENST00000341871 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
TMEM220-201ENST00000341871 RRBP1Q9P2E9 1410 aaKnown RBP17.23■□□□□ 0.35
TMEM220-201ENST00000341871 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
TMEM220-201ENST00000341871 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
TMEM220-201ENST00000341871 LRRC9Q6ZRR7 1453 aa17.21■□□□□ 0.35
TMEM220-201ENST00000341871 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.35
TMEM220-201ENST00000341871 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.34
TMEM220-201ENST00000341871 KCNH8Q96L42 1107 aa17.21■□□□□ 0.34
TMEM220-201ENST00000341871 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
TMEM220-201ENST00000341871 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
TMEM220-201ENST00000341871 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
TMEM220-201ENST00000341871 PDS5BQ9NTI5 1447 aa17.18■□□□□ 0.34
TMEM220-201ENST00000341871 RBM19Q9Y4C8 960 aaKnown RBP17.18■□□□□ 0.34
TMEM220-201ENST00000341871 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
TMEM220-201ENST00000341871 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
TMEM220-201ENST00000341871 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
TMEM220-201ENST00000341871 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
TMEM220-201ENST00000341871 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
TMEM220-201ENST00000341871 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
TMEM220-201ENST00000341871 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
TMEM220-201ENST00000341871 CNGB1Q14028 1251 aaPredicted RBP17.14■□□□□ 0.34
TMEM220-201ENST00000341871 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
TMEM220-201ENST00000341871 FOXD1Q16676 465 aa17.12■□□□□ 0.33
TMEM220-201ENST00000341871 UBE2Q2Q8WVN8 375 aa17.11■□□□□ 0.33
TMEM220-201ENST00000341871 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
TMEM220-201ENST00000341871 CLSPNQ9HAW4 1339 aa17.09■□□□□ 0.33
TMEM220-201ENST00000341871 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
TMEM220-201ENST00000341871 FMN1Q68DA7 1419 aa17.04■□□□□ 0.32
TMEM220-201ENST00000341871 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
TMEM220-201ENST00000341871 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
TMEM220-201ENST00000341871 FKBP8Q14318 412 aa17.01■□□□□ 0.31
TMEM220-201ENST00000341871 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
TMEM220-201ENST00000341871 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
TMEM220-201ENST00000341871 LAMC3Q9Y6N6 1575 aa17■□□□□ 0.31
TMEM220-201ENST00000341871 ZNF644Q9H582 1327 aaPredicted RBP17■□□□□ 0.31
TMEM220-201ENST00000341871 MSH5O43196 834 aa17■□□□□ 0.31
TMEM220-201ENST00000341871 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
TMEM220-201ENST00000341871 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
TMEM220-201ENST00000341871 PTPRKQ15262 1439 aa16.99■□□□□ 0.31
TMEM220-201ENST00000341871 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
TMEM220-201ENST00000341871 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
TMEM220-201ENST00000341871 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
TMEM220-201ENST00000341871 FYCO1Q9BQS8 1478 aa16.97■□□□□ 0.31
TMEM220-201ENST00000341871 NBR1Q14596 966 aa16.97■□□□□ 0.31
TMEM220-201ENST00000341871 POLR3GLQ9BT43 218 aa16.96■□□□□ 0.31
TMEM220-201ENST00000341871 ZNF326Q5BKZ1 582 aaKnown RBP16.96■□□□□ 0.31
TMEM220-201ENST00000341871 NCOA2Q15596 1464 aa16.95■□□□□ 0.3
TMEM220-201ENST00000341871 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
TMEM220-201ENST00000341871 PKNOX2Q96KN3 472 aa16.93■□□□□ 0.3
TMEM220-201ENST00000341871 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
TMEM220-201ENST00000341871 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
TMEM220-201ENST00000341871 NEFLP07196 543 aa16.92■□□□□ 0.3
TMEM220-201ENST00000341871 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
TMEM220-201ENST00000341871 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
TMEM220-201ENST00000341871 CCDC18Q5T9S5 1454 aa16.9■□□□□ 0.3
TMEM220-201ENST00000341871 CUL7Q14999 1698 aa16.9■□□□□ 0.3
TMEM220-201ENST00000341871 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
TMEM220-201ENST00000341871 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
TMEM220-201ENST00000341871 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
TMEM220-201ENST00000341871 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
TMEM220-201ENST00000341871 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
TMEM220-201ENST00000341871 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
TMEM220-201ENST00000341871 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
TMEM220-201ENST00000341871 MRC2Q9UBG0 1479 aa16.84■□□□□ 0.29
TMEM220-201ENST00000341871 ANP32CO43423 234 aa16.84■□□□□ 0.29
TMEM220-201ENST00000341871 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
TMEM220-201ENST00000341871 MAGI3Q5TCQ9 1506 aa16.83■□□□□ 0.28
TMEM220-201ENST00000341871 CFAP43Q8NDM7 1665 aa16.83■□□□□ 0.28
TMEM220-201ENST00000341871 PODXL2Q9NZ53 605 aa16.83■□□□□ 0.28
TMEM220-201ENST00000341871 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
TMEM220-201ENST00000341871 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
TMEM220-201ENST00000341871 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
TMEM220-201ENST00000341871 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
TMEM220-201ENST00000341871 NAIPQ13075 1403 aa16.81■□□□□ 0.28
TMEM220-201ENST00000341871 CDK11AQ9UQ88 783 aaPredicted RBP16.79■□□□□ 0.28
TMEM220-201ENST00000341871 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
TMEM220-201ENST00000341871 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
TMEM220-201ENST00000341871 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms