RNA–Protein interactions for RNA: ENST00000341464.9

ZKSCAN3-202, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

TSL 2 BASIC

Gene ZKSCAN3, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-202ENST00000341464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
ZKSCAN3-202ENST00000341464 VPS8Q8N3P4 1428 aa13□□□□□ -0.33
ZKSCAN3-202ENST00000341464 ANP32EQ9BTT0 268 aa12.99□□□□□ -0.33
ZKSCAN3-202ENST00000341464 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
ZKSCAN3-202ENST00000341464 RANGAP1P46060 587 aaPredicted RBP12.99□□□□□ -0.33
ZKSCAN3-202ENST00000341464 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
ZKSCAN3-202ENST00000341464 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
ZKSCAN3-202ENST00000341464 APLP2Q06481 763 aa12.95□□□□□ -0.34
ZKSCAN3-202ENST00000341464 CUL7Q14999 1698 aa12.95□□□□□ -0.34
ZKSCAN3-202ENST00000341464 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
ZKSCAN3-202ENST00000341464 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
ZKSCAN3-202ENST00000341464 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
ZKSCAN3-202ENST00000341464 EIF4G3O43432 1585 aaKnown RBP12.91□□□□□ -0.34
ZKSCAN3-202ENST00000341464 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
ZKSCAN3-202ENST00000341464 ZNF608Q9ULD9 1512 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-202ENST00000341464 ARHGAP35Q9NRY4 1499 aa12.87□□□□□ -0.35
ZKSCAN3-202ENST00000341464 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.35
ZKSCAN3-202ENST00000341464 GRIN2BQ13224 1484 aa12.83□□□□□ -0.36
ZKSCAN3-202ENST00000341464 MIER1Q8N108 512 aa12.81□□□□□ -0.36
ZKSCAN3-202ENST00000341464 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
ZKSCAN3-202ENST00000341464 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
ZKSCAN3-202ENST00000341464 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
ZKSCAN3-202ENST00000341464 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
ZKSCAN3-202ENST00000341464 SUPT16HQ9Y5B9 1047 aaKnown RBP12.79□□□□□ -0.36
ZKSCAN3-202ENST00000341464 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
ZKSCAN3-202ENST00000341464 TSHZ2Q9NRE2 1034 aa12.78□□□□□ -0.36
ZKSCAN3-202ENST00000341464 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
ZKSCAN3-202ENST00000341464 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
ZKSCAN3-202ENST00000341464 MAP3K1Q13233 1512 aa12.73□□□□□ -0.37
ZKSCAN3-202ENST00000341464 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
ZKSCAN3-202ENST00000341464 FHOD3Q2V2M9 1422 aa12.71□□□□□ -0.37
ZKSCAN3-202ENST00000341464 FMN1Q68DA7 1419 aa12.71□□□□□ -0.37
ZKSCAN3-202ENST00000341464 CHD1O14646 1710 aa12.71□□□□□ -0.38
ZKSCAN3-202ENST00000341464 SYNJ2O15056 1496 aa12.7□□□□□ -0.38
ZKSCAN3-202ENST00000341464 KANK4Q5T7N3 995 aaPredicted RBP12.7□□□□□ -0.38
ZKSCAN3-202ENST00000341464 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
ZKSCAN3-202ENST00000341464 FYCO1Q9BQS8 1478 aa12.69□□□□□ -0.38
ZKSCAN3-202ENST00000341464 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
ZKSCAN3-202ENST00000341464 CASKIN1Q8WXD9 1431 aa12.67□□□□□ -0.38
ZKSCAN3-202ENST00000341464 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
ZKSCAN3-202ENST00000341464 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
ZKSCAN3-202ENST00000341464 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
ZKSCAN3-202ENST00000341464 ATP1B4Q9UN42 357 aaPredicted RBP12.66□□□□□ -0.38
ZKSCAN3-202ENST00000341464 ERICH6Q7L0X2 663 aa12.65□□□□□ -0.38
ZKSCAN3-202ENST00000341464 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
ZKSCAN3-202ENST00000341464 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
ZKSCAN3-202ENST00000341464 FBLN2P98095 1184 aa12.64□□□□□ -0.39
ZKSCAN3-202ENST00000341464 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
ZKSCAN3-202ENST00000341464 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
ZKSCAN3-202ENST00000341464 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
ZKSCAN3-202ENST00000341464 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
ZKSCAN3-202ENST00000341464 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
ZKSCAN3-202ENST00000341464 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
ZKSCAN3-202ENST00000341464 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
ZKSCAN3-202ENST00000341464 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
ZKSCAN3-202ENST00000341464 NUP160Q12769 1436 aa12.58□□□□□ -0.39
ZKSCAN3-202ENST00000341464 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
ZKSCAN3-202ENST00000341464 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
ZKSCAN3-202ENST00000341464 MTUS2Q5JR59 1369 aa12.54□□□□□ -0.4
ZKSCAN3-202ENST00000341464 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
ZKSCAN3-202ENST00000341464 PHLDB1Q86UU1 1377 aa12.52□□□□□ -0.4
ZKSCAN3-202ENST00000341464 KIAA0556O60303 1618 aa12.52□□□□□ -0.41
ZKSCAN3-202ENST00000341464 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
ZKSCAN3-202ENST00000341464 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
ZKSCAN3-202ENST00000341464 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
ZKSCAN3-202ENST00000341464 EHBP1L1Q8N3D4 1523 aa12.49□□□□□ -0.41
ZKSCAN3-202ENST00000341464 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
ZKSCAN3-202ENST00000341464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.48□□□□□ -0.41
ZKSCAN3-202ENST00000341464 FAM50AQ14320 339 aaKnown RBP12.47□□□□□ -0.41
ZKSCAN3-202ENST00000341464 RBM19Q9Y4C8 960 aaKnown RBP12.47□□□□□ -0.41
ZKSCAN3-202ENST00000341464 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
ZKSCAN3-202ENST00000341464 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
ZKSCAN3-202ENST00000341464 ITGAEP38570 1179 aa12.46□□□□□ -0.41
ZKSCAN3-202ENST00000341464 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
ZKSCAN3-202ENST00000341464 SUPT6HQ7KZ85 1726 aaKnown RBP12.46□□□□□ -0.42
ZKSCAN3-202ENST00000341464 FANCIQ9NVI1 1328 aa12.45□□□□□ -0.42
ZKSCAN3-202ENST00000341464 NCOA2Q15596 1464 aa12.44□□□□□ -0.42
ZKSCAN3-202ENST00000341464 FGD6Q6ZV73 1430 aa12.44□□□□□ -0.42
ZKSCAN3-202ENST00000341464 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
ZKSCAN3-202ENST00000341464 MYOM3Q5VTT5 1437 aa12.42□□□□□ -0.42
ZKSCAN3-202ENST00000341464 RAPGEF6Q8TEU7 1601 aa12.42□□□□□ -0.42
ZKSCAN3-202ENST00000341464 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
ZKSCAN3-202ENST00000341464 CDK13Q14004 1512 aaKnown RBP12.41□□□□□ -0.42
ZKSCAN3-202ENST00000341464 NEFLP07196 543 aa12.41□□□□□ -0.42
ZKSCAN3-202ENST00000341464 PRG4Q92954 1404 aaPredicted RBP12.4□□□□□ -0.42
ZKSCAN3-202ENST00000341464 MAGI3Q5TCQ9 1506 aa12.4□□□□□ -0.43
ZKSCAN3-202ENST00000341464 NUP153P49790 1475 aaKnown RBP12.39□□□□□ -0.43
ZKSCAN3-202ENST00000341464 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
ZKSCAN3-202ENST00000341464 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
ZKSCAN3-202ENST00000341464 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
ZKSCAN3-202ENST00000341464 ERCC6L2Q5T890 1561 aa12.38□□□□□ -0.43
ZKSCAN3-202ENST00000341464 ARID3CA6NKF2 412 aa12.37□□□□□ -0.43
ZKSCAN3-202ENST00000341464 RAB3GAP2Q9H2M9 1393 aa12.36□□□□□ -0.43
ZKSCAN3-202ENST00000341464 PLB1Q6P1J6 1458 aa12.36□□□□□ -0.43
ZKSCAN3-202ENST00000341464 FKBP8Q14318 412 aa12.35□□□□□ -0.43
ZKSCAN3-202ENST00000341464 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
ZKSCAN3-202ENST00000341464 PTPN23Q9H3S7 1636 aa12.34□□□□□ -0.43
ZKSCAN3-202ENST00000341464 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
ZKSCAN3-202ENST00000341464 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
ZKSCAN3-202ENST00000341464 PTPRGP23470 1445 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms