RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 RAD54L2Q9Y4B4 1467 aa11.56□□□□□ -0.56
NBR1-201ENST00000341165 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
NBR1-201ENST00000341165 CUL7Q14999 1698 aa11.56□□□□□ -0.56
NBR1-201ENST00000341165 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
NBR1-201ENST00000341165 FMN1Q68DA7 1419 aa11.54□□□□□ -0.56
NBR1-201ENST00000341165 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
NBR1-201ENST00000341165 NESP48681 1621 aa11.53□□□□□ -0.56
NBR1-201ENST00000341165 TIAM1Q13009 1591 aa11.53□□□□□ -0.56
NBR1-201ENST00000341165 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.56
NBR1-201ENST00000341165 LRRC9Q6ZRR7 1453 aa11.52□□□□□ -0.57
NBR1-201ENST00000341165 FYCO1Q9BQS8 1478 aa11.5□□□□□ -0.57
NBR1-201ENST00000341165 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
NBR1-201ENST00000341165 CASKIN1Q8WXD9 1431 aa11.49□□□□□ -0.57
NBR1-201ENST00000341165 AQRO60306 1485 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■■■■□ 23.7
NBR1-201ENST00000341165 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
NBR1-201ENST00000341165 MTUS2Q5JR59 1369 aa11.48□□□□□ -0.57
NBR1-201ENST00000341165 SETD5Q9C0A6 1442 aa11.48□□□□□ -0.57
NBR1-201ENST00000341165 YTHDC1Q96MU7 727 aaKnown RBP11.48□□□□□ -0.57
NBR1-201ENST00000341165 TDRD9Q8NDG6 1382 aaKnown RBP11.48□□□□□ -0.57
NBR1-201ENST00000341165 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
NBR1-201ENST00000341165 RAB3GAP2Q9H2M9 1393 aa11.45□□□□□ -0.58
NBR1-201ENST00000341165 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
NBR1-201ENST00000341165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.43□□□□□ -0.58
NBR1-201ENST00000341165 PCF11O94913 1555 aaKnown RBP11.43□□□□□ -0.58
NBR1-201ENST00000341165 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
NBR1-201ENST00000341165 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
NBR1-201ENST00000341165 CFAP43Q8NDM7 1665 aa11.42□□□□□ -0.58
NBR1-201ENST00000341165 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
NBR1-201ENST00000341165 NEUROD1Q13562 356 aa11.41□□□□□ -0.58
NBR1-201ENST00000341165 MIER1Q8N108 512 aa11.4□□□□□ -0.58
NBR1-201ENST00000341165 BCL11AQ9H165 835 aa11.4□□□□□ -0.58
NBR1-201ENST00000341165 MRC2Q9UBG0 1479 aa11.39□□□□□ -0.59
NBR1-201ENST00000341165 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
NBR1-201ENST00000341165 GTF3C3Q9Y5Q9 886 aa11.37□□□□□ -0.59
NBR1-201ENST00000341165 CCDC18Q5T9S5 1454 aa11.37□□□□□ -0.59
NBR1-201ENST00000341165 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
NBR1-201ENST00000341165 THOC2Q8NI27 1593 aaKnown RBP11.36□□□□□ -0.59
NBR1-201ENST00000341165 FGD6Q6ZV73 1430 aa11.35□□□□□ -0.59
NBR1-201ENST00000341165 CDK11AQ9UQ88 783 aaPredicted RBP11.35□□□□□ -0.59
NBR1-201ENST00000341165 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
NBR1-201ENST00000341165 IFT140Q96RY7 1462 aa11.33□□□□□ -0.59
NBR1-201ENST00000341165 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
NBR1-201ENST00000341165 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
NBR1-201ENST00000341165 MYOM3Q5VTT5 1437 aa11.32□□□□□ -0.6
NBR1-201ENST00000341165 SAMD9Q5K651 1589 aa11.32□□□□□ -0.6
NBR1-201ENST00000341165 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
NBR1-201ENST00000341165 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
NBR1-201ENST00000341165 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
NBR1-201ENST00000341165 NCOA2Q15596 1464 aa11.3□□□□□ -0.6
NBR1-201ENST00000341165 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
NBR1-201ENST00000341165 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
NBR1-201ENST00000341165 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
NBR1-201ENST00000341165 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
NBR1-201ENST00000341165 TARBP1Q13395 1621 aaKnown RBP11.29□□□□□ -0.6
NBR1-201ENST00000341165 TRIM52Q96A61 297 aa11.27□□□□□ -0.61
NBR1-201ENST00000341165 CHMP7Q8WUX9 453 aaPredicted RBP11.27□□□□□ -0.61
NBR1-201ENST00000341165 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
NBR1-201ENST00000341165 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
NBR1-201ENST00000341165 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
NBR1-201ENST00000341165 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
NBR1-201ENST00000341165 PBRM1Q86U86 1689 aa11.25□□□□□ -0.61
NBR1-201ENST00000341165 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
NBR1-201ENST00000341165 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
NBR1-201ENST00000341165 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
NBR1-201ENST00000341165 MIA2Q96PC5 1412 aa11.23□□□□□ -0.61
NBR1-201ENST00000341165 PPP1R15AO75807 674 aaPredicted RBP11.23□□□□□ -0.61
NBR1-201ENST00000341165 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
NBR1-201ENST00000341165 FBLN2P98095 1184 aa11.22□□□□□ -0.61
NBR1-201ENST00000341165 EPRSP07814 1512 aaKnown RBP11.22□□□□□ -0.61
NBR1-201ENST00000341165 ANP32CO43423 234 aa11.21□□□□□ -0.61
NBR1-201ENST00000341165 WDR62O43379 1518 aa11.21□□□□□ -0.61
NBR1-201ENST00000341165 UGGT2Q9NYU1 1516 aa11.21□□□□□ -0.61
NBR1-201ENST00000341165 CARMIL2Q6F5E8 1435 aa11.21□□□□□ -0.61
NBR1-201ENST00000341165 CHIC2Q9UKJ5 165 aa11.21□□□□□ -0.62
NBR1-201ENST00000341165 RRP7BPQ9NSQ0 103 aa11.21□□□□□ -0.62
NBR1-201ENST00000341165 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
NBR1-201ENST00000341165 ARID3CA6NKF2 412 aa11.2□□□□□ -0.62
NBR1-201ENST00000341165 DDX10Q13206 875 aaKnown RBP11.18□□□□□ -0.62
NBR1-201ENST00000341165 MAGI1Q96QZ7 1491 aaPredicted RBP11.18□□□□□ -0.62
NBR1-201ENST00000341165 NAIPQ13075 1403 aa11.18□□□□□ -0.62
NBR1-201ENST00000341165 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
NBR1-201ENST00000341165 TCOF1Q13428 1488 aaKnown RBP11.17□□□□□ -0.62
NBR1-201ENST00000341165 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
NBR1-201ENST00000341165 GRIN2AQ12879 1464 aa11.17□□□□□ -0.62
NBR1-201ENST00000341165 ZNF608Q9ULD9 1512 aaPredicted RBP11.15□□□□□ -0.62
NBR1-201ENST00000341165 ARHGEF11O15085 1522 aa11.14□□□□□ -0.63
NBR1-201ENST00000341165 CFDP1Q9UEE9 299 aaPredicted RBP11.14□□□□□ -0.63
NBR1-201ENST00000341165 SYNJ2O15056 1496 aa11.14□□□□□ -0.63
NBR1-201ENST00000341165 PLEKHD1A6NEE1 506 aa11.13□□□□□ -0.63
NBR1-201ENST00000341165 CDK13Q14004 1512 aaKnown RBP11.13□□□□□ -0.63
NBR1-201ENST00000341165 NEFLP07196 543 aa11.13□□□□□ -0.63
NBR1-201ENST00000341165 KIAA0556O60303 1618 aa11.13□□□□□ -0.63
NBR1-201ENST00000341165 PTPRKQ15262 1439 aa11.13□□□□□ -0.63
NBR1-201ENST00000341165 ROCK1Q13464 1354 aa11.12□□□□□ -0.63
NBR1-201ENST00000341165 CCER2I3L3R5 266 aa11.12□□□□□ -0.63
NBR1-201ENST00000341165 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
NBR1-201ENST00000341165 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
NBR1-201ENST00000341165 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
NBR1-201ENST00000341165 EIF4G2P78344 907 aaKnown RBP eCLIP11.1□□□□□ -0.63
NBR1-201ENST00000341165 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms