RNA–Protein interactions for RNA: ENST00000340951.8

EXD3-201, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXD3, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-201ENST00000340951 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
EXD3-201ENST00000340951 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
EXD3-201ENST00000340951 ERICH6Q7L0X2 663 aa24.22■■□□□ 1.47
EXD3-201ENST00000340951 FGD5Q6ZNL6 1462 aa24.22■■□□□ 1.47
EXD3-201ENST00000340951 RRBP1Q9P2E9 1410 aaKnown RBP24.21■■□□□ 1.47
EXD3-201ENST00000340951 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.46
EXD3-201ENST00000340951 ATP1B4Q9UN42 357 aaPredicted RBP24.2■■□□□ 1.46
EXD3-201ENST00000340951 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
EXD3-201ENST00000340951 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
EXD3-201ENST00000340951 FANCIQ9NVI1 1328 aa24.14■■□□□ 1.45
EXD3-201ENST00000340951 FANCD2Q9BXW9 1451 aa24.14■■□□□ 1.45
EXD3-201ENST00000340951 NESP48681 1621 aa24.13■■□□□ 1.45
EXD3-201ENST00000340951 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
EXD3-201ENST00000340951 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
EXD3-201ENST00000340951 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
EXD3-201ENST00000340951 ANP32CO43423 234 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 MAPKBP1O60336 1514 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 CCER2I3L3R5 266 aa24.09■■□□□ 1.45
EXD3-201ENST00000340951 CDK11AQ9UQ88 783 aaPredicted RBP24.08■■□□□ 1.44
EXD3-201ENST00000340951 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
EXD3-201ENST00000340951 HIRIP3Q9BW71 556 aaPredicted RBP24.06■■□□□ 1.44
EXD3-201ENST00000340951 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
EXD3-201ENST00000340951 IRX6P78412 446 aaPredicted RBP24■■□□□ 1.43
EXD3-201ENST00000340951 PRKCSHP14314 528 aaPredicted RBP23.99■■□□□ 1.43
EXD3-201ENST00000340951 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
EXD3-201ENST00000340951 FAM50AQ14320 339 aaKnown RBP23.95■■□□□ 1.42
EXD3-201ENST00000340951 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
EXD3-201ENST00000340951 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
EXD3-201ENST00000340951 DEKP35659 375 aaKnown RBP23.93■■□□□ 1.42
EXD3-201ENST00000340951 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
EXD3-201ENST00000340951 SETD5Q9C0A6 1442 aa23.91■■□□□ 1.42
EXD3-201ENST00000340951 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
EXD3-201ENST00000340951 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
EXD3-201ENST00000340951 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.41
EXD3-201ENST00000340951 PHLDB1Q86UU1 1377 aa23.85■■□□□ 1.41
EXD3-201ENST00000340951 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
EXD3-201ENST00000340951 TIMELESSQ9UNS1 1208 aa23.82■■□□□ 1.4
EXD3-201ENST00000340951 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
EXD3-201ENST00000340951 TIAM1Q13009 1591 aa23.81■■□□□ 1.4
EXD3-201ENST00000340951 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
EXD3-201ENST00000340951 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
EXD3-201ENST00000340951 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
EXD3-201ENST00000340951 PPP4R2Q9NY27 417 aa23.75■■□□□ 1.39
EXD3-201ENST00000340951 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
EXD3-201ENST00000340951 NBR1Q14596 966 aa23.72■■□□□ 1.39
EXD3-201ENST00000340951 ERICH6BQ5W0A0 696 aa23.71■■□□□ 1.39
EXD3-201ENST00000340951 NOP58Q9Y2X3 529 aaKnown RBP23.68■■□□□ 1.38
EXD3-201ENST00000340951 B4GALNT3Q6L9W6 998 aa23.66■■□□□ 1.38
EXD3-201ENST00000340951 TONSLQ96HA7 1378 aa23.66■■□□□ 1.38
EXD3-201ENST00000340951 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
EXD3-201ENST00000340951 MAP3K1Q13233 1512 aa23.63■■□□□ 1.37
EXD3-201ENST00000340951 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
EXD3-201ENST00000340951 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
EXD3-201ENST00000340951 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
EXD3-201ENST00000340951 PAK3O75914 559 aaPredicted RBP23.6■■□□□ 1.37
EXD3-201ENST00000340951 ANO8Q9HCE9 1232 aaPredicted RBP23.6■■□□□ 1.37
EXD3-201ENST00000340951 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
EXD3-201ENST00000340951 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.37
EXD3-201ENST00000340951 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
EXD3-201ENST00000340951 CUL7Q14999 1698 aa23.54■■□□□ 1.36
EXD3-201ENST00000340951 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
EXD3-201ENST00000340951 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
EXD3-201ENST00000340951 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.356e-7■■□□□ 11.9
EXD3-201ENST00000340951 CFAP43Q8NDM7 1665 aa23.5■■□□□ 1.35
EXD3-201ENST00000340951 RTL5Q5HYW3 569 aaPredicted RBP23.48■■□□□ 1.35
EXD3-201ENST00000340951 CCDC184Q52MB2 194 aa23.47■■□□□ 1.35
EXD3-201ENST00000340951 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
EXD3-201ENST00000340951 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
EXD3-201ENST00000340951 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
EXD3-201ENST00000340951 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
EXD3-201ENST00000340951 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
EXD3-201ENST00000340951 FGD6Q6ZV73 1430 aa23.44■■□□□ 1.34
EXD3-201ENST00000340951 WASHC2AQ641Q2 1341 aa23.44■■□□□ 1.34
EXD3-201ENST00000340951 SALL2Q9Y467 1007 aaPredicted RBP23.43■■□□□ 1.34
EXD3-201ENST00000340951 ANP32AP39687 249 aaKnown RBP23.43■■□□□ 1.34
EXD3-201ENST00000340951 CHIC2Q9UKJ5 165 aa23.43■■□□□ 1.34
EXD3-201ENST00000340951 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
EXD3-201ENST00000340951 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
EXD3-201ENST00000340951 IPO9Q96P70 1041 aaKnown RBP23.39■■□□□ 1.34
EXD3-201ENST00000340951 ZBED9Q6R2W3 1325 aa23.38■■□□□ 1.33
EXD3-201ENST00000340951 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
EXD3-201ENST00000340951 RRP7BPQ9NSQ0 103 aa23.37■■□□□ 1.33
EXD3-201ENST00000340951 ZBTB47Q9UFB7 747 aaPredicted RBP23.37■■□□□ 1.33
EXD3-201ENST00000340951 CCDC18Q5T9S5 1454 aa23.37■■□□□ 1.33
EXD3-201ENST00000340951 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
EXD3-201ENST00000340951 IL27Q8NEV9 243 aa23.34■■□□□ 1.33
EXD3-201ENST00000340951 UACAQ9BZF9 1416 aa23.33■■□□□ 1.33
EXD3-201ENST00000340951 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
EXD3-201ENST00000340951 CNTLNQ9NXG0 1405 aa23.32■■□□□ 1.32
EXD3-201ENST00000340951 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
EXD3-201ENST00000340951 SAMD9Q5K651 1589 aa23.32■■□□□ 1.32
EXD3-201ENST00000340951 PRKRIP1Q9H875 184 aaPredicted RBP23.31■■□□□ 1.32
EXD3-201ENST00000340951 RTN4Q9NQC3 1192 aaKnown RBP23.31■■□□□ 1.32
EXD3-201ENST00000340951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.3■■□□□ 1.323e-11■■■■■ 37.1
EXD3-201ENST00000340951 CCDC136Q96JN2 1154 aa23.3■■□□□ 1.32
EXD3-201ENST00000340951 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
EXD3-201ENST00000340951 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
EXD3-201ENST00000340951 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.322e-6■■■■■ 36
EXD3-201ENST00000340951 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms