RNA–Protein interactions for RNA: ENST00000340258.9

RASSF4-201, Transcript of Ras association domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RASSF4, Length 3,641 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-201ENST00000340258 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
RASSF4-201ENST00000340258 RAB3GAP2Q9H2M9 1393 aa14□□□□□ -0.17
RASSF4-201ENST00000340258 NESP48681 1621 aa13.99□□□□□ -0.17
RASSF4-201ENST00000340258 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
RASSF4-201ENST00000340258 CUX1P39880 1505 aa13.96□□□□□ -0.17
RASSF4-201ENST00000340258 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
RASSF4-201ENST00000340258 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
RASSF4-201ENST00000340258 CNGB1Q14028 1251 aaPredicted RBP13.94□□□□□ -0.18
RASSF4-201ENST00000340258 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
RASSF4-201ENST00000340258 BIVM-ERCC5R4GMW8 1640 aa13.91□□□□□ -0.18
RASSF4-201ENST00000340258 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
RASSF4-201ENST00000340258 PRDM2Q13029 1718 aa13.9□□□□□ -0.19
RASSF4-201ENST00000340258 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
RASSF4-201ENST00000340258 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
RASSF4-201ENST00000340258 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
RASSF4-201ENST00000340258 TONSLQ96HA7 1378 aa13.84□□□□□ -0.19
RASSF4-201ENST00000340258 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
RASSF4-201ENST00000340258 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
RASSF4-201ENST00000340258 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
RASSF4-201ENST00000340258 MSH5O43196 834 aa13.83□□□□□ -0.19
RASSF4-201ENST00000340258 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
RASSF4-201ENST00000340258 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
RASSF4-201ENST00000340258 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
RASSF4-201ENST00000340258 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
RASSF4-201ENST00000340258 CUX2O14529 1486 aa13.8□□□□□ -0.2
RASSF4-201ENST00000340258 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
RASSF4-201ENST00000340258 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
RASSF4-201ENST00000340258 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
RASSF4-201ENST00000340258 PHLDB1Q86UU1 1377 aa13.78□□□□□ -0.2
RASSF4-201ENST00000340258 TOPBP1Q92547 1522 aa13.77□□□□□ -0.2
RASSF4-201ENST00000340258 MAPKBP1O60336 1514 aa13.77□□□□□ -0.2
RASSF4-201ENST00000340258 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
RASSF4-201ENST00000340258 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
RASSF4-201ENST00000340258 NBR1Q14596 966 aa13.76□□□□□ -0.21
RASSF4-201ENST00000340258 B4GALNT3Q6L9W6 998 aa13.76□□□□□ -0.21
RASSF4-201ENST00000340258 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
RASSF4-201ENST00000340258 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
RASSF4-201ENST00000340258 CHIC2Q9UKJ5 165 aa13.73□□□□□ -0.21
RASSF4-201ENST00000340258 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
RASSF4-201ENST00000340258 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
RASSF4-201ENST00000340258 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
RASSF4-201ENST00000340258 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.21
RASSF4-201ENST00000340258 IGF1RP08069 1367 aa13.7□□□□□ -0.22
RASSF4-201ENST00000340258 RRP7BPQ9NSQ0 103 aa13.69□□□□□ -0.22
RASSF4-201ENST00000340258 TIMELESSQ9UNS1 1208 aa13.69□□□□□ -0.22
RASSF4-201ENST00000340258 CARMIL1Q5VZK9 1371 aa13.69□□□□□ -0.22
RASSF4-201ENST00000340258 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
RASSF4-201ENST00000340258 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
RASSF4-201ENST00000340258 CCDC184Q52MB2 194 aa13.66□□□□□ -0.22
RASSF4-201ENST00000340258 LRRC9Q6ZRR7 1453 aa13.66□□□□□ -0.22
RASSF4-201ENST00000340258 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
RASSF4-201ENST00000340258 PPP4R2Q9NY27 417 aa13.65□□□□□ -0.22
RASSF4-201ENST00000340258 DEKP35659 375 aaKnown RBP13.64□□□□□ -0.23
RASSF4-201ENST00000340258 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
RASSF4-201ENST00000340258 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
RASSF4-201ENST00000340258 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
RASSF4-201ENST00000340258 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
RASSF4-201ENST00000340258 FOXD1Q16676 465 aa13.63□□□□□ -0.23
RASSF4-201ENST00000340258 MTUS2Q5JR59 1369 aa13.62□□□□□ -0.23
RASSF4-201ENST00000340258 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
RASSF4-201ENST00000340258 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
RASSF4-201ENST00000340258 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
RASSF4-201ENST00000340258 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
RASSF4-201ENST00000340258 WASHC2AQ641Q2 1341 aa13.59□□□□□ -0.23
RASSF4-201ENST00000340258 FHAD1B1AJZ9 1412 aa13.59□□□□□ -0.23
RASSF4-201ENST00000340258 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
RASSF4-201ENST00000340258 CCDC136Q96JN2 1154 aa13.56□□□□□ -0.24
RASSF4-201ENST00000340258 NOP58Q9Y2X3 529 aaKnown RBP13.56□□□□□ -0.24
RASSF4-201ENST00000340258 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
RASSF4-201ENST00000340258 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
RASSF4-201ENST00000340258 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
RASSF4-201ENST00000340258 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
RASSF4-201ENST00000340258 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.248e-7■■■■□ 19.8
RASSF4-201ENST00000340258 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.24
RASSF4-201ENST00000340258 SALL2Q9Y467 1007 aaPredicted RBP13.52□□□□□ -0.24
RASSF4-201ENST00000340258 L3MBTL2Q969R5 705 aa13.52□□□□□ -0.25
RASSF4-201ENST00000340258 PRKRIP1Q9H875 184 aaPredicted RBP13.52□□□□□ -0.25
RASSF4-201ENST00000340258 C11orf95C9JLR9 678 aaPredicted RBP13.51□□□□□ -0.25
RASSF4-201ENST00000340258 TARBP1Q13395 1621 aaKnown RBP13.49□□□□□ -0.25
RASSF4-201ENST00000340258 FGD6Q6ZV73 1430 aa13.49□□□□□ -0.25
RASSF4-201ENST00000340258 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
RASSF4-201ENST00000340258 WDR62O43379 1518 aa13.48□□□□□ -0.25
RASSF4-201ENST00000340258 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
RASSF4-201ENST00000340258 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
RASSF4-201ENST00000340258 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
RASSF4-201ENST00000340258 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
RASSF4-201ENST00000340258 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
RASSF4-201ENST00000340258 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
RASSF4-201ENST00000340258 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.25
RASSF4-201ENST00000340258 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.26
RASSF4-201ENST00000340258 CUL7Q14999 1698 aa13.45□□□□□ -0.26
RASSF4-201ENST00000340258 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
RASSF4-201ENST00000340258 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
RASSF4-201ENST00000340258 ZBED9Q6R2W3 1325 aa13.43□□□□□ -0.26
RASSF4-201ENST00000340258 FMN1Q68DA7 1419 aa13.43□□□□□ -0.26
RASSF4-201ENST00000340258 MAP3K1Q13233 1512 aa13.42□□□□□ -0.26
RASSF4-201ENST00000340258 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
RASSF4-201ENST00000340258 AKNAQ7Z591 1439 aa13.42□□□□□ -0.26
RASSF4-201ENST00000340258 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
RASSF4-201ENST00000340258 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms