RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 APLP2Q06481 763 aa19.72■□□□□ 0.75
CDK5RAP1-201ENST00000339269 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP1-201ENST00000339269 PBRM1Q86U86 1689 aa19.68■□□□□ 0.74
CDK5RAP1-201ENST00000339269 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
CDK5RAP1-201ENST00000339269 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
CDK5RAP1-201ENST00000339269 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP1-201ENST00000339269 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
CDK5RAP1-201ENST00000339269 CUL7Q14999 1698 aa19.61■□□□□ 0.73
CDK5RAP1-201ENST00000339269 CHD1O14646 1710 aa19.6■□□□□ 0.73
CDK5RAP1-201ENST00000339269 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
CDK5RAP1-201ENST00000339269 SNAPC4Q5SXM2 1469 aa19.59■□□□□ 0.73
CDK5RAP1-201ENST00000339269 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
CDK5RAP1-201ENST00000339269 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
CDK5RAP1-201ENST00000339269 FBLN2P98095 1184 aa19.54■□□□□ 0.72
CDK5RAP1-201ENST00000339269 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP1-201ENST00000339269 CTTNBP2Q8WZ74 1663 aa19.5■□□□□ 0.71
CDK5RAP1-201ENST00000339269 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
CDK5RAP1-201ENST00000339269 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
CDK5RAP1-201ENST00000339269 FHOD3Q2V2M9 1422 aa19.49■□□□□ 0.71
CDK5RAP1-201ENST00000339269 LRRC9Q6ZRR7 1453 aa19.49■□□□□ 0.71
CDK5RAP1-201ENST00000339269 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
CDK5RAP1-201ENST00000339269 CFAP43Q8NDM7 1665 aa19.48■□□□□ 0.71
CDK5RAP1-201ENST00000339269 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
CDK5RAP1-201ENST00000339269 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
CDK5RAP1-201ENST00000339269 ADAMTS12P58397 1594 aa19.48■□□□□ 0.71
CDK5RAP1-201ENST00000339269 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
CDK5RAP1-201ENST00000339269 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
CDK5RAP1-201ENST00000339269 DHX57Q6P158 1386 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP1-201ENST00000339269 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
CDK5RAP1-201ENST00000339269 FYCO1Q9BQS8 1478 aa19.43■□□□□ 0.7
CDK5RAP1-201ENST00000339269 CASKIN1Q8WXD9 1431 aa19.42■□□□□ 0.7
CDK5RAP1-201ENST00000339269 SAMD9Q5K651 1589 aa19.42■□□□□ 0.7
CDK5RAP1-201ENST00000339269 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
CDK5RAP1-201ENST00000339269 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
CDK5RAP1-201ENST00000339269 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
CDK5RAP1-201ENST00000339269 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
CDK5RAP1-201ENST00000339269 ZNF316A6NFI3 1004 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP1-201ENST00000339269 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP1-201ENST00000339269 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
CDK5RAP1-201ENST00000339269 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
CDK5RAP1-201ENST00000339269 LRRIQ1Q96JM4 1722 aa19.29■□□□□ 0.68
CDK5RAP1-201ENST00000339269 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
CDK5RAP1-201ENST00000339269 NUP160Q12769 1436 aa19.25■□□□□ 0.67
CDK5RAP1-201ENST00000339269 ITGAEP38570 1179 aa19.23■□□□□ 0.67
CDK5RAP1-201ENST00000339269 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
CDK5RAP1-201ENST00000339269 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
CDK5RAP1-201ENST00000339269 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
CDK5RAP1-201ENST00000339269 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP1-201ENST00000339269 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
CDK5RAP1-201ENST00000339269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDK5RAP1-201ENST00000339269 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
CDK5RAP1-201ENST00000339269 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
CDK5RAP1-201ENST00000339269 IQGAP2Q13576 1575 aa19.18■□□□□ 0.66
CDK5RAP1-201ENST00000339269 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
CDK5RAP1-201ENST00000339269 MAGI3Q5TCQ9 1506 aa19.16■□□□□ 0.66
CDK5RAP1-201ENST00000339269 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP1-201ENST00000339269 SHROOM2Q13796 1616 aa19.14■□□□□ 0.65
CDK5RAP1-201ENST00000339269 UGGT2Q9NYU1 1516 aa19.13■□□□□ 0.65
CDK5RAP1-201ENST00000339269 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
CDK5RAP1-201ENST00000339269 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
CDK5RAP1-201ENST00000339269 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
CDK5RAP1-201ENST00000339269 EHBP1L1Q8N3D4 1523 aa19.11■□□□□ 0.65
CDK5RAP1-201ENST00000339269 PTPRKQ15262 1439 aa19.1■□□□□ 0.65
CDK5RAP1-201ENST00000339269 ERCC6L2Q5T890 1561 aa19.08■□□□□ 0.64
CDK5RAP1-201ENST00000339269 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
CDK5RAP1-201ENST00000339269 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
CDK5RAP1-201ENST00000339269 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
CDK5RAP1-201ENST00000339269 HECW1Q76N89 1606 aa19.06■□□□□ 0.64
CDK5RAP1-201ENST00000339269 DISP1Q96F81 1524 aa19.06■□□□□ 0.64
CDK5RAP1-201ENST00000339269 SCAF1Q9H7N4 1312 aaKnown RBP19.05■□□□□ 0.64
CDK5RAP1-201ENST00000339269 SUPT6HQ7KZ85 1726 aaKnown RBP19.05■□□□□ 0.64
CDK5RAP1-201ENST00000339269 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
CDK5RAP1-201ENST00000339269 PRG4Q92954 1404 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP1-201ENST00000339269 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
CDK5RAP1-201ENST00000339269 CDK13Q14004 1512 aaKnown RBP19.02■□□□□ 0.63
CDK5RAP1-201ENST00000339269 KIAA0556O60303 1618 aa19.02■□□□□ 0.63
CDK5RAP1-201ENST00000339269 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
CDK5RAP1-201ENST00000339269 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
CDK5RAP1-201ENST00000339269 MIER1Q8N108 512 aa18.99■□□□□ 0.63
CDK5RAP1-201ENST00000339269 TCOF1Q13428 1488 aaKnown RBP18.99■□□□□ 0.63
CDK5RAP1-201ENST00000339269 PTPN23Q9H3S7 1636 aa18.98■□□□□ 0.63
CDK5RAP1-201ENST00000339269 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP1-201ENST00000339269 NAIPQ13075 1403 aa18.95■□□□□ 0.62
CDK5RAP1-201ENST00000339269 NUP153P49790 1475 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP1-201ENST00000339269 PELP1Q8IZL8 1130 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP1-201ENST00000339269 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
CDK5RAP1-201ENST00000339269 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
CDK5RAP1-201ENST00000339269 RAPGEF6Q8TEU7 1601 aa18.88■□□□□ 0.61
CDK5RAP1-201ENST00000339269 UACAQ9BZF9 1416 aa18.88■□□□□ 0.61
CDK5RAP1-201ENST00000339269 MIA2Q96PC5 1412 aa18.87■□□□□ 0.61
CDK5RAP1-201ENST00000339269 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
CDK5RAP1-201ENST00000339269 AKNAQ7Z591 1439 aa18.84■□□□□ 0.61
CDK5RAP1-201ENST00000339269 GCC2Q8IWJ2 1684 aa18.83■□□□□ 0.6
CDK5RAP1-201ENST00000339269 DENND4BO75064 1496 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP1-201ENST00000339269 PTPRGP23470 1445 aa18.82■□□□□ 0.6
CDK5RAP1-201ENST00000339269 KDM6BO15054 1643 aa18.82■□□□□ 0.6
CDK5RAP1-201ENST00000339269 CENPBP07199 599 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP1-201ENST00000339269 TIMELESSQ9UNS1 1208 aa18.81■□□□□ 0.6
CDK5RAP1-201ENST00000339269 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
CDK5RAP1-201ENST00000339269 MYT1Q01538 1121 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms