RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
TREM1-202ENST00000334475 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
TREM1-202ENST00000334475 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
TREM1-202ENST00000334475 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
TREM1-202ENST00000334475 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
TREM1-202ENST00000334475 FBLN2P98095 1184 aa14.14□□□□□ -0.15
TREM1-202ENST00000334475 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
TREM1-202ENST00000334475 HRCP23327 699 aa14.11□□□□□ -0.15
TREM1-202ENST00000334475 CUX1P39880 1505 aa14.1□□□□□ -0.15
TREM1-202ENST00000334475 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
TREM1-202ENST00000334475 KCNA4P22459 653 aa14.09□□□□□ -0.15
TREM1-202ENST00000334475 SNAPC4Q5SXM2 1469 aa14.09□□□□□ -0.15
TREM1-202ENST00000334475 ERICH3Q5RHP9 1530 aa14.08□□□□□ -0.16
TREM1-202ENST00000334475 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
TREM1-202ENST00000334475 KIF27Q86VH2 1401 aa14□□□□□ -0.17
TREM1-202ENST00000334475 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
TREM1-202ENST00000334475 ERCC6L2Q5T890 1561 aa14□□□□□ -0.17
TREM1-202ENST00000334475 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
TREM1-202ENST00000334475 PRXQ9BXM0 1461 aa13.99□□□□□ -0.17
TREM1-202ENST00000334475 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
TREM1-202ENST00000334475 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
TREM1-202ENST00000334475 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.17
TREM1-202ENST00000334475 RAPGEF2Q9Y4G8 1499 aa13.96□□□□□ -0.17
TREM1-202ENST00000334475 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
TREM1-202ENST00000334475 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
TREM1-202ENST00000334475 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
TREM1-202ENST00000334475 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
TREM1-202ENST00000334475 CLIP1P30622 1438 aa13.92□□□□□ -0.18
TREM1-202ENST00000334475 ABCA5Q8WWZ7 1642 aa13.89□□□□□ -0.19
TREM1-202ENST00000334475 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
TREM1-202ENST00000334475 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
TREM1-202ENST00000334475 RNF39Q9H2S5 420 aa13.86□□□□□ -0.19
TREM1-202ENST00000334475 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
TREM1-202ENST00000334475 CEP170Q5SW79 1584 aa13.84□□□□□ -0.19
TREM1-202ENST00000334475 CUL7Q14999 1698 aa13.81□□□□□ -0.2
TREM1-202ENST00000334475 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
TREM1-202ENST00000334475 NUP160Q12769 1436 aa13.8□□□□□ -0.2
TREM1-202ENST00000334475 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
TREM1-202ENST00000334475 SHROOM2Q13796 1616 aa13.78□□□□□ -0.2
TREM1-202ENST00000334475 IGF1RP08069 1367 aa13.77□□□□□ -0.21
TREM1-202ENST00000334475 KIF13AQ9H1H9 1805 aa13.77□□□□□ -0.21
TREM1-202ENST00000334475 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
TREM1-202ENST00000334475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
TREM1-202ENST00000334475 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
TREM1-202ENST00000334475 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
TREM1-202ENST00000334475 CTTNBP2Q8WZ74 1663 aa13.71□□□□□ -0.21
TREM1-202ENST00000334475 ARHGAP35Q9NRY4 1499 aa13.7□□□□□ -0.22
TREM1-202ENST00000334475 APLP2Q06481 763 aa13.7□□□□□ -0.22
TREM1-202ENST00000334475 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
TREM1-202ENST00000334475 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
TREM1-202ENST00000334475 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
TREM1-202ENST00000334475 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
TREM1-202ENST00000334475 MAP3K1Q13233 1512 aa13.67□□□□□ -0.22
TREM1-202ENST00000334475 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
TREM1-202ENST00000334475 JPH4Q96JJ6 628 aa13.63□□□□□ -0.23
TREM1-202ENST00000334475 ABCC10Q5T3U5 1492 aa13.61□□□□□ -0.23
TREM1-202ENST00000334475 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
TREM1-202ENST00000334475 FAM69CQ0P6D2 419 aa13.6□□□□□ -0.23
TREM1-202ENST00000334475 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
TREM1-202ENST00000334475 DIP2BQ9P265 1576 aa13.58□□□□□ -0.23
TREM1-202ENST00000334475 TIAM1Q13009 1591 aa13.58□□□□□ -0.24
TREM1-202ENST00000334475 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
TREM1-202ENST00000334475 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
TREM1-202ENST00000334475 RRBP1Q9P2E9 1410 aaKnown RBP13.54□□□□□ -0.24
TREM1-202ENST00000334475 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
TREM1-202ENST00000334475 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
TREM1-202ENST00000334475 TTBK1Q5TCY1 1321 aaPredicted RBP13.53□□□□□ -0.24
TREM1-202ENST00000334475 PCF11O94913 1555 aaKnown RBP13.53□□□□□ -0.24
TREM1-202ENST00000334475 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
TREM1-202ENST00000334475 TSPOAP1O95153 1857 aa13.51□□□□□ -0.25
TREM1-202ENST00000334475 FMN1Q68DA7 1419 aa13.48□□□□□ -0.25
TREM1-202ENST00000334475 CASKIN1Q8WXD9 1431 aa13.48□□□□□ -0.25
TREM1-202ENST00000334475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
TREM1-202ENST00000334475 KDM6BO15054 1643 aa13.48□□□□□ -0.25
TREM1-202ENST00000334475 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
TREM1-202ENST00000334475 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
TREM1-202ENST00000334475 LRRC9Q6ZRR7 1453 aa13.47□□□□□ -0.25
TREM1-202ENST00000334475 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
TREM1-202ENST00000334475 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
TREM1-202ENST00000334475 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
TREM1-202ENST00000334475 COL17A1Q9UMD9 1497 aaPredicted RBP13.44□□□□□ -0.26
TREM1-202ENST00000334475 KANK4Q5T7N3 995 aaPredicted RBP13.44□□□□□ -0.26
TREM1-202ENST00000334475 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
TREM1-202ENST00000334475 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
TREM1-202ENST00000334475 NPM1P06748 294 aaKnown RBP eCLIP13.42□□□□□ -0.26
TREM1-202ENST00000334475 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
TREM1-202ENST00000334475 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
TREM1-202ENST00000334475 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
TREM1-202ENST00000334475 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
TREM1-202ENST00000334475 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
TREM1-202ENST00000334475 PTPRGP23470 1445 aa13.38□□□□□ -0.27
TREM1-202ENST00000334475 ABCC2Q92887 1545 aa13.37□□□□□ -0.27
TREM1-202ENST00000334475 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
TREM1-202ENST00000334475 HECW1Q76N89 1606 aa13.36□□□□□ -0.27
TREM1-202ENST00000334475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.36□□□□□ -0.27
TREM1-202ENST00000334475 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
TREM1-202ENST00000334475 ADGRL1O94910 1474 aa13.36□□□□□ -0.27
TREM1-202ENST00000334475 CCDC18Q5T9S5 1454 aa13.36□□□□□ -0.27
TREM1-202ENST00000334475 EHBP1L1Q8N3D4 1523 aa13.34□□□□□ -0.27
TREM1-202ENST00000334475 GLI2P10070 1586 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms