RNA–Protein interactions for RNA: ENST00000334295.8

TPGS2-201, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPGS2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-201ENST00000334295 PHLDB1Q86UU1 1377 aa21.6■■□□□ 1.05
TPGS2-201ENST00000334295 CFTRP13569 1480 aa21.59■■□□□ 1.05
TPGS2-201ENST00000334295 FHOD3Q2V2M9 1422 aa21.56■■□□□ 1.04
TPGS2-201ENST00000334295 FKBP8Q14318 412 aa21.56■■□□□ 1.04
TPGS2-201ENST00000334295 SETD5Q9C0A6 1442 aa21.54■■□□□ 1.04
TPGS2-201ENST00000334295 FGD5Q6ZNL6 1462 aa21.53■■□□□ 1.04
TPGS2-201ENST00000334295 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
TPGS2-201ENST00000334295 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
TPGS2-201ENST00000334295 CNGB1Q14028 1251 aaPredicted RBP21.5■■□□□ 1.03
TPGS2-201ENST00000334295 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
TPGS2-201ENST00000334295 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
TPGS2-201ENST00000334295 LRRC9Q6ZRR7 1453 aa21.44■■□□□ 1.02
TPGS2-201ENST00000334295 ANP32CO43423 234 aa21.44■■□□□ 1.02
TPGS2-201ENST00000334295 NEFLP07196 543 aa21.43■■□□□ 1.02
TPGS2-201ENST00000334295 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
TPGS2-201ENST00000334295 RRP7BPQ9NSQ0 103 aa21.41■■□□□ 1.02
TPGS2-201ENST00000334295 TIAM1Q13009 1591 aa21.41■■□□□ 1.02
TPGS2-201ENST00000334295 MAPKBP1O60336 1514 aa21.41■■□□□ 1.02
TPGS2-201ENST00000334295 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
TPGS2-201ENST00000334295 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
TPGS2-201ENST00000334295 TSHZ2Q9NRE2 1034 aa21.39■■□□□ 1.02
TPGS2-201ENST00000334295 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
TPGS2-201ENST00000334295 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
TPGS2-201ENST00000334295 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
TPGS2-201ENST00000334295 NESP48681 1621 aa21.34■■□□□ 1.01
TPGS2-201ENST00000334295 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
TPGS2-201ENST00000334295 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
TPGS2-201ENST00000334295 MYT1Q01538 1121 aa21.32■■□□□ 1
TPGS2-201ENST00000334295 PCF11O94913 1555 aaKnown RBP21.31■■□□□ 1
TPGS2-201ENST00000334295 FOXD1Q16676 465 aa21.28■■□□□ 1
TPGS2-201ENST00000334295 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
TPGS2-201ENST00000334295 POLR3GLQ9BT43 218 aa21.26■□□□□ 0.99
TPGS2-201ENST00000334295 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
TPGS2-201ENST00000334295 SENP3-EIF4A1A0A087X0R7 540 aa21.23■□□□□ 0.99
TPGS2-201ENST00000334295 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
TPGS2-201ENST00000334295 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
TPGS2-201ENST00000334295 FGD6Q6ZV73 1430 aa21.16■□□□□ 0.98
TPGS2-201ENST00000334295 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
TPGS2-201ENST00000334295 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.98
TPGS2-201ENST00000334295 PTPRKQ15262 1439 aa21.14■□□□□ 0.97
TPGS2-201ENST00000334295 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
TPGS2-201ENST00000334295 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
TPGS2-201ENST00000334295 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
TPGS2-201ENST00000334295 HSPA5P11021 654 aaKnown RBP21.1■□□□□ 0.97
TPGS2-201ENST00000334295 FMN1Q68DA7 1419 aa21.1■□□□□ 0.97
TPGS2-201ENST00000334295 FYCO1Q9BQS8 1478 aa21.08■□□□□ 0.97
TPGS2-201ENST00000334295 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
TPGS2-201ENST00000334295 MAP3K1Q13233 1512 aa21.07■□□□□ 0.96
TPGS2-201ENST00000334295 CCER2I3L3R5 266 aa21.05■□□□□ 0.96
TPGS2-201ENST00000334295 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.961e-6■■□□□ 12.5
TPGS2-201ENST00000334295 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
TPGS2-201ENST00000334295 NCOA2Q15596 1464 aa21.03■□□□□ 0.96
TPGS2-201ENST00000334295 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
TPGS2-201ENST00000334295 CCDC184Q52MB2 194 aa21.02■□□□□ 0.96
TPGS2-201ENST00000334295 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
TPGS2-201ENST00000334295 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
TPGS2-201ENST00000334295 EIF4G2P78344 907 aaKnown RBP eCLIP21■□□□□ 0.954e-8■■■□□ 15.6
TPGS2-201ENST00000334295 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
TPGS2-201ENST00000334295 CFAP43Q8NDM7 1665 aa21■□□□□ 0.95
TPGS2-201ENST00000334295 L3MBTL2Q969R5 705 aa21■□□□□ 0.95
TPGS2-201ENST00000334295 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
TPGS2-201ENST00000334295 WASHC2AQ641Q2 1341 aa20.98■□□□□ 0.95
TPGS2-201ENST00000334295 FBLN2P98095 1184 aa20.98■□□□□ 0.95
TPGS2-201ENST00000334295 NAIPQ13075 1403 aa20.98■□□□□ 0.95
TPGS2-201ENST00000334295 MYOM3Q5VTT5 1437 aa20.98■□□□□ 0.95
TPGS2-201ENST00000334295 MPHOSPH9Q99550 1183 aa20.97■□□□□ 0.95
TPGS2-201ENST00000334295 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
TPGS2-201ENST00000334295 MRS2Q9HD23 443 aa20.97■□□□□ 0.95
TPGS2-201ENST00000334295 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
TPGS2-201ENST00000334295 ZNF644Q9H582 1327 aaPredicted RBP20.96■□□□□ 0.95
TPGS2-201ENST00000334295 HFM1A2PYH4 1435 aa20.95■□□□□ 0.94
TPGS2-201ENST00000334295 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
TPGS2-201ENST00000334295 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
TPGS2-201ENST00000334295 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
TPGS2-201ENST00000334295 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
TPGS2-201ENST00000334295 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
TPGS2-201ENST00000334295 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.93
TPGS2-201ENST00000334295 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
TPGS2-201ENST00000334295 CDK11AQ9UQ88 783 aaPredicted RBP20.88■□□□□ 0.93
TPGS2-201ENST00000334295 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
TPGS2-201ENST00000334295 CDK13Q14004 1512 aaKnown RBP20.86■□□□□ 0.93
TPGS2-201ENST00000334295 NBPF8Q3BBV2 869 aa20.84■□□□□ 0.93
TPGS2-201ENST00000334295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.84■□□□□ 0.93
TPGS2-201ENST00000334295 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
TPGS2-201ENST00000334295 CUL7Q14999 1698 aa20.82■□□□□ 0.92
TPGS2-201ENST00000334295 KDM2AQ9Y2K7 1162 aa20.8■□□□□ 0.92
TPGS2-201ENST00000334295 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
TPGS2-201ENST00000334295 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
TPGS2-201ENST00000334295 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
TPGS2-201ENST00000334295 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
TPGS2-201ENST00000334295 PRKRIP1Q9H875 184 aaPredicted RBP20.77■□□□□ 0.92
TPGS2-201ENST00000334295 SUPT6HQ7KZ85 1726 aaKnown RBP20.77■□□□□ 0.92
TPGS2-201ENST00000334295 CFDP1Q9UEE9 299 aaPredicted RBP20.75■□□□□ 0.91
TPGS2-201ENST00000334295 KDM6BO15054 1643 aa20.74■□□□□ 0.91
TPGS2-201ENST00000334295 EHBP1L1Q8N3D4 1523 aa20.74■□□□□ 0.91
TPGS2-201ENST00000334295 LRRIQ1Q96JM4 1722 aa20.72■□□□□ 0.91
TPGS2-201ENST00000334295 KIF7Q2M1P5 1343 aa20.7■□□□□ 0.9
TPGS2-201ENST00000334295 MSH5O43196 834 aa20.7■□□□□ 0.9
TPGS2-201ENST00000334295 EPRSP07814 1512 aaKnown RBP20.7■□□□□ 0.9
TPGS2-201ENST00000334295 CCDC7Q96M83 1385 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms