RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 CCNB3Q8WWL7 1395 aa18.74■□□□□ 0.59
C12orf56-201ENST00000333722 DDX10Q13206 875 aaKnown RBP18.72■□□□□ 0.59
C12orf56-201ENST00000333722 KIF21BO75037 1637 aa18.71■□□□□ 0.59
C12orf56-201ENST00000333722 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
C12orf56-201ENST00000333722 MYT1LQ9UL68 1186 aa18.7■□□□□ 0.58
C12orf56-201ENST00000333722 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
C12orf56-201ENST00000333722 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
C12orf56-201ENST00000333722 TOP2BQ02880 1626 aa18.65■□□□□ 0.58
C12orf56-201ENST00000333722 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
C12orf56-201ENST00000333722 PRXQ9BXM0 1461 aa18.63■□□□□ 0.57
C12orf56-201ENST00000333722 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
C12orf56-201ENST00000333722 ERCC6Q03468 1493 aa18.58■□□□□ 0.56
C12orf56-201ENST00000333722 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
C12orf56-201ENST00000333722 BCANQ96GW7 911 aa18.56■□□□□ 0.56
C12orf56-201ENST00000333722 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
C12orf56-201ENST00000333722 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
C12orf56-201ENST00000333722 FHAD1B1AJZ9 1412 aa18.55■□□□□ 0.56
C12orf56-201ENST00000333722 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
C12orf56-201ENST00000333722 FOXD1Q16676 465 aa18.54■□□□□ 0.56
C12orf56-201ENST00000333722 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.55
C12orf56-201ENST00000333722 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
C12orf56-201ENST00000333722 PHLDB1Q86UU1 1377 aa18.48■□□□□ 0.55
C12orf56-201ENST00000333722 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
C12orf56-201ENST00000333722 KCNH8Q96L42 1107 aa18.47■□□□□ 0.55
C12orf56-201ENST00000333722 ANP32CO43423 234 aa18.46■□□□□ 0.55
C12orf56-201ENST00000333722 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
C12orf56-201ENST00000333722 SETD5Q9C0A6 1442 aa18.44■□□□□ 0.54
C12orf56-201ENST00000333722 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
C12orf56-201ENST00000333722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
C12orf56-201ENST00000333722 CFDP1Q9UEE9 299 aaPredicted RBP18.42■□□□□ 0.54
C12orf56-201ENST00000333722 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
C12orf56-201ENST00000333722 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
C12orf56-201ENST00000333722 NEFLP07196 543 aa18.41■□□□□ 0.54
C12orf56-201ENST00000333722 PELP1Q8IZL8 1130 aaKnown RBP18.41■□□□□ 0.54
C12orf56-201ENST00000333722 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
C12orf56-201ENST00000333722 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
C12orf56-201ENST00000333722 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
C12orf56-201ENST00000333722 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
C12orf56-201ENST00000333722 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
C12orf56-201ENST00000333722 CLSPNQ9HAW4 1339 aa18.32■□□□□ 0.52
C12orf56-201ENST00000333722 LRRC9Q6ZRR7 1453 aa18.31■□□□□ 0.52
C12orf56-201ENST00000333722 TSPY4P0CV99 314 aa18.3■□□□□ 0.52
C12orf56-201ENST00000333722 TSPY10P0CW01 314 aa18.3■□□□□ 0.52
C12orf56-201ENST00000333722 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
C12orf56-201ENST00000333722 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
C12orf56-201ENST00000333722 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
C12orf56-201ENST00000333722 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
C12orf56-201ENST00000333722 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
C12orf56-201ENST00000333722 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
C12orf56-201ENST00000333722 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
C12orf56-201ENST00000333722 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
C12orf56-201ENST00000333722 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
C12orf56-201ENST00000333722 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
C12orf56-201ENST00000333722 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
C12orf56-201ENST00000333722 MPHOSPH9Q99550 1183 aa18.2■□□□□ 0.5
C12orf56-201ENST00000333722 FKBP8Q14318 412 aa18.19■□□□□ 0.5
C12orf56-201ENST00000333722 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.5
C12orf56-201ENST00000333722 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
C12orf56-201ENST00000333722 HNRNPMP52272 730 aaKnown RBP eCLIP18.17■□□□□ 0.5
C12orf56-201ENST00000333722 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
C12orf56-201ENST00000333722 CASKIN1Q8WXD9 1431 aa18.16■□□□□ 0.5
C12orf56-201ENST00000333722 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
C12orf56-201ENST00000333722 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
C12orf56-201ENST00000333722 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.49
C12orf56-201ENST00000333722 TIAM1Q13009 1591 aa18.13■□□□□ 0.49
C12orf56-201ENST00000333722 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
C12orf56-201ENST00000333722 PKD2Q13563 968 aa18.12■□□□□ 0.49
C12orf56-201ENST00000333722 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
C12orf56-201ENST00000333722 PCF11O94913 1555 aaKnown RBP18.1■□□□□ 0.49
C12orf56-201ENST00000333722 CHGAP10645 457 aaKnown RBP18.08■□□□□ 0.49
C12orf56-201ENST00000333722 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
C12orf56-201ENST00000333722 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
C12orf56-201ENST00000333722 GRIN2BQ13224 1484 aa18.06■□□□□ 0.48
C12orf56-201ENST00000333722 MRC2Q9UBG0 1479 aa18.06■□□□□ 0.48
C12orf56-201ENST00000333722 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
C12orf56-201ENST00000333722 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
C12orf56-201ENST00000333722 FYCO1Q9BQS8 1478 aa18.04■□□□□ 0.48
C12orf56-201ENST00000333722 CARMIL2Q6F5E8 1435 aa18.04■□□□□ 0.48
C12orf56-201ENST00000333722 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
C12orf56-201ENST00000333722 DCAF11Q8TEB1 546 aa18.03■□□□□ 0.48
C12orf56-201ENST00000333722 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
C12orf56-201ENST00000333722 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
C12orf56-201ENST00000333722 NUP155O75694 1391 aa17.99■□□□□ 0.47
C12orf56-201ENST00000333722 PRG4Q92954 1404 aaPredicted RBP17.99■□□□□ 0.47
C12orf56-201ENST00000333722 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
C12orf56-201ENST00000333722 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
C12orf56-201ENST00000333722 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
C12orf56-201ENST00000333722 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
C12orf56-201ENST00000333722 PTPRGP23470 1445 aa17.94■□□□□ 0.46
C12orf56-201ENST00000333722 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
C12orf56-201ENST00000333722 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
C12orf56-201ENST00000333722 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
C12orf56-201ENST00000333722 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
C12orf56-201ENST00000333722 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
C12orf56-201ENST00000333722 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
C12orf56-201ENST00000333722 UACAQ9BZF9 1416 aa17.89■□□□□ 0.45
C12orf56-201ENST00000333722 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
C12orf56-201ENST00000333722 NAIPQ13075 1403 aa17.88■□□□□ 0.45
C12orf56-201ENST00000333722 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
C12orf56-201ENST00000333722 ANKRD30AQ9BXX3 1397 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms