RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 CCNB3Q8WWL7 1395 aa26.34■■□□□ 1.81
TRIM50-201ENST00000333149 POLA1P09884 1462 aaPredicted RBP26.34■■□□□ 1.81
TRIM50-201ENST00000333149 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
TRIM50-201ENST00000333149 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
TRIM50-201ENST00000333149 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
TRIM50-201ENST00000333149 YTHDC1Q96MU7 727 aaKnown RBP26.25■■□□□ 1.79
TRIM50-201ENST00000333149 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
TRIM50-201ENST00000333149 TIAM1Q13009 1591 aa26.23■■□□□ 1.79
TRIM50-201ENST00000333149 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.78
TRIM50-201ENST00000333149 WDR62O43379 1518 aa26.19■■□□□ 1.78
TRIM50-201ENST00000333149 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.77
TRIM50-201ENST00000333149 LRRC9Q6ZRR7 1453 aa26.12■■□□□ 1.77
TRIM50-201ENST00000333149 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
TRIM50-201ENST00000333149 RAB3GAP2Q9H2M9 1393 aa26.08■■□□□ 1.77
TRIM50-201ENST00000333149 WDR97A6NE52 1622 aa26.08■■□□□ 1.77
TRIM50-201ENST00000333149 TARBP1Q13395 1621 aaKnown RBP26.08■■□□□ 1.77
TRIM50-201ENST00000333149 CFAP43Q8NDM7 1665 aa26.05■■□□□ 1.76
TRIM50-201ENST00000333149 MAPKBP1O60336 1514 aa26.05■■□□□ 1.76
TRIM50-201ENST00000333149 TDRD9Q8NDG6 1382 aaKnown RBP26.04■■□□□ 1.76
TRIM50-201ENST00000333149 SETD5Q9C0A6 1442 aa26.03■■□□□ 1.76
TRIM50-201ENST00000333149 PHLDB1Q86UU1 1377 aa26■■□□□ 1.75
TRIM50-201ENST00000333149 IFT140Q96RY7 1462 aa26■■□□□ 1.75
TRIM50-201ENST00000333149 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
TRIM50-201ENST00000333149 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
TRIM50-201ENST00000333149 ITGAEP38570 1179 aa25.97■■□□□ 1.75
TRIM50-201ENST00000333149 PCF11O94913 1555 aaKnown RBP25.96■■□□□ 1.75
TRIM50-201ENST00000333149 EFCAB5A4FU69 1503 aa25.96■■□□□ 1.75
TRIM50-201ENST00000333149 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.744e-8■■■■■ 31.9
TRIM50-201ENST00000333149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.93■■□□□ 1.74
TRIM50-201ENST00000333149 FYCO1Q9BQS8 1478 aa25.92■■□□□ 1.74
TRIM50-201ENST00000333149 CUL7Q14999 1698 aa25.91■■□□□ 1.74
TRIM50-201ENST00000333149 CASKIN1Q8WXD9 1431 aa25.89■■□□□ 1.74
TRIM50-201ENST00000333149 ZNF608Q9ULD9 1512 aaPredicted RBP25.87■■□□□ 1.73
TRIM50-201ENST00000333149 TIMELESSQ9UNS1 1208 aa25.87■■□□□ 1.73
TRIM50-201ENST00000333149 CTTNBP2Q8WZ74 1663 aa25.83■■□□□ 1.73
TRIM50-201ENST00000333149 FHOD3Q2V2M9 1422 aa25.83■■□□□ 1.73
TRIM50-201ENST00000333149 FAM50AQ14320 339 aaKnown RBP25.8■■□□□ 1.72
TRIM50-201ENST00000333149 P3H3Q8IVL6 736 aa25.78■■□□□ 1.72
TRIM50-201ENST00000333149 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
TRIM50-201ENST00000333149 PBRM1Q86U86 1689 aa25.78■■□□□ 1.72
TRIM50-201ENST00000333149 FMN1Q68DA7 1419 aa25.77■■□□□ 1.72
TRIM50-201ENST00000333149 EIF4G3O43432 1585 aaKnown RBP25.75■■□□□ 1.71
TRIM50-201ENST00000333149 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
TRIM50-201ENST00000333149 SIN3AQ96ST3 1273 aa25.7■■□□□ 1.7
TRIM50-201ENST00000333149 MYT1Q01538 1121 aa25.7■■□□□ 1.7
TRIM50-201ENST00000333149 FGD6Q6ZV73 1430 aa25.68■■□□□ 1.7
TRIM50-201ENST00000333149 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
TRIM50-201ENST00000333149 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
TRIM50-201ENST00000333149 SUPT16HQ9Y5B9 1047 aaKnown RBP25.67■■□□□ 1.7
TRIM50-201ENST00000333149 PPP1R15AO75807 674 aaPredicted RBP25.64■■□□□ 1.69
TRIM50-201ENST00000333149 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
TRIM50-201ENST00000333149 HFM1A2PYH4 1435 aa25.59■■□□□ 1.69
TRIM50-201ENST00000333149 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
TRIM50-201ENST00000333149 MTUS2Q5JR59 1369 aa25.57■■□□□ 1.68
TRIM50-201ENST00000333149 LRRIQ1Q96JM4 1722 aa25.55■■□□□ 1.68
TRIM50-201ENST00000333149 UACAQ9BZF9 1416 aa25.55■■□□□ 1.68
TRIM50-201ENST00000333149 CCDC18Q5T9S5 1454 aa25.54■■□□□ 1.68
TRIM50-201ENST00000333149 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
TRIM50-201ENST00000333149 KCNH8Q96L42 1107 aa25.53■■□□□ 1.68
TRIM50-201ENST00000333149 PTPRKQ15262 1439 aa25.53■■□□□ 1.68
TRIM50-201ENST00000333149 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
TRIM50-201ENST00000333149 MYOM3Q5VTT5 1437 aa25.52■■□□□ 1.68
TRIM50-201ENST00000333149 NCOA2Q15596 1464 aa25.51■■□□□ 1.67
TRIM50-201ENST00000333149 EHBP1L1Q8N3D4 1523 aa25.49■■□□□ 1.67
TRIM50-201ENST00000333149 SUPT6HQ7KZ85 1726 aaKnown RBP25.48■■□□□ 1.67
TRIM50-201ENST00000333149 SYNJ2O15056 1496 aa25.48■■□□□ 1.67
TRIM50-201ENST00000333149 ARHGEF11O15085 1522 aa25.48■■□□□ 1.67
TRIM50-201ENST00000333149 NAIPQ13075 1403 aa25.47■■□□□ 1.67
TRIM50-201ENST00000333149 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
TRIM50-201ENST00000333149 CCER2I3L3R5 266 aa25.47■■□□□ 1.67
TRIM50-201ENST00000333149 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
TRIM50-201ENST00000333149 UGGT2Q9NYU1 1516 aa25.44■■□□□ 1.66
TRIM50-201ENST00000333149 TONSLQ96HA7 1378 aa25.43■■□□□ 1.66
TRIM50-201ENST00000333149 FBLN2P98095 1184 aa25.43■■□□□ 1.66
TRIM50-201ENST00000333149 TCOF1Q13428 1488 aaKnown RBP25.38■■□□□ 1.65
TRIM50-201ENST00000333149 MAGI3Q5TCQ9 1506 aa25.35■■□□□ 1.65
TRIM50-201ENST00000333149 KDM5BQ9UGL1 1544 aa25.35■■□□□ 1.65
TRIM50-201ENST00000333149 ANP32CO43423 234 aa25.34■■□□□ 1.65
TRIM50-201ENST00000333149 AKNAQ7Z591 1439 aa25.33■■□□□ 1.65
TRIM50-201ENST00000333149 IQGAP2Q13576 1575 aa25.33■■□□□ 1.65
TRIM50-201ENST00000333149 KIAA0586Q9BVV6 1533 aa25.33■■□□□ 1.65
TRIM50-201ENST00000333149 HECW1Q76N89 1606 aa25.31■■□□□ 1.64
TRIM50-201ENST00000333149 HIRIP3Q9BW71 556 aaPredicted RBP25.3■■□□□ 1.64
TRIM50-201ENST00000333149 GCC2Q8IWJ2 1684 aa25.3■■□□□ 1.64
TRIM50-201ENST00000333149 CEP170Q5SW79 1584 aa25.29■■□□□ 1.64
TRIM50-201ENST00000333149 NUP160Q12769 1436 aa25.28■■□□□ 1.64
TRIM50-201ENST00000333149 TSHZ2Q9NRE2 1034 aa25.27■■□□□ 1.64
TRIM50-201ENST00000333149 MIA2Q96PC5 1412 aa25.26■■□□□ 1.63
TRIM50-201ENST00000333149 EPRSP07814 1512 aaKnown RBP25.24■■□□□ 1.63
TRIM50-201ENST00000333149 DENND4BO75064 1496 aaPredicted RBP25.22■■□□□ 1.63
TRIM50-201ENST00000333149 CHD1O14646 1710 aa25.21■■□□□ 1.63
TRIM50-201ENST00000333149 FKBP8Q14318 412 aa25.16■■□□□ 1.62
TRIM50-201ENST00000333149 RRP7BPQ9NSQ0 103 aa25.15■■□□□ 1.62
TRIM50-201ENST00000333149 JPH4Q96JJ6 628 aa25.14■■□□□ 1.62
TRIM50-201ENST00000333149 KDM6BO15054 1643 aa25.12■■□□□ 1.61
TRIM50-201ENST00000333149 DISP1Q96F81 1524 aa25.11■■□□□ 1.61
TRIM50-201ENST00000333149 CDK13Q14004 1512 aaKnown RBP25.1■■□□□ 1.61
TRIM50-201ENST00000333149 ROCK1Q13464 1354 aa25.09■■□□□ 1.61
TRIM50-201ENST00000333149 TRIM52Q96A61 297 aa25.08■■□□□ 1.61
TRIM50-201ENST00000333149 CHIC2Q9UKJ5 165 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms