RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 ANP32CO43423 234 aa16.72■□□□□ 0.27
EFCAB13-201ENST00000331493 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
EFCAB13-201ENST00000331493 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
EFCAB13-201ENST00000331493 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
EFCAB13-201ENST00000331493 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
EFCAB13-201ENST00000331493 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
EFCAB13-201ENST00000331493 RRP7BPQ9NSQ0 103 aa16.69■□□□□ 0.26
EFCAB13-201ENST00000331493 ERICH3Q5RHP9 1530 aa16.68■□□□□ 0.26
EFCAB13-201ENST00000331493 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
EFCAB13-201ENST00000331493 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
EFCAB13-201ENST00000331493 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
EFCAB13-201ENST00000331493 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
EFCAB13-201ENST00000331493 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
EFCAB13-201ENST00000331493 CFTRP13569 1480 aa16.65■□□□□ 0.26
EFCAB13-201ENST00000331493 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
EFCAB13-201ENST00000331493 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
EFCAB13-201ENST00000331493 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
EFCAB13-201ENST00000331493 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
EFCAB13-201ENST00000331493 SENP3-EIF4A1A0A087X0R7 540 aa16.58■□□□□ 0.24
EFCAB13-201ENST00000331493 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
EFCAB13-201ENST00000331493 PPP1R15AO75807 674 aaPredicted RBP16.56■□□□□ 0.24
EFCAB13-201ENST00000331493 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
EFCAB13-201ENST00000331493 MYT1Q01538 1121 aa16.56■□□□□ 0.24
EFCAB13-201ENST00000331493 FOXD1Q16676 465 aa16.56■□□□□ 0.24
EFCAB13-201ENST00000331493 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
EFCAB13-201ENST00000331493 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
EFCAB13-201ENST00000331493 LRRC9Q6ZRR7 1453 aa16.55■□□□□ 0.24
EFCAB13-201ENST00000331493 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
EFCAB13-201ENST00000331493 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
EFCAB13-201ENST00000331493 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
EFCAB13-201ENST00000331493 NESP48681 1621 aa16.51■□□□□ 0.23
EFCAB13-201ENST00000331493 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
EFCAB13-201ENST00000331493 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
EFCAB13-201ENST00000331493 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
EFCAB13-201ENST00000331493 FBLN2P98095 1184 aa16.46■□□□□ 0.23
EFCAB13-201ENST00000331493 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
EFCAB13-201ENST00000331493 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
EFCAB13-201ENST00000331493 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
EFCAB13-201ENST00000331493 HSPA5P11021 654 aaKnown RBP16.39■□□□□ 0.22
EFCAB13-201ENST00000331493 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
EFCAB13-201ENST00000331493 CCDC18Q5T9S5 1454 aa16.36■□□□□ 0.21
EFCAB13-201ENST00000331493 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
EFCAB13-201ENST00000331493 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
EFCAB13-201ENST00000331493 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
EFCAB13-201ENST00000331493 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
EFCAB13-201ENST00000331493 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
EFCAB13-201ENST00000331493 MRS2Q9HD23 443 aa16.34■□□□□ 0.21
EFCAB13-201ENST00000331493 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
EFCAB13-201ENST00000331493 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.21
EFCAB13-201ENST00000331493 CCER2I3L3R5 266 aa16.32■□□□□ 0.2
EFCAB13-201ENST00000331493 L3MBTL2Q969R5 705 aa16.32■□□□□ 0.2
EFCAB13-201ENST00000331493 RBM19Q9Y4C8 960 aaKnown RBP16.31■□□□□ 0.2
EFCAB13-201ENST00000331493 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
EFCAB13-201ENST00000331493 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
EFCAB13-201ENST00000331493 MPHOSPH9Q99550 1183 aa16.3■□□□□ 0.2
EFCAB13-201ENST00000331493 PTPRKQ15262 1439 aa16.3■□□□□ 0.2
EFCAB13-201ENST00000331493 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
EFCAB13-201ENST00000331493 ANP32EQ9BTT0 268 aa16.28■□□□□ 0.2
EFCAB13-201ENST00000331493 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
EFCAB13-201ENST00000331493 ZNF644Q9H582 1327 aaPredicted RBP16.28■□□□□ 0.2
EFCAB13-201ENST00000331493 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
EFCAB13-201ENST00000331493 KDM2AQ9Y2K7 1162 aa16.26■□□□□ 0.19
EFCAB13-201ENST00000331493 NCOA2Q15596 1464 aa16.26■□□□□ 0.19
EFCAB13-201ENST00000331493 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
EFCAB13-201ENST00000331493 WASHC2AQ641Q2 1341 aa16.24■□□□□ 0.19
EFCAB13-201ENST00000331493 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
EFCAB13-201ENST00000331493 B4GALNT3Q6L9W6 998 aa16.23■□□□□ 0.19
EFCAB13-201ENST00000331493 UACAQ9BZF9 1416 aa16.23■□□□□ 0.19
EFCAB13-201ENST00000331493 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.192e-8■■■■■ 42.3
EFCAB13-201ENST00000331493 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
EFCAB13-201ENST00000331493 MAP3K1Q13233 1512 aa16.21■□□□□ 0.18
EFCAB13-201ENST00000331493 NAIPQ13075 1403 aa16.2■□□□□ 0.18
EFCAB13-201ENST00000331493 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
EFCAB13-201ENST00000331493 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
EFCAB13-201ENST00000331493 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
EFCAB13-201ENST00000331493 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
EFCAB13-201ENST00000331493 HFM1A2PYH4 1435 aa16.17■□□□□ 0.18
EFCAB13-201ENST00000331493 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
EFCAB13-201ENST00000331493 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
EFCAB13-201ENST00000331493 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
EFCAB13-201ENST00000331493 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
EFCAB13-201ENST00000331493 EFCAB5A4FU69 1503 aa16.13■□□□□ 0.17
EFCAB13-201ENST00000331493 PRKRIP1Q9H875 184 aaPredicted RBP16.12■□□□□ 0.17
EFCAB13-201ENST00000331493 CDK13Q14004 1512 aaKnown RBP16.11■□□□□ 0.17
EFCAB13-201ENST00000331493 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
EFCAB13-201ENST00000331493 PKD2Q13563 968 aa16.1■□□□□ 0.17
EFCAB13-201ENST00000331493 RGL3Q3MIN7 710 aa16.1■□□□□ 0.17
EFCAB13-201ENST00000331493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
EFCAB13-201ENST00000331493 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
EFCAB13-201ENST00000331493 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.17
EFCAB13-201ENST00000331493 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
EFCAB13-201ENST00000331493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.16
EFCAB13-201ENST00000331493 KIF7Q2M1P5 1343 aa16.05■□□□□ 0.16
EFCAB13-201ENST00000331493 PPP4R2Q9NY27 417 aa16.05■□□□□ 0.16
EFCAB13-201ENST00000331493 CARD11Q9BXL7 1154 aa16.04■□□□□ 0.16
EFCAB13-201ENST00000331493 PRDM2Q13029 1718 aa16.04■□□□□ 0.16
EFCAB13-201ENST00000331493 CCDC136Q96JN2 1154 aa16.03■□□□□ 0.16
EFCAB13-201ENST00000331493 CCDC7Q96M83 1385 aa16.03■□□□□ 0.16
EFCAB13-201ENST00000331493 CUL7Q14999 1698 aa16.02■□□□□ 0.15
EFCAB13-201ENST00000331493 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms