RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 TRIOO75962 3097 aa4.98□□□□□ -1.61
RGPD6-201ENST00000329516 RAPGEF2Q9Y4G8 1499 aa4.98□□□□□ -1.61
RGPD6-201ENST00000329516 WDR87Q6ZQQ6 2873 aa4.97□□□□□ -1.61
RGPD6-201ENST00000329516 NCAPD3P42695 1498 aa4.97□□□□□ -1.61
RGPD6-201ENST00000329516 CELSR3Q9NYQ7 3312 aa4.95□□□□□ -1.62
RGPD6-201ENST00000329516 A0A0C4DFX4 3053 aa4.95□□□□□ -1.62
RGPD6-201ENST00000329516 E9PCH4 1651 aa4.95□□□□□ -1.62
RGPD6-201ENST00000329516 BCORL1Q5H9F3 1711 aa4.95□□□□□ -1.62
RGPD6-201ENST00000329516 ARHGAP35Q9NRY4 1499 aa4.94□□□□□ -1.62
RGPD6-201ENST00000329516 CUL7Q14999 1698 aa4.93□□□□□ -1.62
RGPD6-201ENST00000329516 LAMA1P25391 3075 aa4.93□□□□□ -1.62
RGPD6-201ENST00000329516 VPS13AQ96RL7 3174 aa4.92□□□□□ -1.62
RGPD6-201ENST00000329516 URB2Q14146 1524 aaKnown RBP4.91□□□□□ -1.62
RGPD6-201ENST00000329516 KIF21AQ7Z4S6 1674 aa4.9□□□□□ -1.62
RGPD6-201ENST00000329516 POLR1AO95602 1720 aaPredicted RBP4.9□□□□□ -1.63
RGPD6-201ENST00000329516 THOC2Q8NI27 1593 aaKnown RBP4.89□□□□□ -1.63
RGPD6-201ENST00000329516 CFAP47Q6ZTR5 3102 aa4.89□□□□□ -1.63
RGPD6-201ENST00000329516 SCAF1Q9H7N4 1312 aaKnown RBP4.88□□□□□ -1.63
RGPD6-201ENST00000329516 RELNP78509 3460 aa4.88□□□□□ -1.63
RGPD6-201ENST00000329516 HRCP23327 699 aa4.88□□□□□ -1.63
RGPD6-201ENST00000329516 CLIP1P30622 1438 aa4.88□□□□□ -1.63
RGPD6-201ENST00000329516 FREM2Q5SZK8 3169 aa4.88□□□□□ -1.63
RGPD6-201ENST00000329516 MBD5Q9P267 1494 aa4.87□□□□□ -1.63
RGPD6-201ENST00000329516 MROH1Q8NDA8 1641 aa4.87□□□□□ -1.63
RGPD6-201ENST00000329516 SPATA31E1Q6ZUB1 1445 aa4.86□□□□□ -1.63
RGPD6-201ENST00000329516 ERICH3Q5RHP9 1530 aa4.86□□□□□ -1.63
RGPD6-201ENST00000329516 C5orf42Q9H799 3197 aa4.86□□□□□ -1.63
RGPD6-201ENST00000329516 SMG1Q96Q15 3661 aaKnown RBP4.86□□□□□ -1.63
RGPD6-201ENST00000329516 PPRC1Q5VV67 1664 aaKnown RBP4.85□□□□□ -1.63
RGPD6-201ENST00000329516 CDC42BPAQ5VT25 1732 aa4.85□□□□□ -1.63
RGPD6-201ENST00000329516 RRBP1Q9P2E9 1410 aaKnown RBP4.85□□□□□ -1.63
RGPD6-201ENST00000329516 NESP48681 1621 aa4.85□□□□□ -1.63
RGPD6-201ENST00000329516 SHROOM2Q13796 1616 aa4.83□□□□□ -1.64
RGPD6-201ENST00000329516 MYOM1P52179 1685 aa4.83□□□□□ -1.64
RGPD6-201ENST00000329516 DISP1Q96F81 1524 aa4.83□□□□□ -1.64
RGPD6-201ENST00000329516 ZNF518AQ6AHZ1 1483 aa4.82□□□□□ -1.64
RGPD6-201ENST00000329516 TUBGCP6Q96RT7 1819 aa4.82□□□□□ -1.64
RGPD6-201ENST00000329516 MARF1Q9Y4F3 1742 aaKnown RBP4.81□□□□□ -1.64
RGPD6-201ENST00000329516 GOLGA3Q08378 1498 aa4.81□□□□□ -1.64
RGPD6-201ENST00000329516 ERCC6L2Q5T890 1561 aa4.81□□□□□ -1.64
RGPD6-201ENST00000329516 SETD1AO15047 1707 aaKnown RBP4.81□□□□□ -1.64
RGPD6-201ENST00000329516 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
RGPD6-201ENST00000329516 PCF11O94913 1555 aaKnown RBP4.8□□□□□ -1.64
RGPD6-201ENST00000329516 MAP3K1Q13233 1512 aa4.8□□□□□ -1.64
RGPD6-201ENST00000329516 LAMC3Q9Y6N6 1575 aa4.8□□□□□ -1.64
RGPD6-201ENST00000329516 CROCC2H7BZ55 1655 aa4.8□□□□□ -1.64
RGPD6-201ENST00000329516 IFT172Q9UG01 1749 aa4.79□□□□□ -1.64
RGPD6-201ENST00000329516 GRIN2BQ13224 1484 aa4.79□□□□□ -1.64
RGPD6-201ENST00000329516 CC2D2AQ9P2K1 1620 aa4.79□□□□□ -1.64
RGPD6-201ENST00000329516 IGF1RP08069 1367 aa4.79□□□□□ -1.64
RGPD6-201ENST00000329516 SUPT6HQ7KZ85 1726 aaKnown RBP4.78□□□□□ -1.64
RGPD6-201ENST00000329516 PLA2R1Q13018 1463 aa4.78□□□□□ -1.64
RGPD6-201ENST00000329516 ARHGEF12Q9NZN5 1544 aa4.78□□□□□ -1.64
RGPD6-201ENST00000329516 ZNF608Q9ULD9 1512 aaPredicted RBP4.78□□□□□ -1.64
RGPD6-201ENST00000329516 ABCC10Q5T3U5 1492 aa4.78□□□□□ -1.64
RGPD6-201ENST00000329516 CDC42BPBQ9Y5S2 1711 aa4.77□□□□□ -1.65
RGPD6-201ENST00000329516 CTTNBP2Q8WZ74 1663 aa4.77□□□□□ -1.65
RGPD6-201ENST00000329516 CEP152O94986 1710 aa4.77□□□□□ -1.65
RGPD6-201ENST00000329516 ABCA10Q8WWZ4 1543 aa4.77□□□□□ -1.65
RGPD6-201ENST00000329516 ABCA8O94911 1581 aa4.76□□□□□ -1.65
RGPD6-201ENST00000329516 TIAM1Q13009 1591 aa4.76□□□□□ -1.65
RGPD6-201ENST00000329516 TRIM41Q8WV44 630 aa4.76□□□□□ -1.65
RGPD6-201ENST00000329516 ADCY10Q96PN6 1610 aa4.76□□□□□ -1.65
RGPD6-201ENST00000329516 POLA1P09884 1462 aaPredicted RBP4.76□□□□□ -1.65
RGPD6-201ENST00000329516 CSMD1Q96PZ7 3565 aa4.76□□□□□ -1.65
RGPD6-201ENST00000329516 GCC2Q8IWJ2 1684 aa4.75□□□□□ -1.65
RGPD6-201ENST00000329516 TEX14Q8IWB6 1497 aa4.75□□□□□ -1.65
RGPD6-201ENST00000329516 LAMA5O15230 3695 aa4.75□□□□□ -1.65
RGPD6-201ENST00000329516 CHD7Q9P2D1 2997 aa4.75□□□□□ -1.65
RGPD6-201ENST00000329516 DCHS1Q96JQ0 3298 aa4.74□□□□□ -1.65
RGPD6-201ENST00000329516 CAMSAP1Q5T5Y3 1602 aa4.74□□□□□ -1.65
RGPD6-201ENST00000329516 CEP162Q5TB80 1403 aa4.74□□□□□ -1.65
RGPD6-201ENST00000329516 VWDEQ8N2E2 1590 aa4.74□□□□□ -1.65
RGPD6-201ENST00000329516 SHPRHQ149N8 1683 aa4.74□□□□□ -1.65
RGPD6-201ENST00000329516 DHX57Q6P158 1386 aaKnown RBP4.73□□□□□ -1.65
RGPD6-201ENST00000329516 PBRM1Q86U86 1689 aa4.73□□□□□ -1.65
RGPD6-201ENST00000329516 PHLDB1Q86UU1 1377 aa4.73□□□□□ -1.65
RGPD6-201ENST00000329516 CEP170Q5SW79 1584 aa4.73□□□□□ -1.65
RGPD6-201ENST00000329516 MAGI2Q86UL8 1455 aa4.72□□□□□ -1.65
RGPD6-201ENST00000329516 KANK4Q5T7N3 995 aaPredicted RBP4.72□□□□□ -1.65
RGPD6-201ENST00000329516 FRYQ5TBA9 3013 aa4.72□□□□□ -1.65
RGPD6-201ENST00000329516 TNIKQ9UKE5 1360 aa4.71□□□□□ -1.65
RGPD6-201ENST00000329516 IQGAP2Q13576 1575 aa4.71□□□□□ -1.65
RGPD6-201ENST00000329516 RAPGEF6Q8TEU7 1601 aa4.71□□□□□ -1.66
RGPD6-201ENST00000329516 BAZ1BQ9UIG0 1483 aaKnown RBP4.71□□□□□ -1.66
RGPD6-201ENST00000329516 KIF14Q15058 1648 aa4.7□□□□□ -1.66
RGPD6-201ENST00000329516 CSMD2Q7Z408 3487 aa4.7□□□□□ -1.66
RGPD6-201ENST00000329516 TMEM131LA2VDJ0 1609 aa4.7□□□□□ -1.66
RGPD6-201ENST00000329516 DEPDC5O75140 1603 aa4.69□□□□□ -1.66
RGPD6-201ENST00000329516 RNF17Q9BXT8 1623 aaKnown RBP4.69□□□□□ -1.66
RGPD6-201ENST00000329516 TOPBP1Q92547 1522 aa4.69□□□□□ -1.66
RGPD6-201ENST00000329516 CEP164Q9UPV0 1460 aa4.69□□□□□ -1.66
RGPD6-201ENST00000329516 CHD9Q3L8U1 2897 aa4.69□□□□□ -1.66
RGPD6-201ENST00000329516 KCNH8Q96L42 1107 aa4.69□□□□□ -1.66
RGPD6-201ENST00000329516 TCOF1Q13428 1488 aaKnown RBP4.69□□□□□ -1.66
RGPD6-201ENST00000329516 UGGT2Q9NYU1 1516 aa4.69□□□□□ -1.66
RGPD6-201ENST00000329516 WDR62O43379 1518 aa4.68□□□□□ -1.66
RGPD6-201ENST00000329516 SPHKAPQ2M3C7 1700 aa4.68□□□□□ -1.66
RGPD6-201ENST00000329516 ADAMTS12P58397 1594 aa4.68□□□□□ -1.66
RGPD6-201ENST00000329516 FRMPD1Q5SYB0 1578 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms