RNA–Protein interactions for RNA: ENST00000326539.6

PRNT-201, Transcript of prion locus lncRNA, testis expressed, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNT, Length 2,333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNT-201ENST00000326539 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
PRNT-201ENST00000326539 HRCP23327 699 aa13.82□□□□□ -0.2
PRNT-201ENST00000326539 FBLN2P98095 1184 aa13.8□□□□□ -0.2
PRNT-201ENST00000326539 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
PRNT-201ENST00000326539 CLASP1Q7Z460 1538 aa13.77□□□□□ -0.21
PRNT-201ENST00000326539 UBE2Q2Q8WVN8 375 aa13.75□□□□□ -0.21
PRNT-201ENST00000326539 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRNT-201ENST00000326539 UBTFP17480 764 aaKnown RBP13.75□□□□□ -0.21
PRNT-201ENST00000326539 WIZO95785 1651 aa13.75□□□□□ -0.21
PRNT-201ENST00000326539 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
PRNT-201ENST00000326539 KDM2AQ9Y2K7 1162 aa13.73□□□□□ -0.21
PRNT-201ENST00000326539 KDM4FA0A1W2PPD8 638 aa13.72□□□□□ -0.21
PRNT-201ENST00000326539 CHMP4AQ9BY43 222 aa13.71□□□□□ -0.21
PRNT-201ENST00000326539 ZBTB22O15209 634 aa13.7□□□□□ -0.22
PRNT-201ENST00000326539 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
PRNT-201ENST00000326539 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
PRNT-201ENST00000326539 TARBP1Q13395 1621 aaKnown RBP13.67□□□□□ -0.22
PRNT-201ENST00000326539 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
PRNT-201ENST00000326539 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
PRNT-201ENST00000326539 TOP2AP11388 1531 aaKnown RBP13.65□□□□□ -0.22
PRNT-201ENST00000326539 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
PRNT-201ENST00000326539 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
PRNT-201ENST00000326539 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
PRNT-201ENST00000326539 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
PRNT-201ENST00000326539 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
PRNT-201ENST00000326539 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
PRNT-201ENST00000326539 PDE4CQ08493 712 aa13.56□□□□□ -0.24
PRNT-201ENST00000326539 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
PRNT-201ENST00000326539 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
PRNT-201ENST00000326539 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
PRNT-201ENST00000326539 CDK11AQ9UQ88 783 aaPredicted RBP13.54□□□□□ -0.24
PRNT-201ENST00000326539 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
PRNT-201ENST00000326539 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
PRNT-201ENST00000326539 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
PRNT-201ENST00000326539 WDR97A6NE52 1622 aa13.52□□□□□ -0.24
PRNT-201ENST00000326539 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
PRNT-201ENST00000326539 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
PRNT-201ENST00000326539 BRD2P25440 801 aaKnown RBP13.49□□□□□ -0.25
PRNT-201ENST00000326539 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
PRNT-201ENST00000326539 SOGA1O94964 1423 aa13.47□□□□□ -0.25
PRNT-201ENST00000326539 CCDC88BA6NC98 1476 aa13.47□□□□□ -0.25
PRNT-201ENST00000326539 FKBP8Q14318 412 aa13.47□□□□□ -0.25
PRNT-201ENST00000326539 GRIN2BQ13224 1484 aa13.46□□□□□ -0.26
PRNT-201ENST00000326539 DHX37Q8IY37 1157 aaKnown RBP13.46□□□□□ -0.26
PRNT-201ENST00000326539 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
PRNT-201ENST00000326539 KDM6BO15054 1643 aa13.44□□□□□ -0.26
PRNT-201ENST00000326539 FAM69CQ0P6D2 419 aa13.44□□□□□ -0.26
PRNT-201ENST00000326539 TAF7LQ5H9L4 462 aa13.44□□□□□ -0.26
PRNT-201ENST00000326539 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
PRNT-201ENST00000326539 IGSF3O75054 1194 aa13.42□□□□□ -0.26
PRNT-201ENST00000326539 NEFLP07196 543 aa13.41□□□□□ -0.26
PRNT-201ENST00000326539 LMTK3Q96Q04 1460 aa13.39□□□□□ -0.27
PRNT-201ENST00000326539 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
PRNT-201ENST00000326539 CEP170Q5SW79 1584 aa13.36□□□□□ -0.27
PRNT-201ENST00000326539 SOCS7O14512 581 aa13.34□□□□□ -0.27
PRNT-201ENST00000326539 DIP2BQ9P265 1576 aa13.34□□□□□ -0.27
PRNT-201ENST00000326539 HSP90B1P14625 803 aaKnown RBP13.33□□□□□ -0.28
PRNT-201ENST00000326539 MAPKBP1O60336 1514 aa13.33□□□□□ -0.28
PRNT-201ENST00000326539 PKNOX2Q96KN3 472 aa13.33□□□□□ -0.28
PRNT-201ENST00000326539 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
PRNT-201ENST00000326539 HMGB1P09429 215 aaKnown RBP13.31□□□□□ -0.28
PRNT-201ENST00000326539 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
PRNT-201ENST00000326539 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRNT-201ENST00000326539 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
PRNT-201ENST00000326539 NUP160Q12769 1436 aa13.28□□□□□ -0.28
PRNT-201ENST00000326539 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
PRNT-201ENST00000326539 ADRA2BP18089 450 aa13.25□□□□□ -0.29
PRNT-201ENST00000326539 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
PRNT-201ENST00000326539 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
PRNT-201ENST00000326539 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
PRNT-201ENST00000326539 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
PRNT-201ENST00000326539 PRG4Q92954 1404 aaPredicted RBP13.2□□□□□ -0.3
PRNT-201ENST00000326539 ABCA5Q8WWZ7 1642 aa13.18□□□□□ -0.3
PRNT-201ENST00000326539 PUS7Q96PZ0 661 aaKnown RBP13.18□□□□□ -0.3
PRNT-201ENST00000326539 CUX1P39880 1505 aa13.17□□□□□ -0.3
PRNT-201ENST00000326539 ABCA10Q8WWZ4 1543 aa13.15□□□□□ -0.3
PRNT-201ENST00000326539 FGD1P98174 961 aa13.14□□□□□ -0.31
PRNT-201ENST00000326539 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
PRNT-201ENST00000326539 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
PRNT-201ENST00000326539 ADAMTS12P58397 1594 aa13.14□□□□□ -0.31
PRNT-201ENST00000326539 DISP3Q9P2K9 1392 aa13.13□□□□□ -0.31
PRNT-201ENST00000326539 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
PRNT-201ENST00000326539 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
PRNT-201ENST00000326539 FHAD1B1AJZ9 1412 aa13.1□□□□□ -0.31
PRNT-201ENST00000326539 PPRC1Q5VV67 1664 aaKnown RBP13.09□□□□□ -0.31
PRNT-201ENST00000326539 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
PRNT-201ENST00000326539 NBR1Q14596 966 aa13.07□□□□□ -0.32
PRNT-201ENST00000326539 GLI2P10070 1586 aa13.06□□□□□ -0.32
PRNT-201ENST00000326539 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
PRNT-201ENST00000326539 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRNT-201ENST00000326539 RSPH4AQ5TD94 716 aa13.02□□□□□ -0.33
PRNT-201ENST00000326539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRNT-201ENST00000326539 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
PRNT-201ENST00000326539 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
PRNT-201ENST00000326539 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
PRNT-201ENST00000326539 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
PRNT-201ENST00000326539 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
PRNT-201ENST00000326539 TEX14Q8IWB6 1497 aa12.97□□□□□ -0.33
PRNT-201ENST00000326539 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
PRNT-201ENST00000326539 ASXL2Q76L83 1435 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms