RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
SRRM1-201ENST00000323848 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.69
SRRM1-201ENST00000323848 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.69
SRRM1-201ENST00000323848 KCNH8Q96L42 1107 aa19.33■□□□□ 0.68
SRRM1-201ENST00000323848 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
SRRM1-201ENST00000323848 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
SRRM1-201ENST00000323848 FOXD1Q16676 465 aa19.29■□□□□ 0.68
SRRM1-201ENST00000323848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.28■□□□□ 0.686e-7■■■□□ 14.9
SRRM1-201ENST00000323848 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
SRRM1-201ENST00000323848 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
SRRM1-201ENST00000323848 CUX1P39880 1505 aa19.26■□□□□ 0.67
SRRM1-201ENST00000323848 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
SRRM1-201ENST00000323848 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
SRRM1-201ENST00000323848 CFTRP13569 1480 aa19.24■□□□□ 0.67
SRRM1-201ENST00000323848 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
SRRM1-201ENST00000323848 NEFLP07196 543 aa19.21■□□□□ 0.67
SRRM1-201ENST00000323848 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
SRRM1-201ENST00000323848 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
SRRM1-201ENST00000323848 ANP32CO43423 234 aa19.19■□□□□ 0.66
SRRM1-201ENST00000323848 KIF21BO75037 1637 aa19.18■□□□□ 0.66
SRRM1-201ENST00000323848 RAB3GAP2Q9H2M9 1393 aa19.16■□□□□ 0.66
SRRM1-201ENST00000323848 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.667e-7■■■■□ 25.1
SRRM1-201ENST00000323848 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
SRRM1-201ENST00000323848 CFDP1Q9UEE9 299 aaPredicted RBP19.14■□□□□ 0.65
SRRM1-201ENST00000323848 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
SRRM1-201ENST00000323848 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
SRRM1-201ENST00000323848 TOP2BQ02880 1626 aa19.08■□□□□ 0.65
SRRM1-201ENST00000323848 RGL3Q3MIN7 710 aa19.08■□□□□ 0.64
SRRM1-201ENST00000323848 PRXQ9BXM0 1461 aa19.06■□□□□ 0.64
SRRM1-201ENST00000323848 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
SRRM1-201ENST00000323848 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
SRRM1-201ENST00000323848 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
SRRM1-201ENST00000323848 PHLDB1Q86UU1 1377 aa19.03■□□□□ 0.64
SRRM1-201ENST00000323848 DHX57Q6P158 1386 aaKnown RBP19.03■□□□□ 0.64
SRRM1-201ENST00000323848 MYT1Q01538 1121 aa19.03■□□□□ 0.64
SRRM1-201ENST00000323848 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
SRRM1-201ENST00000323848 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
SRRM1-201ENST00000323848 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.64
SRRM1-201ENST00000323848 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
SRRM1-201ENST00000323848 PEG3Q9GZU2 1588 aa19.01■□□□□ 0.63
SRRM1-201ENST00000323848 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
SRRM1-201ENST00000323848 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
SRRM1-201ENST00000323848 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
SRRM1-201ENST00000323848 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
SRRM1-201ENST00000323848 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
SRRM1-201ENST00000323848 IRX6P78412 446 aaPredicted RBP18.97■□□□□ 0.63
SRRM1-201ENST00000323848 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
SRRM1-201ENST00000323848 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
SRRM1-201ENST00000323848 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
SRRM1-201ENST00000323848 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
SRRM1-201ENST00000323848 FKBP8Q14318 412 aa18.91■□□□□ 0.62
SRRM1-201ENST00000323848 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.611e-9■■■■■ 32.3
SRRM1-201ENST00000323848 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
SRRM1-201ENST00000323848 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
SRRM1-201ENST00000323848 PPP1R15AO75807 674 aaPredicted RBP18.81■□□□□ 0.6
SRRM1-201ENST00000323848 NPM1P06748 294 aaKnown RBP eCLIP18.81■□□□□ 0.6
SRRM1-201ENST00000323848 PKD2Q13563 968 aa18.81■□□□□ 0.6
SRRM1-201ENST00000323848 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
SRRM1-201ENST00000323848 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
SRRM1-201ENST00000323848 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
SRRM1-201ENST00000323848 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
SRRM1-201ENST00000323848 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
SRRM1-201ENST00000323848 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
SRRM1-201ENST00000323848 HSPA5P11021 654 aaKnown RBP18.77■□□□□ 0.59
SRRM1-201ENST00000323848 DCAF11Q8TEB1 546 aa18.76■□□□□ 0.59
SRRM1-201ENST00000323848 CARD11Q9BXL7 1154 aa18.71■□□□□ 0.59
SRRM1-201ENST00000323848 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
SRRM1-201ENST00000323848 FGD6Q6ZV73 1430 aa18.69■□□□□ 0.58
SRRM1-201ENST00000323848 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
SRRM1-201ENST00000323848 CARMIL2Q6F5E8 1435 aa18.67■□□□□ 0.58
SRRM1-201ENST00000323848 ERICH6Q7L0X2 663 aa18.66■□□□□ 0.58
SRRM1-201ENST00000323848 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
SRRM1-201ENST00000323848 NUP155O75694 1391 aa18.66■□□□□ 0.58
SRRM1-201ENST00000323848 TMC1Q8TDI8 760 aa18.65■□□□□ 0.58
SRRM1-201ENST00000323848 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
SRRM1-201ENST00000323848 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
SRRM1-201ENST00000323848 CASKIN1Q8WXD9 1431 aa18.64■□□□□ 0.57
SRRM1-201ENST00000323848 NCOA2Q15596 1464 aa18.64■□□□□ 0.57
SRRM1-201ENST00000323848 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
SRRM1-201ENST00000323848 SUPT16HQ9Y5B9 1047 aaKnown RBP18.62■□□□□ 0.57
SRRM1-201ENST00000323848 PRDM2Q13029 1718 aa18.61■□□□□ 0.57
SRRM1-201ENST00000323848 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
SRRM1-201ENST00000323848 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
SRRM1-201ENST00000323848 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
SRRM1-201ENST00000323848 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
SRRM1-201ENST00000323848 MYOM3Q5VTT5 1437 aa18.58■□□□□ 0.57
SRRM1-201ENST00000323848 PRG4Q92954 1404 aaPredicted RBP18.58■□□□□ 0.57
SRRM1-201ENST00000323848 PTPRGP23470 1445 aa18.58■□□□□ 0.57
SRRM1-201ENST00000323848 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.57
SRRM1-201ENST00000323848 PCF11O94913 1555 aaKnown RBP18.58■□□□□ 0.57
SRRM1-201ENST00000323848 GGT6Q6P531 493 aa18.57■□□□□ 0.56
SRRM1-201ENST00000323848 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
SRRM1-201ENST00000323848 CC2D1BQ5T0F9 858 aaKnown RBP18.54■□□□□ 0.56
SRRM1-201ENST00000323848 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
SRRM1-201ENST00000323848 STAG3Q9UJ98 1225 aa18.54■□□□□ 0.56
SRRM1-201ENST00000323848 MLECQ14165 292 aa18.51■□□□□ 0.55
SRRM1-201ENST00000323848 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
SRRM1-201ENST00000323848 FYCO1Q9BQS8 1478 aa18.5■□□□□ 0.55
SRRM1-201ENST00000323848 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
SRRM1-201ENST00000323848 TNNT2P45379 298 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms