RNA–Protein interactions for RNA: ENST00000318887.7

C3orf38-201, Transcript of chromosome 3 open reading frame 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf38, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-201ENST00000318887 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
C3orf38-201ENST00000318887 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
C3orf38-201ENST00000318887 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
C3orf38-201ENST00000318887 SOGA1O94964 1423 aa18.27■□□□□ 0.52
C3orf38-201ENST00000318887 CUX2O14529 1486 aa18.27■□□□□ 0.51
C3orf38-201ENST00000318887 ITGAEP38570 1179 aa18.24■□□□□ 0.51
C3orf38-201ENST00000318887 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
C3orf38-201ENST00000318887 KCNH8Q96L42 1107 aa18.22■□□□□ 0.51
C3orf38-201ENST00000318887 RUSC2Q8N2Y8 1516 aa18.22■□□□□ 0.51
C3orf38-201ENST00000318887 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
C3orf38-201ENST00000318887 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
C3orf38-201ENST00000318887 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
C3orf38-201ENST00000318887 EEA1Q15075 1411 aa18.19■□□□□ 0.5
C3orf38-201ENST00000318887 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.5
C3orf38-201ENST00000318887 UBTFP17480 764 aaKnown RBP18.15■□□□□ 0.5
C3orf38-201ENST00000318887 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
C3orf38-201ENST00000318887 UBE2Q2Q8WVN8 375 aa18.15■□□□□ 0.5
C3orf38-201ENST00000318887 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
C3orf38-201ENST00000318887 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
C3orf38-201ENST00000318887 GOLGA3Q08378 1498 aa18.12■□□□□ 0.49
C3orf38-201ENST00000318887 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
C3orf38-201ENST00000318887 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
C3orf38-201ENST00000318887 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
C3orf38-201ENST00000318887 KIF27Q86VH2 1401 aa18.04■□□□□ 0.48
C3orf38-201ENST00000318887 CCER2I3L3R5 266 aa18.04■□□□□ 0.48
C3orf38-201ENST00000318887 GAPVD1Q14C86 1478 aa18.04■□□□□ 0.48
C3orf38-201ENST00000318887 VPS8Q8N3P4 1428 aa18.02■□□□□ 0.48
C3orf38-201ENST00000318887 FBLN2P98095 1184 aa18.02■□□□□ 0.47
C3orf38-201ENST00000318887 NOP58Q9Y2X3 529 aaKnown RBP18.01■□□□□ 0.47
C3orf38-201ENST00000318887 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
C3orf38-201ENST00000318887 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
C3orf38-201ENST00000318887 IGF1RP08069 1367 aa17.98■□□□□ 0.47
C3orf38-201ENST00000318887 CLIP1P30622 1438 aa17.97■□□□□ 0.47
C3orf38-201ENST00000318887 CCDC136Q96JN2 1154 aa17.97■□□□□ 0.47
C3orf38-201ENST00000318887 NBR1Q14596 966 aa17.95■□□□□ 0.46
C3orf38-201ENST00000318887 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
C3orf38-201ENST00000318887 SNAPC4Q5SXM2 1469 aa17.94■□□□□ 0.46
C3orf38-201ENST00000318887 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
C3orf38-201ENST00000318887 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
C3orf38-201ENST00000318887 PBRM1Q86U86 1689 aa17.92■□□□□ 0.46
C3orf38-201ENST00000318887 ANP32CO43423 234 aa17.89■□□□□ 0.46
C3orf38-201ENST00000318887 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.46
C3orf38-201ENST00000318887 PPP1R15AO75807 674 aaPredicted RBP17.89■□□□□ 0.45
C3orf38-201ENST00000318887 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
C3orf38-201ENST00000318887 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
C3orf38-201ENST00000318887 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
C3orf38-201ENST00000318887 IL27Q8NEV9 243 aa17.87■□□□□ 0.45
C3orf38-201ENST00000318887 KIF21BO75037 1637 aa17.85■□□□□ 0.45
C3orf38-201ENST00000318887 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
C3orf38-201ENST00000318887 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
C3orf38-201ENST00000318887 PAK3O75914 559 aaPredicted RBP17.83■□□□□ 0.44
C3orf38-201ENST00000318887 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
C3orf38-201ENST00000318887 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
C3orf38-201ENST00000318887 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
C3orf38-201ENST00000318887 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
C3orf38-201ENST00000318887 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
C3orf38-201ENST00000318887 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
C3orf38-201ENST00000318887 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
C3orf38-201ENST00000318887 RRBP1Q9P2E9 1410 aaKnown RBP17.77■□□□□ 0.43
C3orf38-201ENST00000318887 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
C3orf38-201ENST00000318887 ANP32AP39687 249 aaKnown RBP17.75■□□□□ 0.43
C3orf38-201ENST00000318887 CHD1O14646 1710 aa17.75■□□□□ 0.43
C3orf38-201ENST00000318887 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
C3orf38-201ENST00000318887 CUL7Q14999 1698 aa17.74■□□□□ 0.43
C3orf38-201ENST00000318887 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
C3orf38-201ENST00000318887 C11orf95C9JLR9 678 aaPredicted RBP17.72■□□□□ 0.43
C3orf38-201ENST00000318887 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
C3orf38-201ENST00000318887 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
C3orf38-201ENST00000318887 MAPKBP1O60336 1514 aa17.72■□□□□ 0.43
C3orf38-201ENST00000318887 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.43
C3orf38-201ENST00000318887 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
C3orf38-201ENST00000318887 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
C3orf38-201ENST00000318887 CEP170Q5SW79 1584 aa17.66■□□□□ 0.42
C3orf38-201ENST00000318887 B4GALNT3Q6L9W6 998 aa17.65■□□□□ 0.42
C3orf38-201ENST00000318887 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
C3orf38-201ENST00000318887 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
C3orf38-201ENST00000318887 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
C3orf38-201ENST00000318887 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
C3orf38-201ENST00000318887 PKNOX2Q96KN3 472 aa17.63■□□□□ 0.41
C3orf38-201ENST00000318887 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
C3orf38-201ENST00000318887 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
C3orf38-201ENST00000318887 NUP160Q12769 1436 aa17.57■□□□□ 0.4
C3orf38-201ENST00000318887 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
C3orf38-201ENST00000318887 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
C3orf38-201ENST00000318887 NEFMP07197 916 aa17.53■□□□□ 0.4
C3orf38-201ENST00000318887 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
C3orf38-201ENST00000318887 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.4
C3orf38-201ENST00000318887 HIRIP3Q9BW71 556 aaPredicted RBP17.52■□□□□ 0.4
C3orf38-201ENST00000318887 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.4
C3orf38-201ENST00000318887 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.39
C3orf38-201ENST00000318887 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
C3orf38-201ENST00000318887 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
C3orf38-201ENST00000318887 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
C3orf38-201ENST00000318887 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
C3orf38-201ENST00000318887 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
C3orf38-201ENST00000318887 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
C3orf38-201ENST00000318887 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
C3orf38-201ENST00000318887 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
C3orf38-201ENST00000318887 BRPF3Q9ULD4 1205 aa17.46■□□□□ 0.39
C3orf38-201ENST00000318887 ZBED9Q6R2W3 1325 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms