RNA–Protein interactions for RNA: ENST00000318837.6

IGSF3-201, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene IGSF3, Length 3,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-201ENST00000318837 IGF1RP08069 1367 aa13.98□□□□□ -0.17
IGSF3-201ENST00000318837 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
IGSF3-201ENST00000318837 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
IGSF3-201ENST00000318837 RRP7BPQ9NSQ0 103 aa13.97□□□□□ -0.17
IGSF3-201ENST00000318837 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
IGSF3-201ENST00000318837 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.18
IGSF3-201ENST00000318837 PRXQ9BXM0 1461 aa13.95□□□□□ -0.18
IGSF3-201ENST00000318837 ZNF326Q5BKZ1 582 aaKnown RBP13.95□□□□□ -0.18
IGSF3-201ENST00000318837 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
IGSF3-201ENST00000318837 CUX1P39880 1505 aa13.94□□□□□ -0.18
IGSF3-201ENST00000318837 NESP48681 1621 aa13.94□□□□□ -0.18
IGSF3-201ENST00000318837 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
IGSF3-201ENST00000318837 CFTRP13569 1480 aa13.93□□□□□ -0.18
IGSF3-201ENST00000318837 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
IGSF3-201ENST00000318837 ERICH3Q5RHP9 1530 aa13.93□□□□□ -0.18
IGSF3-201ENST00000318837 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
IGSF3-201ENST00000318837 FKBP8Q14318 412 aa13.92□□□□□ -0.18
IGSF3-201ENST00000318837 RAB3GAP2Q9H2M9 1393 aa13.92□□□□□ -0.18
IGSF3-201ENST00000318837 CHMP7Q8WUX9 453 aaPredicted RBP13.9□□□□□ -0.18
IGSF3-201ENST00000318837 NEFLP07196 543 aa13.88□□□□□ -0.19
IGSF3-201ENST00000318837 ANP32EQ9BTT0 268 aa13.87□□□□□ -0.19
IGSF3-201ENST00000318837 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
IGSF3-201ENST00000318837 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
IGSF3-201ENST00000318837 TONSLQ96HA7 1378 aa13.85□□□□□ -0.19
IGSF3-201ENST00000318837 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
IGSF3-201ENST00000318837 CC2D2AQ9P2K1 1620 aa13.84□□□□□ -0.19
IGSF3-201ENST00000318837 HMGXB3Q12766 1538 aa13.83□□□□□ -0.19
IGSF3-201ENST00000318837 FHAD1B1AJZ9 1412 aa13.82□□□□□ -0.2
IGSF3-201ENST00000318837 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
IGSF3-201ENST00000318837 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
IGSF3-201ENST00000318837 ANP32CO43423 234 aa13.81□□□□□ -0.2
IGSF3-201ENST00000318837 CDK11AQ9UQ88 783 aaPredicted RBP13.8□□□□□ -0.2
IGSF3-201ENST00000318837 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
IGSF3-201ENST00000318837 FOXD1Q16676 465 aa13.77□□□□□ -0.21
IGSF3-201ENST00000318837 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
IGSF3-201ENST00000318837 PHLDB1Q86UU1 1377 aa13.75□□□□□ -0.21
IGSF3-201ENST00000318837 ERCC6Q03468 1493 aa13.74□□□□□ -0.21
IGSF3-201ENST00000318837 PPP1R15AO75807 674 aaPredicted RBP13.74□□□□□ -0.21
IGSF3-201ENST00000318837 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
IGSF3-201ENST00000318837 LRRC9Q6ZRR7 1453 aa13.71□□□□□ -0.21
IGSF3-201ENST00000318837 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
IGSF3-201ENST00000318837 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
IGSF3-201ENST00000318837 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.22
IGSF3-201ENST00000318837 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.22
IGSF3-201ENST00000318837 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
IGSF3-201ENST00000318837 CFDP1Q9UEE9 299 aaPredicted RBP13.69□□□□□ -0.22
IGSF3-201ENST00000318837 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
IGSF3-201ENST00000318837 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
IGSF3-201ENST00000318837 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
IGSF3-201ENST00000318837 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
IGSF3-201ENST00000318837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.22
IGSF3-201ENST00000318837 FMN1Q68DA7 1419 aa13.67□□□□□ -0.22
IGSF3-201ENST00000318837 KDM2AQ9Y2K7 1162 aa13.67□□□□□ -0.22
IGSF3-201ENST00000318837 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
IGSF3-201ENST00000318837 HNRNPUQ00839 825 aaKnown RBP eCLIP13.64□□□□□ -0.23
IGSF3-201ENST00000318837 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
IGSF3-201ENST00000318837 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
IGSF3-201ENST00000318837 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
IGSF3-201ENST00000318837 TSPY4P0CV99 314 aa13.61□□□□□ -0.23
IGSF3-201ENST00000318837 TSPY10P0CW01 314 aa13.61□□□□□ -0.23
IGSF3-201ENST00000318837 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
IGSF3-201ENST00000318837 ZNF644Q9H582 1327 aaPredicted RBP13.6□□□□□ -0.23
IGSF3-201ENST00000318837 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
IGSF3-201ENST00000318837 PCF11O94913 1555 aaKnown RBP13.58□□□□□ -0.24
IGSF3-201ENST00000318837 EIF4G2P78344 907 aaKnown RBP eCLIP13.58□□□□□ -0.24
IGSF3-201ENST00000318837 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
IGSF3-201ENST00000318837 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
IGSF3-201ENST00000318837 MPHOSPH9Q99550 1183 aa13.55□□□□□ -0.24
IGSF3-201ENST00000318837 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
IGSF3-201ENST00000318837 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
IGSF3-201ENST00000318837 CCDC18Q5T9S5 1454 aa13.54□□□□□ -0.24
IGSF3-201ENST00000318837 FGD6Q6ZV73 1430 aa13.53□□□□□ -0.24
IGSF3-201ENST00000318837 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.24
IGSF3-201ENST00000318837 ABCA10Q8WWZ4 1543 aa13.52□□□□□ -0.24
IGSF3-201ENST00000318837 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
IGSF3-201ENST00000318837 SALL2Q9Y467 1007 aaPredicted RBP13.52□□□□□ -0.25
IGSF3-201ENST00000318837 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
IGSF3-201ENST00000318837 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
IGSF3-201ENST00000318837 MSH5O43196 834 aa13.5□□□□□ -0.25
IGSF3-201ENST00000318837 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
IGSF3-201ENST00000318837 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
IGSF3-201ENST00000318837 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
IGSF3-201ENST00000318837 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
IGSF3-201ENST00000318837 HNRNPMP52272 730 aaKnown RBP eCLIP13.48□□□□□ -0.25
IGSF3-201ENST00000318837 PKD2Q13563 968 aa13.48□□□□□ -0.25
IGSF3-201ENST00000318837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.48□□□□□ -0.25
IGSF3-201ENST00000318837 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
IGSF3-201ENST00000318837 PTPRKQ15262 1439 aa13.46□□□□□ -0.25
IGSF3-201ENST00000318837 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
IGSF3-201ENST00000318837 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
IGSF3-201ENST00000318837 MYOM3Q5VTT5 1437 aa13.45□□□□□ -0.26
IGSF3-201ENST00000318837 CCDC184Q52MB2 194 aa13.43□□□□□ -0.26
IGSF3-201ENST00000318837 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
IGSF3-201ENST00000318837 NAIPQ13075 1403 aa13.42□□□□□ -0.26
IGSF3-201ENST00000318837 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
IGSF3-201ENST00000318837 EFCAB5A4FU69 1503 aa13.42□□□□□ -0.26
IGSF3-201ENST00000318837 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
IGSF3-201ENST00000318837 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
IGSF3-201ENST00000318837 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
IGSF3-201ENST00000318837 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms