RNA–Protein interactions for RNA: ENST00000318584.9

FKRP-201, Transcript of fukutin related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FKRP, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-201ENST00000318584 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
FKRP-201ENST00000318584 BCL11AQ9H165 835 aa21.69■■□□□ 1.06
FKRP-201ENST00000318584 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
FKRP-201ENST00000318584 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
FKRP-201ENST00000318584 PPP1R15AO75807 674 aaPredicted RBP21.65■■□□□ 1.06
FKRP-201ENST00000318584 ARHGAP35Q9NRY4 1499 aa21.64■■□□□ 1.05
FKRP-201ENST00000318584 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
FKRP-201ENST00000318584 HNRNPUQ00839 825 aaKnown RBP eCLIP21.63■■□□□ 1.05
FKRP-201ENST00000318584 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
FKRP-201ENST00000318584 WDR97A6NE52 1622 aa21.62■■□□□ 1.05
FKRP-201ENST00000318584 NESP48681 1621 aa21.62■■□□□ 1.05
FKRP-201ENST00000318584 CNGB1Q14028 1251 aaPredicted RBP21.6■■□□□ 1.05
FKRP-201ENST00000318584 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
FKRP-201ENST00000318584 PHLDB1Q86UU1 1377 aa21.59■■□□□ 1.05
FKRP-201ENST00000318584 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
FKRP-201ENST00000318584 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
FKRP-201ENST00000318584 TONSLQ96HA7 1378 aa21.54■■□□□ 1.04
FKRP-201ENST00000318584 CFTRP13569 1480 aa21.54■■□□□ 1.04
FKRP-201ENST00000318584 CUX1P39880 1505 aa21.52■■□□□ 1.04
FKRP-201ENST00000318584 CUX2O14529 1486 aa21.52■■□□□ 1.03
FKRP-201ENST00000318584 CCER2I3L3R5 266 aa21.5■■□□□ 1.03
FKRP-201ENST00000318584 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
FKRP-201ENST00000318584 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
FKRP-201ENST00000318584 IGF1RP08069 1367 aa21.47■■□□□ 1.03
FKRP-201ENST00000318584 MSH5O43196 834 aa21.47■■□□□ 1.03
FKRP-201ENST00000318584 CHIC2Q9UKJ5 165 aa21.43■■□□□ 1.02
FKRP-201ENST00000318584 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
FKRP-201ENST00000318584 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
FKRP-201ENST00000318584 LRRC9Q6ZRR7 1453 aa21.41■■□□□ 1.02
FKRP-201ENST00000318584 SENP3-EIF4A1A0A087X0R7 540 aa21.41■■□□□ 1.02
FKRP-201ENST00000318584 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
FKRP-201ENST00000318584 RRP7BPQ9NSQ0 103 aa21.37■■□□□ 1.01
FKRP-201ENST00000318584 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
FKRP-201ENST00000318584 FHOD3Q2V2M9 1422 aa21.37■■□□□ 1.01
FKRP-201ENST00000318584 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
FKRP-201ENST00000318584 TIAM1Q13009 1591 aa21.34■■□□□ 1.01
FKRP-201ENST00000318584 POLR3GLQ9BT43 218 aa21.34■■□□□ 1.01
FKRP-201ENST00000318584 B4GALNT3Q6L9W6 998 aa21.33■■□□□ 1.01
FKRP-201ENST00000318584 CCDC184Q52MB2 194 aa21.32■■□□□ 1
FKRP-201ENST00000318584 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
FKRP-201ENST00000318584 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
FKRP-201ENST00000318584 MTUS2Q5JR59 1369 aa21.28■■□□□ 1
FKRP-201ENST00000318584 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
FKRP-201ENST00000318584 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
FKRP-201ENST00000318584 FOXD1Q16676 465 aa21.28■■□□□ 1
FKRP-201ENST00000318584 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
FKRP-201ENST00000318584 MRS2Q9HD23 443 aa21.25■□□□□ 0.99
FKRP-201ENST00000318584 WASHC2AQ641Q2 1341 aa21.22■□□□□ 0.99
FKRP-201ENST00000318584 NBR1Q14596 966 aa21.21■□□□□ 0.99
FKRP-201ENST00000318584 EIF4G2P78344 907 aaKnown RBP eCLIP21.2■□□□□ 0.98
FKRP-201ENST00000318584 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
FKRP-201ENST00000318584 PPP4R2Q9NY27 417 aa21.19■□□□□ 0.98
FKRP-201ENST00000318584 CCDC18Q5T9S5 1454 aa21.18■□□□□ 0.98
FKRP-201ENST00000318584 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
FKRP-201ENST00000318584 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
FKRP-201ENST00000318584 FANCIQ9NVI1 1328 aa21.14■□□□□ 0.97
FKRP-201ENST00000318584 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
FKRP-201ENST00000318584 C11orf95C9JLR9 678 aaPredicted RBP21.13■□□□□ 0.97
FKRP-201ENST00000318584 FGD6Q6ZV73 1430 aa21.12■□□□□ 0.97
FKRP-201ENST00000318584 TOPBP1Q92547 1522 aa21.11■□□□□ 0.97
FKRP-201ENST00000318584 L3MBTL2Q969R5 705 aa21.11■□□□□ 0.97
FKRP-201ENST00000318584 FBLN2P98095 1184 aa21.11■□□□□ 0.97
FKRP-201ENST00000318584 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
FKRP-201ENST00000318584 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
FKRP-201ENST00000318584 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.96
FKRP-201ENST00000318584 UACAQ9BZF9 1416 aa21.07■□□□□ 0.96
FKRP-201ENST00000318584 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
FKRP-201ENST00000318584 PRKRIP1Q9H875 184 aaPredicted RBP21.07■□□□□ 0.96
FKRP-201ENST00000318584 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
FKRP-201ENST00000318584 DEKP35659 375 aaKnown RBP21.05■□□□□ 0.96
FKRP-201ENST00000318584 MPHOSPH9Q99550 1183 aa21.03■□□□□ 0.96
FKRP-201ENST00000318584 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.95
FKRP-201ENST00000318584 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
FKRP-201ENST00000318584 NAIPQ13075 1403 aa21.01■□□□□ 0.95
FKRP-201ENST00000318584 CCDC136Q96JN2 1154 aa21■□□□□ 0.95
FKRP-201ENST00000318584 HFM1A2PYH4 1435 aa20.99■□□□□ 0.95
FKRP-201ENST00000318584 PAK3O75914 559 aaPredicted RBP20.99■□□□□ 0.95
FKRP-201ENST00000318584 SALL2Q9Y467 1007 aaPredicted RBP20.99■□□□□ 0.95
FKRP-201ENST00000318584 FMN1Q68DA7 1419 aa20.98■□□□□ 0.95
FKRP-201ENST00000318584 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
FKRP-201ENST00000318584 NOP58Q9Y2X3 529 aaKnown RBP20.96■□□□□ 0.95
FKRP-201ENST00000318584 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
FKRP-201ENST00000318584 NBPF8Q3BBV2 869 aa20.96■□□□□ 0.95
FKRP-201ENST00000318584 NPM2Q86SE8 214 aaKnown RBP20.96■□□□□ 0.95
FKRP-201ENST00000318584 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
FKRP-201ENST00000318584 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
FKRP-201ENST00000318584 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
FKRP-201ENST00000318584 NCOA2Q15596 1464 aa20.93■□□□□ 0.94
FKRP-201ENST00000318584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.94
FKRP-201ENST00000318584 ERICH6BQ5W0A0 696 aa20.91■□□□□ 0.94
FKRP-201ENST00000318584 CCDC7Q96M83 1385 aa20.91■□□□□ 0.94
FKRP-201ENST00000318584 ZBED9Q6R2W3 1325 aa20.91■□□□□ 0.94
FKRP-201ENST00000318584 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
FKRP-201ENST00000318584 CNTLNQ9NXG0 1405 aa20.9■□□□□ 0.94
FKRP-201ENST00000318584 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.93
FKRP-201ENST00000318584 KIF7Q2M1P5 1343 aa20.88■□□□□ 0.93
FKRP-201ENST00000318584 ANP32AP39687 249 aaKnown RBP20.88■□□□□ 0.93
FKRP-201ENST00000318584 CFAP43Q8NDM7 1665 aa20.88■□□□□ 0.93
FKRP-201ENST00000318584 AKNAQ7Z591 1439 aa20.88■□□□□ 0.93
FKRP-201ENST00000318584 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms