RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
CRAT-201ENST00000318080 WDR62O43379 1518 aa23.5■■□□□ 1.35
CRAT-201ENST00000318080 IGF1RP08069 1367 aa23.5■■□□□ 1.35
CRAT-201ENST00000318080 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
CRAT-201ENST00000318080 PRKCSHP14314 528 aaPredicted RBP23.45■■□□□ 1.34
CRAT-201ENST00000318080 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
CRAT-201ENST00000318080 WDR97A6NE52 1622 aa23.43■■□□□ 1.34
CRAT-201ENST00000318080 ZNF608Q9ULD9 1512 aaPredicted RBP23.42■■□□□ 1.34
CRAT-201ENST00000318080 TSHZ2Q9NRE2 1034 aa23.42■■□□□ 1.34
CRAT-201ENST00000318080 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
CRAT-201ENST00000318080 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
CRAT-201ENST00000318080 DHX57Q6P158 1386 aaKnown RBP23.39■■□□□ 1.33
CRAT-201ENST00000318080 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
CRAT-201ENST00000318080 CARMIL1Q5VZK9 1371 aa23.35■■□□□ 1.33
CRAT-201ENST00000318080 BCANQ96GW7 911 aa23.34■■□□□ 1.33
CRAT-201ENST00000318080 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
CRAT-201ENST00000318080 ANP32EQ9BTT0 268 aa23.31■■□□□ 1.32
CRAT-201ENST00000318080 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
CRAT-201ENST00000318080 ARAP1Q96P48 1450 aa23.27■■□□□ 1.31
CRAT-201ENST00000318080 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
CRAT-201ENST00000318080 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
CRAT-201ENST00000318080 ITGAEP38570 1179 aa23.22■■□□□ 1.31
CRAT-201ENST00000318080 CLSPNQ9HAW4 1339 aa23.21■■□□□ 1.31
CRAT-201ENST00000318080 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
CRAT-201ENST00000318080 PBRM1Q86U86 1689 aa23.18■■□□□ 1.3
CRAT-201ENST00000318080 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
CRAT-201ENST00000318080 CUL7Q14999 1698 aa23.12■■□□□ 1.29
CRAT-201ENST00000318080 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
CRAT-201ENST00000318080 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
CRAT-201ENST00000318080 FBLN2P98095 1184 aa23.07■■□□□ 1.28
CRAT-201ENST00000318080 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
CRAT-201ENST00000318080 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
CRAT-201ENST00000318080 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
CRAT-201ENST00000318080 FHAD1B1AJZ9 1412 aa23.04■■□□□ 1.28
CRAT-201ENST00000318080 FKBP8Q14318 412 aa23■■□□□ 1.27
CRAT-201ENST00000318080 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
CRAT-201ENST00000318080 RAB3GAP2Q9H2M9 1393 aa22.96■■□□□ 1.27
CRAT-201ENST00000318080 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
CRAT-201ENST00000318080 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
CRAT-201ENST00000318080 CTTNBP2Q8WZ74 1663 aa22.91■■□□□ 1.26
CRAT-201ENST00000318080 MAPKBP1O60336 1514 aa22.91■■□□□ 1.26
CRAT-201ENST00000318080 GRIN2AQ12879 1464 aa22.9■■□□□ 1.26
CRAT-201ENST00000318080 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
CRAT-201ENST00000318080 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.25
CRAT-201ENST00000318080 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
CRAT-201ENST00000318080 FHOD3Q2V2M9 1422 aa22.87■■□□□ 1.25
CRAT-201ENST00000318080 HIRIP3Q9BW71 556 aaPredicted RBP22.86■■□□□ 1.25
CRAT-201ENST00000318080 RBM19Q9Y4C8 960 aaKnown RBP22.86■■□□□ 1.25
CRAT-201ENST00000318080 CEP170Q5SW79 1584 aa22.81■■□□□ 1.24
CRAT-201ENST00000318080 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
CRAT-201ENST00000318080 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
CRAT-201ENST00000318080 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
CRAT-201ENST00000318080 SETD5Q9C0A6 1442 aa22.77■■□□□ 1.24
CRAT-201ENST00000318080 IQGAP2Q13576 1575 aa22.77■■□□□ 1.24
CRAT-201ENST00000318080 ATP1B4Q9UN42 357 aaPredicted RBP22.76■■□□□ 1.23
CRAT-201ENST00000318080 MSH5O43196 834 aa22.74■■□□□ 1.23
CRAT-201ENST00000318080 CHD1O14646 1710 aa22.74■■□□□ 1.23
CRAT-201ENST00000318080 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
CRAT-201ENST00000318080 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
CRAT-201ENST00000318080 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
CRAT-201ENST00000318080 LRRC9Q6ZRR7 1453 aa22.7■■□□□ 1.22
CRAT-201ENST00000318080 NUP160Q12769 1436 aa22.7■■□□□ 1.22
CRAT-201ENST00000318080 SAMD9Q5K651 1589 aa22.68■■□□□ 1.22
CRAT-201ENST00000318080 EFCAB5A4FU69 1503 aa22.66■■□□□ 1.22
CRAT-201ENST00000318080 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
CRAT-201ENST00000318080 ARID3CA6NKF2 412 aa22.64■■□□□ 1.22
CRAT-201ENST00000318080 PCF11O94913 1555 aaKnown RBP22.64■■□□□ 1.21
CRAT-201ENST00000318080 ERICH6Q7L0X2 663 aa22.63■■□□□ 1.21
CRAT-201ENST00000318080 DISP1Q96F81 1524 aa22.63■■□□□ 1.21
CRAT-201ENST00000318080 IRX6P78412 446 aaPredicted RBP22.63■■□□□ 1.21
CRAT-201ENST00000318080 NEFLP07196 543 aa22.61■■□□□ 1.21
CRAT-201ENST00000318080 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
CRAT-201ENST00000318080 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
CRAT-201ENST00000318080 KIAA0556O60303 1618 aa22.55■■□□□ 1.2
CRAT-201ENST00000318080 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
CRAT-201ENST00000318080 ANP32CO43423 234 aa22.51■■□□□ 1.19
CRAT-201ENST00000318080 CASKIN1Q8WXD9 1431 aa22.5■■□□□ 1.19
CRAT-201ENST00000318080 PRG4Q92954 1404 aaPredicted RBP22.5■■□□□ 1.19
CRAT-201ENST00000318080 ERCC6L2Q5T890 1561 aa22.49■■□□□ 1.19
CRAT-201ENST00000318080 LRRIQ1Q96JM4 1722 aa22.47■■□□□ 1.19
CRAT-201ENST00000318080 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
CRAT-201ENST00000318080 CCER2I3L3R5 266 aa22.46■■□□□ 1.19
CRAT-201ENST00000318080 TIMELESSQ9UNS1 1208 aa22.45■■□□□ 1.19
CRAT-201ENST00000318080 PLB1Q6P1J6 1458 aa22.43■■□□□ 1.18
CRAT-201ENST00000318080 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
CRAT-201ENST00000318080 CARMIL2Q6F5E8 1435 aa22.42■■□□□ 1.18
CRAT-201ENST00000318080 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
CRAT-201ENST00000318080 CDK13Q14004 1512 aaKnown RBP22.4■■□□□ 1.18
CRAT-201ENST00000318080 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
CRAT-201ENST00000318080 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
CRAT-201ENST00000318080 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
CRAT-201ENST00000318080 FGD6Q6ZV73 1430 aa22.34■■□□□ 1.17
CRAT-201ENST00000318080 NUP153P49790 1475 aaKnown RBP22.34■■□□□ 1.17
CRAT-201ENST00000318080 MAGI3Q5TCQ9 1506 aa22.33■■□□□ 1.17
CRAT-201ENST00000318080 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
CRAT-201ENST00000318080 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.16
CRAT-201ENST00000318080 EPRSP07814 1512 aaKnown RBP22.32■■□□□ 1.16
CRAT-201ENST00000318080 PTPRGP23470 1445 aa22.31■■□□□ 1.16
CRAT-201ENST00000318080 RAPGEF6Q8TEU7 1601 aa22.3■■□□□ 1.16
CRAT-201ENST00000318080 HNRNPUQ00839 825 aaKnown RBP eCLIP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms