RNA–Protein interactions for RNA: ENST00000316824.3

ALX1-201, Transcript of ALX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX1-201ENST00000316824 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
ALX1-201ENST00000316824 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
ALX1-201ENST00000316824 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
ALX1-201ENST00000316824 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
ALX1-201ENST00000316824 CTTNBP2Q8WZ74 1663 aa21.03■□□□□ 0.96
ALX1-201ENST00000316824 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
ALX1-201ENST00000316824 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
ALX1-201ENST00000316824 CLIP1P30622 1438 aa20.94■□□□□ 0.94
ALX1-201ENST00000316824 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
ALX1-201ENST00000316824 IQGAP2Q13576 1575 aa20.86■□□□□ 0.93
ALX1-201ENST00000316824 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
ALX1-201ENST00000316824 NUP160Q12769 1436 aa20.83■□□□□ 0.93
ALX1-201ENST00000316824 CHD1O14646 1710 aa20.83■□□□□ 0.92
ALX1-201ENST00000316824 KIAA0586Q9BVV6 1533 aa20.82■□□□□ 0.92
ALX1-201ENST00000316824 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
ALX1-201ENST00000316824 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
ALX1-201ENST00000316824 SAMD9Q5K651 1589 aa20.78■□□□□ 0.92
ALX1-201ENST00000316824 ARAP1Q96P48 1450 aa20.77■□□□□ 0.91
ALX1-201ENST00000316824 UGGT2Q9NYU1 1516 aa20.76■□□□□ 0.91
ALX1-201ENST00000316824 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
ALX1-201ENST00000316824 FBLN2P98095 1184 aa20.76■□□□□ 0.91
ALX1-201ENST00000316824 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
ALX1-201ENST00000316824 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
ALX1-201ENST00000316824 FHOD3Q2V2M9 1422 aa20.63■□□□□ 0.89
ALX1-201ENST00000316824 FMN1Q68DA7 1419 aa20.62■□□□□ 0.89
ALX1-201ENST00000316824 CLASP1Q7Z460 1538 aa20.62■□□□□ 0.89
ALX1-201ENST00000316824 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
ALX1-201ENST00000316824 DISP1Q96F81 1524 aa20.6■□□□□ 0.89
ALX1-201ENST00000316824 CARMIL2Q6F5E8 1435 aa20.58■□□□□ 0.89
ALX1-201ENST00000316824 FYCO1Q9BQS8 1478 aa20.57■□□□□ 0.88
ALX1-201ENST00000316824 PCF11O94913 1555 aaKnown RBP20.56■□□□□ 0.88
ALX1-201ENST00000316824 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
ALX1-201ENST00000316824 JPH4Q96JJ6 628 aa20.54■□□□□ 0.88
ALX1-201ENST00000316824 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
ALX1-201ENST00000316824 P3H3Q8IVL6 736 aa20.52■□□□□ 0.87
ALX1-201ENST00000316824 MAP3K1Q13233 1512 aa20.5■□□□□ 0.87
ALX1-201ENST00000316824 APLP2Q06481 763 aa20.49■□□□□ 0.87
ALX1-201ENST00000316824 PRG4Q92954 1404 aaPredicted RBP20.49■□□□□ 0.87
ALX1-201ENST00000316824 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
ALX1-201ENST00000316824 HECW1Q76N89 1606 aa20.47■□□□□ 0.87
ALX1-201ENST00000316824 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
ALX1-201ENST00000316824 CCDC18Q5T9S5 1454 aa20.42■□□□□ 0.86
ALX1-201ENST00000316824 RAPGEF6Q8TEU7 1601 aa20.41■□□□□ 0.86
ALX1-201ENST00000316824 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
ALX1-201ENST00000316824 LRRIQ1Q96JM4 1722 aa20.35■□□□□ 0.85
ALX1-201ENST00000316824 ABCA8O94911 1581 aa20.35■□□□□ 0.85
ALX1-201ENST00000316824 PTPRGP23470 1445 aa20.33■□□□□ 0.85
ALX1-201ENST00000316824 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.85
ALX1-201ENST00000316824 LRRC9Q6ZRR7 1453 aa20.32■□□□□ 0.84
ALX1-201ENST00000316824 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
ALX1-201ENST00000316824 NUP153P49790 1475 aaKnown RBP20.31■□□□□ 0.84
ALX1-201ENST00000316824 PLB1Q6P1J6 1458 aa20.31■□□□□ 0.84
ALX1-201ENST00000316824 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
ALX1-201ENST00000316824 EHBP1L1Q8N3D4 1523 aa20.27■□□□□ 0.84
ALX1-201ENST00000316824 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
ALX1-201ENST00000316824 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
ALX1-201ENST00000316824 UACAQ9BZF9 1416 aa20.25■□□□□ 0.83
ALX1-201ENST00000316824 CDK13Q14004 1512 aaKnown RBP20.24■□□□□ 0.83
ALX1-201ENST00000316824 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
ALX1-201ENST00000316824 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
ALX1-201ENST00000316824 KANK4Q5T7N3 995 aaPredicted RBP20.22■□□□□ 0.83
ALX1-201ENST00000316824 UHRF1BP1LA0JNW5 1464 aa20.22■□□□□ 0.83
ALX1-201ENST00000316824 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
ALX1-201ENST00000316824 SUPT6HQ7KZ85 1726 aaKnown RBP20.19■□□□□ 0.82
ALX1-201ENST00000316824 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
ALX1-201ENST00000316824 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
ALX1-201ENST00000316824 MAGI3Q5TCQ9 1506 aa20.16■□□□□ 0.82
ALX1-201ENST00000316824 CDK11AQ9UQ88 783 aaPredicted RBP20.16■□□□□ 0.82
ALX1-201ENST00000316824 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
ALX1-201ENST00000316824 ATP10BO94823 1461 aa20.13■□□□□ 0.81
ALX1-201ENST00000316824 ADCY10Q96PN6 1610 aa20.12■□□□□ 0.81
ALX1-201ENST00000316824 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
ALX1-201ENST00000316824 NCOA2Q15596 1464 aa20.1■□□□□ 0.81
ALX1-201ENST00000316824 KDM5BQ9UGL1 1544 aa20.1■□□□□ 0.81
ALX1-201ENST00000316824 RRBP1Q9P2E9 1410 aaKnown RBP20.09■□□□□ 0.81
ALX1-201ENST00000316824 PCGF6Q9BYE7 350 aa20.09■□□□□ 0.81
ALX1-201ENST00000316824 ZCCHC11Q5TAX3 1644 aaKnown RBP20.08■□□□□ 0.81
ALX1-201ENST00000316824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.8
ALX1-201ENST00000316824 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.8
ALX1-201ENST00000316824 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.8
ALX1-201ENST00000316824 KIF14Q15058 1648 aa20.07■□□□□ 0.8
ALX1-201ENST00000316824 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
ALX1-201ENST00000316824 RIMBP3CA6NJZ7 1639 aa20.06■□□□□ 0.8
ALX1-201ENST00000316824 RIMBP3BA6NNM3 1639 aa20.06■□□□□ 0.8
ALX1-201ENST00000316824 RIMBP3Q9UFD9 1639 aa20.06■□□□□ 0.8
ALX1-201ENST00000316824 PHLDB1Q86UU1 1377 aa20.05■□□□□ 0.8
ALX1-201ENST00000316824 MYOM3Q5VTT5 1437 aa20.02■□□□□ 0.8
ALX1-201ENST00000316824 CCNB3Q8WWL7 1395 aa20.02■□□□□ 0.8
ALX1-201ENST00000316824 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.79
ALX1-201ENST00000316824 ITSN2Q9NZM3 1697 aa20.01■□□□□ 0.79
ALX1-201ENST00000316824 FGD6Q6ZV73 1430 aa19.99■□□□□ 0.79
ALX1-201ENST00000316824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
ALX1-201ENST00000316824 MIA2Q96PC5 1412 aa19.96■□□□□ 0.79
ALX1-201ENST00000316824 ABCC10Q5T3U5 1492 aa19.94■□□□□ 0.78
ALX1-201ENST00000316824 WDR7Q9Y4E6 1490 aa19.93■□□□□ 0.78
ALX1-201ENST00000316824 PTPN23Q9H3S7 1636 aa19.92■□□□□ 0.78
ALX1-201ENST00000316824 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
ALX1-201ENST00000316824 CDC42BPAQ5VT25 1732 aa19.89■□□□□ 0.78
ALX1-201ENST00000316824 NPM1P06748 294 aaKnown RBP eCLIP19.89■□□□□ 0.77
ALX1-201ENST00000316824 PREX2Q70Z35 1606 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms