RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
TFE3-201ENST00000315869 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
TFE3-201ENST00000315869 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
TFE3-201ENST00000315869 ARHGAP35Q9NRY4 1499 aa21.57■■□□□ 1.04
TFE3-201ENST00000315869 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
TFE3-201ENST00000315869 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.047e-7■■■■■ 32.6
TFE3-201ENST00000315869 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
TFE3-201ENST00000315869 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
TFE3-201ENST00000315869 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
TFE3-201ENST00000315869 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
TFE3-201ENST00000315869 FBLN2P98095 1184 aa21.46■■□□□ 1.03
TFE3-201ENST00000315869 GAPVD1Q14C86 1478 aa21.46■■□□□ 1.03
TFE3-201ENST00000315869 ERCC6Q03468 1493 aa21.45■■□□□ 1.02
TFE3-201ENST00000315869 MYT1Q01538 1121 aa21.41■■□□□ 1.02
TFE3-201ENST00000315869 BCANQ96GW7 911 aa21.4■■□□□ 1.02
TFE3-201ENST00000315869 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.01
TFE3-201ENST00000315869 ZNF608Q9ULD9 1512 aaPredicted RBP21.38■■□□□ 1.01
TFE3-201ENST00000315869 CCNB3Q8WWL7 1395 aa21.35■■□□□ 1.01
TFE3-201ENST00000315869 SUPT16HQ9Y5B9 1047 aaKnown RBP21.35■■□□□ 1.01
TFE3-201ENST00000315869 KCNH8Q96L42 1107 aa21.35■■□□□ 1.01
TFE3-201ENST00000315869 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
TFE3-201ENST00000315869 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
TFE3-201ENST00000315869 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
TFE3-201ENST00000315869 SIN3AQ96ST3 1273 aa21.31■■□□□ 1
TFE3-201ENST00000315869 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
TFE3-201ENST00000315869 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
TFE3-201ENST00000315869 ABCA5Q8WWZ7 1642 aa21.23■□□□□ 0.99
TFE3-201ENST00000315869 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
TFE3-201ENST00000315869 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
TFE3-201ENST00000315869 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
TFE3-201ENST00000315869 CUL7Q14999 1698 aa21.18■□□□□ 0.98
TFE3-201ENST00000315869 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
TFE3-201ENST00000315869 RRBP1Q9P2E9 1410 aaKnown RBP21.17■□□□□ 0.98
TFE3-201ENST00000315869 FKBP8Q14318 412 aa21.16■□□□□ 0.98
TFE3-201ENST00000315869 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
TFE3-201ENST00000315869 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
TFE3-201ENST00000315869 NEFLP07196 543 aa21.13■□□□□ 0.97
TFE3-201ENST00000315869 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
TFE3-201ENST00000315869 SNAPC4Q5SXM2 1469 aa21.12■□□□□ 0.97
TFE3-201ENST00000315869 TIAM1Q13009 1591 aa21.11■□□□□ 0.97
TFE3-201ENST00000315869 LRRC9Q6ZRR7 1453 aa21.11■□□□□ 0.97
TFE3-201ENST00000315869 MTUS2Q5JR59 1369 aa21.1■□□□□ 0.97
TFE3-201ENST00000315869 IFT140Q96RY7 1462 aa21.09■□□□□ 0.97
TFE3-201ENST00000315869 SETD5Q9C0A6 1442 aa21.08■□□□□ 0.97
TFE3-201ENST00000315869 CTTNBP2Q8WZ74 1663 aa21.08■□□□□ 0.96
TFE3-201ENST00000315869 WDR62O43379 1518 aa21.06■□□□□ 0.96
TFE3-201ENST00000315869 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
TFE3-201ENST00000315869 ANP32CO43423 234 aa21.06■□□□□ 0.96
TFE3-201ENST00000315869 TSHZ2Q9NRE2 1034 aa21.06■□□□□ 0.96
TFE3-201ENST00000315869 FMN1Q68DA7 1419 aa21.03■□□□□ 0.96
TFE3-201ENST00000315869 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
TFE3-201ENST00000315869 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
TFE3-201ENST00000315869 ADAMTS12P58397 1594 aa21■□□□□ 0.95
TFE3-201ENST00000315869 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
TFE3-201ENST00000315869 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
TFE3-201ENST00000315869 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
TFE3-201ENST00000315869 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
TFE3-201ENST00000315869 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
TFE3-201ENST00000315869 IQGAP2Q13576 1575 aa20.94■□□□□ 0.94
TFE3-201ENST00000315869 CDK13Q14004 1512 aaKnown RBP20.92■□□□□ 0.94
TFE3-201ENST00000315869 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
TFE3-201ENST00000315869 GRIN2AQ12879 1464 aa20.91■□□□□ 0.94
TFE3-201ENST00000315869 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
TFE3-201ENST00000315869 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
TFE3-201ENST00000315869 MAPKBP1O60336 1514 aa20.89■□□□□ 0.93
TFE3-201ENST00000315869 SAMD9Q5K651 1589 aa20.88■□□□□ 0.93
TFE3-201ENST00000315869 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
TFE3-201ENST00000315869 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
TFE3-201ENST00000315869 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
TFE3-201ENST00000315869 CFAP43Q8NDM7 1665 aa20.84■□□□□ 0.93
TFE3-201ENST00000315869 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
TFE3-201ENST00000315869 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.93
TFE3-201ENST00000315869 LRRIQ1Q96JM4 1722 aa20.83■□□□□ 0.92
TFE3-201ENST00000315869 MAP3K1Q13233 1512 aa20.82■□□□□ 0.92
TFE3-201ENST00000315869 MAGI3Q5TCQ9 1506 aa20.82■□□□□ 0.92
TFE3-201ENST00000315869 KIAA0586Q9BVV6 1533 aa20.82■□□□□ 0.92
TFE3-201ENST00000315869 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
TFE3-201ENST00000315869 FGD6Q6ZV73 1430 aa20.81■□□□□ 0.92
TFE3-201ENST00000315869 DISP1Q96F81 1524 aa20.79■□□□□ 0.92
TFE3-201ENST00000315869 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
TFE3-201ENST00000315869 ANP32EQ9BTT0 268 aa20.78■□□□□ 0.92
TFE3-201ENST00000315869 PLB1Q6P1J6 1458 aa20.78■□□□□ 0.92
TFE3-201ENST00000315869 PTPRKQ15262 1439 aa20.78■□□□□ 0.92
TFE3-201ENST00000315869 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
TFE3-201ENST00000315869 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
TFE3-201ENST00000315869 TIMELESSQ9UNS1 1208 aa20.77■□□□□ 0.92
TFE3-201ENST00000315869 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
TFE3-201ENST00000315869 CCER2I3L3R5 266 aa20.74■□□□□ 0.91
TFE3-201ENST00000315869 MYOM3Q5VTT5 1437 aa20.72■□□□□ 0.91
TFE3-201ENST00000315869 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
TFE3-201ENST00000315869 UGGT2Q9NYU1 1516 aa20.7■□□□□ 0.9
TFE3-201ENST00000315869 POLR3GLQ9BT43 218 aa20.7■□□□□ 0.9
TFE3-201ENST00000315869 RBM19Q9Y4C8 960 aaKnown RBP20.7■□□□□ 0.9
TFE3-201ENST00000315869 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
TFE3-201ENST00000315869 FOXD1Q16676 465 aa20.68■□□□□ 0.9
TFE3-201ENST00000315869 NUP153P49790 1475 aaKnown RBP20.67■□□□□ 0.9
TFE3-201ENST00000315869 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
TFE3-201ENST00000315869 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
TFE3-201ENST00000315869 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
TFE3-201ENST00000315869 CCDC18Q5T9S5 1454 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms