RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
CDC42-201ENST00000315554 FBLN2P98095 1184 aa13.33□□□□□ -0.28
CDC42-201ENST00000315554 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
CDC42-201ENST00000315554 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
CDC42-201ENST00000315554 KIF27Q86VH2 1401 aa13.27□□□□□ -0.28
CDC42-201ENST00000315554 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
CDC42-201ENST00000315554 CHD1O14646 1710 aa13.26□□□□□ -0.29
CDC42-201ENST00000315554 MAGI1Q96QZ7 1491 aaPredicted RBP13.26□□□□□ -0.29
CDC42-201ENST00000315554 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
CDC42-201ENST00000315554 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
CDC42-201ENST00000315554 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
CDC42-201ENST00000315554 DNAJC5Q9H3Z4 198 aa13.23□□□□□ -0.29
CDC42-201ENST00000315554 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
CDC42-201ENST00000315554 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
CDC42-201ENST00000315554 IGF1RP08069 1367 aa13.23□□□□□ -0.29
CDC42-201ENST00000315554 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
CDC42-201ENST00000315554 FAM9AQ8IZU1 332 aaPredicted RBP13.18□□□□□ -0.3
CDC42-201ENST00000315554 GRIN2AQ12879 1464 aa13.17□□□□□ -0.3
CDC42-201ENST00000315554 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
CDC42-201ENST00000315554 CUL7Q14999 1698 aa13.14□□□□□ -0.31
CDC42-201ENST00000315554 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
CDC42-201ENST00000315554 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
CDC42-201ENST00000315554 NUP160Q12769 1436 aa13.09□□□□□ -0.31
CDC42-201ENST00000315554 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
CDC42-201ENST00000315554 RAPGEF2Q9Y4G8 1499 aa13.08□□□□□ -0.32
CDC42-201ENST00000315554 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
CDC42-201ENST00000315554 EEA1Q15075 1411 aa13.06□□□□□ -0.32
CDC42-201ENST00000315554 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
CDC42-201ENST00000315554 APLP2Q06481 763 aa13.04□□□□□ -0.32
CDC42-201ENST00000315554 ARHGEF11O15085 1522 aa13.04□□□□□ -0.32
CDC42-201ENST00000315554 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
CDC42-201ENST00000315554 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
CDC42-201ENST00000315554 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
CDC42-201ENST00000315554 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
CDC42-201ENST00000315554 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
CDC42-201ENST00000315554 KIAA0586Q9BVV6 1533 aa12.99□□□□□ -0.33
CDC42-201ENST00000315554 JPH4Q96JJ6 628 aa12.99□□□□□ -0.33
CDC42-201ENST00000315554 PRG4Q92954 1404 aaPredicted RBP12.97□□□□□ -0.33
CDC42-201ENST00000315554 SHROOM2Q13796 1616 aa12.97□□□□□ -0.33
CDC42-201ENST00000315554 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
CDC42-201ENST00000315554 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
CDC42-201ENST00000315554 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.34
CDC42-201ENST00000315554 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
CDC42-201ENST00000315554 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
CDC42-201ENST00000315554 ABCB7O75027 752 aa12.95□□□□□ -0.34
CDC42-201ENST00000315554 KIF21BO75037 1637 aa12.94□□□□□ -0.34
CDC42-201ENST00000315554 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
CDC42-201ENST00000315554 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
CDC42-201ENST00000315554 CTTNBP2Q8WZ74 1663 aa12.92□□□□□ -0.34
CDC42-201ENST00000315554 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
CDC42-201ENST00000315554 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
CDC42-201ENST00000315554 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
CDC42-201ENST00000315554 DISP1Q96F81 1524 aa12.87□□□□□ -0.35
CDC42-201ENST00000315554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
CDC42-201ENST00000315554 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
CDC42-201ENST00000315554 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
CDC42-201ENST00000315554 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
CDC42-201ENST00000315554 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
CDC42-201ENST00000315554 CARMIL2Q6F5E8 1435 aa12.85□□□□□ -0.35
CDC42-201ENST00000315554 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
CDC42-201ENST00000315554 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
CDC42-201ENST00000315554 PTPRGP23470 1445 aa12.82□□□□□ -0.36
CDC42-201ENST00000315554 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
CDC42-201ENST00000315554 SAMD9Q5K651 1589 aa12.77□□□□□ -0.37
CDC42-201ENST00000315554 FHOD3Q2V2M9 1422 aa12.77□□□□□ -0.37
CDC42-201ENST00000315554 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
CDC42-201ENST00000315554 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
CDC42-201ENST00000315554 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
CDC42-201ENST00000315554 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
CDC42-201ENST00000315554 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
CDC42-201ENST00000315554 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
CDC42-201ENST00000315554 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
CDC42-201ENST00000315554 EFCAB5A4FU69 1503 aa12.72□□□□□ -0.37
CDC42-201ENST00000315554 CLIP1P30622 1438 aa12.69□□□□□ -0.38
CDC42-201ENST00000315554 ABCC2Q92887 1545 aa12.69□□□□□ -0.38
CDC42-201ENST00000315554 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDC42-201ENST00000315554 ABCA8O94911 1581 aa12.68□□□□□ -0.38
CDC42-201ENST00000315554 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
CDC42-201ENST00000315554 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
CDC42-201ENST00000315554 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
CDC42-201ENST00000315554 RAPGEF6Q8TEU7 1601 aa12.64□□□□□ -0.39
CDC42-201ENST00000315554 ZCCHC11Q5TAX3 1644 aaKnown RBP12.63□□□□□ -0.39
CDC42-201ENST00000315554 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
CDC42-201ENST00000315554 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
CDC42-201ENST00000315554 FMN1Q68DA7 1419 aa12.61□□□□□ -0.39
CDC42-201ENST00000315554 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
CDC42-201ENST00000315554 ATP10BO94823 1461 aa12.6□□□□□ -0.39
CDC42-201ENST00000315554 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
CDC42-201ENST00000315554 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
CDC42-201ENST00000315554 PCF11O94913 1555 aaKnown RBP12.57□□□□□ -0.4
CDC42-201ENST00000315554 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
CDC42-201ENST00000315554 CDK13Q14004 1512 aaKnown RBP12.57□□□□□ -0.4
CDC42-201ENST00000315554 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
CDC42-201ENST00000315554 ABCC10Q5T3U5 1492 aa12.55□□□□□ -0.4
CDC42-201ENST00000315554 HECW1Q76N89 1606 aa12.55□□□□□ -0.4
CDC42-201ENST00000315554 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
CDC42-201ENST00000315554 WDR7Q9Y4E6 1490 aa12.54□□□□□ -0.4
CDC42-201ENST00000315554 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
CDC42-201ENST00000315554 EPRSP07814 1512 aaKnown RBP12.53□□□□□ -0.4
CDC42-201ENST00000315554 KIF13AQ9H1H9 1805 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms