RNA–Protein interactions for RNA: ENST00000314235.9

KCNMB3-201, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best) BASIC

Gene KCNMB3, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-201ENST00000314235 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
KCNMB3-201ENST00000314235 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
KCNMB3-201ENST00000314235 HMGXB3Q12766 1538 aa17.71■□□□□ 0.43
KCNMB3-201ENST00000314235 GABBR2O75899 941 aa17.7■□□□□ 0.42
KCNMB3-201ENST00000314235 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
KCNMB3-201ENST00000314235 FARP1Q9Y4F1 1045 aaPredicted RBP17.59■□□□□ 0.41
KCNMB3-201ENST00000314235 CD44P16070 742 aaKnown RBP17.52■□□□□ 0.4
KCNMB3-201ENST00000314235 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
KCNMB3-201ENST00000314235 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
KCNMB3-201ENST00000314235 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
KCNMB3-201ENST00000314235 CLCN6P51797 869 aa17.38■□□□□ 0.37
KCNMB3-201ENST00000314235 LHX8Q68G74 356 aa17.37■□□□□ 0.37
KCNMB3-201ENST00000314235 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
KCNMB3-201ENST00000314235 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
KCNMB3-201ENST00000314235 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
KCNMB3-201ENST00000314235 CFTRP13569 1480 aa17.32■□□□□ 0.36
KCNMB3-201ENST00000314235 ZNF579Q8NAF0 562 aaKnown RBP17.3■□□□□ 0.36
KCNMB3-201ENST00000314235 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
KCNMB3-201ENST00000314235 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
KCNMB3-201ENST00000314235 NESP48681 1621 aa17.2■□□□□ 0.34
KCNMB3-201ENST00000314235 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
KCNMB3-201ENST00000314235 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
KCNMB3-201ENST00000314235 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
KCNMB3-201ENST00000314235 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
KCNMB3-201ENST00000314235 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
KCNMB3-201ENST00000314235 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
KCNMB3-201ENST00000314235 MNX1P50219 401 aaPredicted RBP17.1■□□□□ 0.33
KCNMB3-201ENST00000314235 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
KCNMB3-201ENST00000314235 GALR2O43603 387 aaPredicted RBP17.06■□□□□ 0.32
KCNMB3-201ENST00000314235 PROM2Q8N271 834 aa17.03■□□□□ 0.32
KCNMB3-201ENST00000314235 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.32
KCNMB3-201ENST00000314235 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
KCNMB3-201ENST00000314235 PAK3O75914 559 aaPredicted RBP17■□□□□ 0.31
KCNMB3-201ENST00000314235 PHF12Q96QT6 1004 aa16.98■□□□□ 0.31
KCNMB3-201ENST00000314235 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
KCNMB3-201ENST00000314235 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.3
KCNMB3-201ENST00000314235 TOP2BQ02880 1626 aa16.96■□□□□ 0.3
KCNMB3-201ENST00000314235 CUX1P39880 1505 aa16.95■□□□□ 0.3
KCNMB3-201ENST00000314235 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
KCNMB3-201ENST00000314235 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
KCNMB3-201ENST00000314235 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
KCNMB3-201ENST00000314235 URB2Q14146 1524 aaKnown RBP16.89■□□□□ 0.29
KCNMB3-201ENST00000314235 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
KCNMB3-201ENST00000314235 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
KCNMB3-201ENST00000314235 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
KCNMB3-201ENST00000314235 FAM9AQ8IZU1 332 aaPredicted RBP16.8■□□□□ 0.28
KCNMB3-201ENST00000314235 SOGA1O94964 1423 aa16.79■□□□□ 0.28
KCNMB3-201ENST00000314235 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
KCNMB3-201ENST00000314235 POTEB2H3BUK9 544 aa16.78■□□□□ 0.28
KCNMB3-201ENST00000314235 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
KCNMB3-201ENST00000314235 WDR62O43379 1518 aa16.77■□□□□ 0.28
KCNMB3-201ENST00000314235 MS4A3Q96HJ5 214 aa16.76■□□□□ 0.27
KCNMB3-201ENST00000314235 EEA1Q15075 1411 aa16.75■□□□□ 0.27
KCNMB3-201ENST00000314235 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
KCNMB3-201ENST00000314235 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
KCNMB3-201ENST00000314235 ASTLQ6HA08 431 aaPredicted RBP16.73■□□□□ 0.27
KCNMB3-201ENST00000314235 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
KCNMB3-201ENST00000314235 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
KCNMB3-201ENST00000314235 KIF27Q86VH2 1401 aa16.71■□□□□ 0.26
KCNMB3-201ENST00000314235 CUX2O14529 1486 aa16.69■□□□□ 0.26
KCNMB3-201ENST00000314235 CCDC61Q9Y6R9 512 aa16.69■□□□□ 0.26
KCNMB3-201ENST00000314235 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
KCNMB3-201ENST00000314235 ATMINO43313 823 aaPredicted RBP16.67■□□□□ 0.26
KCNMB3-201ENST00000314235 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
KCNMB3-201ENST00000314235 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
KCNMB3-201ENST00000314235 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
KCNMB3-201ENST00000314235 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
KCNMB3-201ENST00000314235 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
KCNMB3-201ENST00000314235 METRNQ9UJH8 293 aa16.61■□□□□ 0.25
KCNMB3-201ENST00000314235 IGF1RP08069 1367 aa16.6■□□□□ 0.25
KCNMB3-201ENST00000314235 SLC39A7Q92504 469 aa16.6■□□□□ 0.25
KCNMB3-201ENST00000314235 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
KCNMB3-201ENST00000314235 C7P10643 843 aa16.59■□□□□ 0.25
KCNMB3-201ENST00000314235 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
KCNMB3-201ENST00000314235 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
KCNMB3-201ENST00000314235 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.24
KCNMB3-201ENST00000314235 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
KCNMB3-201ENST00000314235 MIER1Q8N108 512 aa16.54■□□□□ 0.24
KCNMB3-201ENST00000314235 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
KCNMB3-201ENST00000314235 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.24
KCNMB3-201ENST00000314235 POTEJP0CG39 1038 aa16.52■□□□□ 0.23
KCNMB3-201ENST00000314235 RASEFQ8IZ41 740 aa16.52■□□□□ 0.23
KCNMB3-201ENST00000314235 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
KCNMB3-201ENST00000314235 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
KCNMB3-201ENST00000314235 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
KCNMB3-201ENST00000314235 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
KCNMB3-201ENST00000314235 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
KCNMB3-201ENST00000314235 KIF21BO75037 1637 aa16.48■□□□□ 0.23
KCNMB3-201ENST00000314235 GOLGA3Q08378 1498 aa16.48■□□□□ 0.23
KCNMB3-201ENST00000314235 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
KCNMB3-201ENST00000314235 MAP3K13O43283 966 aa16.46■□□□□ 0.23
KCNMB3-201ENST00000314235 BMP2KQ9NSY1 1161 aaPredicted RBP16.46■□□□□ 0.23
KCNMB3-201ENST00000314235 TRPC6Q9Y210 931 aa16.45■□□□□ 0.22
KCNMB3-201ENST00000314235 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
KCNMB3-201ENST00000314235 EIF4G3O43432 1585 aaKnown RBP16.44■□□□□ 0.22
KCNMB3-201ENST00000314235 CUL7Q14999 1698 aa16.42■□□□□ 0.22
KCNMB3-201ENST00000314235 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
KCNMB3-201ENST00000314235 TIE1P35590 1138 aa16.42■□□□□ 0.22
KCNMB3-201ENST00000314235 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
KCNMB3-201ENST00000314235 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms