RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
CDK5R1-201ENST00000313401 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
CDK5R1-201ENST00000313401 SENP3-EIF4A1A0A087X0R7 540 aa25.58■■□□□ 1.69
CDK5R1-201ENST00000313401 KIF21BO75037 1637 aa25.47■■□□□ 1.67
CDK5R1-201ENST00000313401 MYT1LQ9UL68 1186 aa25.46■■□□□ 1.67
CDK5R1-201ENST00000313401 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.67
CDK5R1-201ENST00000313401 SETD5Q9C0A6 1442 aa25.44■■□□□ 1.66
CDK5R1-201ENST00000313401 FHOD3Q2V2M9 1422 aa25.36■■□□□ 1.65
CDK5R1-201ENST00000313401 MRS2Q9HD23 443 aa25.35■■□□□ 1.65
CDK5R1-201ENST00000313401 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CDK5R1-201ENST00000313401 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
CDK5R1-201ENST00000313401 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
CDK5R1-201ENST00000313401 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
CDK5R1-201ENST00000313401 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.64
CDK5R1-201ENST00000313401 EIF4G2P78344 907 aaKnown RBP eCLIP25.32■■□□□ 1.64
CDK5R1-201ENST00000313401 SLC4A1APQ9BWU0 796 aaKnown RBP25.3■■□□□ 1.64
CDK5R1-201ENST00000313401 IGF1RP08069 1367 aa25.28■■□□□ 1.64
CDK5R1-201ENST00000313401 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
CDK5R1-201ENST00000313401 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
CDK5R1-201ENST00000313401 PPP1R15AO75807 674 aaPredicted RBP25.26■■□□□ 1.63
CDK5R1-201ENST00000313401 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
CDK5R1-201ENST00000313401 BICRAQ9NZM4 1560 aa25.21■■□□□ 1.63
CDK5R1-201ENST00000313401 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
CDK5R1-201ENST00000313401 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
CDK5R1-201ENST00000313401 TSHZ2Q9NRE2 1034 aa25.16■■□□□ 1.62
CDK5R1-201ENST00000313401 PRXQ9BXM0 1461 aa25.14■■□□□ 1.62
CDK5R1-201ENST00000313401 HSPA5P11021 654 aaKnown RBP25.13■■□□□ 1.61
CDK5R1-201ENST00000313401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.12■■□□□ 1.61
CDK5R1-201ENST00000313401 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
CDK5R1-201ENST00000313401 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
CDK5R1-201ENST00000313401 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
CDK5R1-201ENST00000313401 TMC1Q8TDI8 760 aa25.08■■□□□ 1.61
CDK5R1-201ENST00000313401 CUX1P39880 1505 aa25.07■■□□□ 1.6
CDK5R1-201ENST00000313401 TIMELESSQ9UNS1 1208 aa25.07■■□□□ 1.6
CDK5R1-201ENST00000313401 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 CFDP1Q9UEE9 299 aaPredicted RBP25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 NPM2Q86SE8 214 aaKnown RBP25.04■■□□□ 1.6
CDK5R1-201ENST00000313401 CCER2I3L3R5 266 aa25.01■■□□□ 1.59
CDK5R1-201ENST00000313401 RGL3Q3MIN7 710 aa25■■□□□ 1.59
CDK5R1-201ENST00000313401 RRBP1Q9P2E9 1410 aaKnown RBP25■■□□□ 1.59
CDK5R1-201ENST00000313401 ANP32EQ9BTT0 268 aa25■■□□□ 1.59
CDK5R1-201ENST00000313401 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
CDK5R1-201ENST00000313401 B4GALNT3Q6L9W6 998 aa24.99■■□□□ 1.59
CDK5R1-201ENST00000313401 TSPY4P0CV99 314 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 TSPY10P0CW01 314 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 MPHOSPH9Q99550 1183 aa24.97■■□□□ 1.59
CDK5R1-201ENST00000313401 RBM19Q9Y4C8 960 aaKnown RBP24.96■■□□□ 1.59
CDK5R1-201ENST00000313401 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
CDK5R1-201ENST00000313401 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
CDK5R1-201ENST00000313401 CFTRP13569 1480 aa24.95■■□□□ 1.58
CDK5R1-201ENST00000313401 DAXXQ9UER7 740 aaPredicted RBP24.95■■□□□ 1.58
CDK5R1-201ENST00000313401 LRRC9Q6ZRR7 1453 aa24.94■■□□□ 1.58
CDK5R1-201ENST00000313401 RTL5Q5HYW3 569 aaPredicted RBP24.93■■□□□ 1.58
CDK5R1-201ENST00000313401 NBR1Q14596 966 aa24.9■■□□□ 1.58
CDK5R1-201ENST00000313401 PLEKHD1A6NEE1 506 aa24.86■■□□□ 1.57
CDK5R1-201ENST00000313401 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
CDK5R1-201ENST00000313401 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
CDK5R1-201ENST00000313401 ANP32AP39687 249 aaKnown RBP24.82■■□□□ 1.56
CDK5R1-201ENST00000313401 NESP48681 1621 aa24.8■■□□□ 1.56
CDK5R1-201ENST00000313401 PKD2Q13563 968 aa24.79■■□□□ 1.56
CDK5R1-201ENST00000313401 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
CDK5R1-201ENST00000313401 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
CDK5R1-201ENST00000313401 ZNF644Q9H582 1327 aaPredicted RBP24.76■■□□□ 1.55
CDK5R1-201ENST00000313401 PPP4R2Q9NY27 417 aa24.76■■□□□ 1.55
CDK5R1-201ENST00000313401 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
CDK5R1-201ENST00000313401 DCAF11Q8TEB1 546 aa24.75■■□□□ 1.55
CDK5R1-201ENST00000313401 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
CDK5R1-201ENST00000313401 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
CDK5R1-201ENST00000313401 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.55
CDK5R1-201ENST00000313401 TIAM1Q13009 1591 aa24.69■■□□□ 1.54
CDK5R1-201ENST00000313401 CHGAP10645 457 aaKnown RBP24.68■■□□□ 1.54
CDK5R1-201ENST00000313401 HMGXB3Q12766 1538 aa24.64■■□□□ 1.54
CDK5R1-201ENST00000313401 WASHC2AQ641Q2 1341 aa24.64■■□□□ 1.54
CDK5R1-201ENST00000313401 CC2D1BQ5T0F9 858 aaKnown RBP24.64■■□□□ 1.53
CDK5R1-201ENST00000313401 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
CDK5R1-201ENST00000313401 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
CDK5R1-201ENST00000313401 PRKRIP1Q9H875 184 aaPredicted RBP24.63■■□□□ 1.53
CDK5R1-201ENST00000313401 CCDC184Q52MB2 194 aa24.61■■□□□ 1.53
CDK5R1-201ENST00000313401 MYOM3Q5VTT5 1437 aa24.6■■□□□ 1.53
CDK5R1-201ENST00000313401 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
CDK5R1-201ENST00000313401 NCOA2Q15596 1464 aa24.6■■□□□ 1.53
CDK5R1-201ENST00000313401 ZBTB47Q9UFB7 747 aaPredicted RBP24.59■■□□□ 1.53
CDK5R1-201ENST00000313401 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
CDK5R1-201ENST00000313401 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
CDK5R1-201ENST00000313401 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.52
CDK5R1-201ENST00000313401 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
CDK5R1-201ENST00000313401 NUP155O75694 1391 aa24.56■■□□□ 1.52
CDK5R1-201ENST00000313401 HNRNPMP52272 730 aaKnown RBP eCLIP24.55■■□□□ 1.52
CDK5R1-201ENST00000313401 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
CDK5R1-201ENST00000313401 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 WDR43Q15061 677 aaKnown RBP eCLIP24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 NBPF8Q3BBV2 869 aa24.49■■□□□ 1.51
CDK5R1-201ENST00000313401 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms