RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
CDK5R1-201ENST00000313401 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
CDK5R1-201ENST00000313401 SENP3-EIF4A1A0A087X0R7 540 aa25.58■■□□□ 1.69
CDK5R1-201ENST00000313401 KIF21BO75037 1637 aa25.47■■□□□ 1.67
CDK5R1-201ENST00000313401 MYT1LQ9UL68 1186 aa25.46■■□□□ 1.67
CDK5R1-201ENST00000313401 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.67
CDK5R1-201ENST00000313401 SETD5Q9C0A6 1442 aa25.44■■□□□ 1.66
CDK5R1-201ENST00000313401 FHOD3Q2V2M9 1422 aa25.36■■□□□ 1.65
CDK5R1-201ENST00000313401 MRS2Q9HD23 443 aa25.35■■□□□ 1.65
CDK5R1-201ENST00000313401 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CDK5R1-201ENST00000313401 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
CDK5R1-201ENST00000313401 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
CDK5R1-201ENST00000313401 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
CDK5R1-201ENST00000313401 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.64
CDK5R1-201ENST00000313401 EIF4G2P78344 907 aaKnown RBP eCLIP25.32■■□□□ 1.64
CDK5R1-201ENST00000313401 SLC4A1APQ9BWU0 796 aaKnown RBP25.3■■□□□ 1.64
CDK5R1-201ENST00000313401 IGF1RP08069 1367 aa25.28■■□□□ 1.64
CDK5R1-201ENST00000313401 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
CDK5R1-201ENST00000313401 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
CDK5R1-201ENST00000313401 PPP1R15AO75807 674 aaPredicted RBP25.26■■□□□ 1.63
CDK5R1-201ENST00000313401 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
CDK5R1-201ENST00000313401 BICRAQ9NZM4 1560 aa25.21■■□□□ 1.63
CDK5R1-201ENST00000313401 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
CDK5R1-201ENST00000313401 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
CDK5R1-201ENST00000313401 TSHZ2Q9NRE2 1034 aa25.16■■□□□ 1.62
CDK5R1-201ENST00000313401 PRXQ9BXM0 1461 aa25.14■■□□□ 1.62
CDK5R1-201ENST00000313401 HSPA5P11021 654 aaKnown RBP25.13■■□□□ 1.61
CDK5R1-201ENST00000313401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.12■■□□□ 1.61
CDK5R1-201ENST00000313401 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
CDK5R1-201ENST00000313401 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
CDK5R1-201ENST00000313401 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
CDK5R1-201ENST00000313401 TMC1Q8TDI8 760 aa25.08■■□□□ 1.61
CDK5R1-201ENST00000313401 CUX1P39880 1505 aa25.07■■□□□ 1.6
CDK5R1-201ENST00000313401 TIMELESSQ9UNS1 1208 aa25.07■■□□□ 1.6
CDK5R1-201ENST00000313401 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 CFDP1Q9UEE9 299 aaPredicted RBP25.05■■□□□ 1.6
CDK5R1-201ENST00000313401 NPM2Q86SE8 214 aaKnown RBP25.04■■□□□ 1.6
CDK5R1-201ENST00000313401 CCER2I3L3R5 266 aa25.01■■□□□ 1.59
CDK5R1-201ENST00000313401 RGL3Q3MIN7 710 aa25■■□□□ 1.59
CDK5R1-201ENST00000313401 RRBP1Q9P2E9 1410 aaKnown RBP25■■□□□ 1.59
CDK5R1-201ENST00000313401 ANP32EQ9BTT0 268 aa25■■□□□ 1.59
CDK5R1-201ENST00000313401 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
CDK5R1-201ENST00000313401 B4GALNT3Q6L9W6 998 aa24.99■■□□□ 1.59
CDK5R1-201ENST00000313401 TSPY4P0CV99 314 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 TSPY10P0CW01 314 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
CDK5R1-201ENST00000313401 MPHOSPH9Q99550 1183 aa24.97■■□□□ 1.59
CDK5R1-201ENST00000313401 RBM19Q9Y4C8 960 aaKnown RBP24.96■■□□□ 1.59
CDK5R1-201ENST00000313401 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
CDK5R1-201ENST00000313401 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
CDK5R1-201ENST00000313401 CFTRP13569 1480 aa24.95■■□□□ 1.58
CDK5R1-201ENST00000313401 DAXXQ9UER7 740 aaPredicted RBP24.95■■□□□ 1.58
CDK5R1-201ENST00000313401 LRRC9Q6ZRR7 1453 aa24.94■■□□□ 1.58
CDK5R1-201ENST00000313401 RTL5Q5HYW3 569 aaPredicted RBP24.93■■□□□ 1.58
CDK5R1-201ENST00000313401 NBR1Q14596 966 aa24.9■■□□□ 1.58
CDK5R1-201ENST00000313401 PLEKHD1A6NEE1 506 aa24.86■■□□□ 1.57
CDK5R1-201ENST00000313401 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
CDK5R1-201ENST00000313401 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
CDK5R1-201ENST00000313401 ANP32AP39687 249 aaKnown RBP24.82■■□□□ 1.56
CDK5R1-201ENST00000313401 NESP48681 1621 aa24.8■■□□□ 1.56
CDK5R1-201ENST00000313401 PKD2Q13563 968 aa24.79■■□□□ 1.56
CDK5R1-201ENST00000313401 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
CDK5R1-201ENST00000313401 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
CDK5R1-201ENST00000313401 ZNF644Q9H582 1327 aaPredicted RBP24.76■■□□□ 1.55
CDK5R1-201ENST00000313401 PPP4R2Q9NY27 417 aa24.76■■□□□ 1.55
CDK5R1-201ENST00000313401 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
CDK5R1-201ENST00000313401 DCAF11Q8TEB1 546 aa24.75■■□□□ 1.55
CDK5R1-201ENST00000313401 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
CDK5R1-201ENST00000313401 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
CDK5R1-201ENST00000313401 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.55
CDK5R1-201ENST00000313401 TIAM1Q13009 1591 aa24.69■■□□□ 1.54
CDK5R1-201ENST00000313401 CHGAP10645 457 aaKnown RBP24.68■■□□□ 1.54
CDK5R1-201ENST00000313401 HMGXB3Q12766 1538 aa24.64■■□□□ 1.54
CDK5R1-201ENST00000313401 WASHC2AQ641Q2 1341 aa24.64■■□□□ 1.54
CDK5R1-201ENST00000313401 CC2D1BQ5T0F9 858 aaKnown RBP24.64■■□□□ 1.53
CDK5R1-201ENST00000313401 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
CDK5R1-201ENST00000313401 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
CDK5R1-201ENST00000313401 PRKRIP1Q9H875 184 aaPredicted RBP24.63■■□□□ 1.53
CDK5R1-201ENST00000313401 CCDC184Q52MB2 194 aa24.61■■□□□ 1.53
CDK5R1-201ENST00000313401 MYOM3Q5VTT5 1437 aa24.6■■□□□ 1.53
CDK5R1-201ENST00000313401 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
CDK5R1-201ENST00000313401 NCOA2Q15596 1464 aa24.6■■□□□ 1.53
CDK5R1-201ENST00000313401 ZBTB47Q9UFB7 747 aaPredicted RBP24.59■■□□□ 1.53
CDK5R1-201ENST00000313401 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
CDK5R1-201ENST00000313401 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
CDK5R1-201ENST00000313401 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.52
CDK5R1-201ENST00000313401 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
CDK5R1-201ENST00000313401 NUP155O75694 1391 aa24.56■■□□□ 1.52
CDK5R1-201ENST00000313401 HNRNPMP52272 730 aaKnown RBP eCLIP24.55■■□□□ 1.52
CDK5R1-201ENST00000313401 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
CDK5R1-201ENST00000313401 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 WDR43Q15061 677 aaKnown RBP eCLIP24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
CDK5R1-201ENST00000313401 NBPF8Q3BBV2 869 aa24.49■■□□□ 1.51
CDK5R1-201ENST00000313401 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms