RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.47
GFM1-202ENST00000312756 PBRM1Q86U86 1689 aa12.14□□□□□ -0.47
GFM1-202ENST00000312756 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
GFM1-202ENST00000312756 PRXQ9BXM0 1461 aa12.12□□□□□ -0.47
GFM1-202ENST00000312756 KIF21BO75037 1637 aa12.12□□□□□ -0.47
GFM1-202ENST00000312756 CARMIL1Q5VZK9 1371 aa12.1□□□□□ -0.47
GFM1-202ENST00000312756 UBTFP17480 764 aaKnown RBP12.1□□□□□ -0.47
GFM1-202ENST00000312756 GOLGA3Q08378 1498 aa12.09□□□□□ -0.47
GFM1-202ENST00000312756 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
GFM1-202ENST00000312756 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
GFM1-202ENST00000312756 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
GFM1-202ENST00000312756 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
GFM1-202ENST00000312756 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
GFM1-202ENST00000312756 CUL7Q14999 1698 aa12.05□□□□□ -0.48
GFM1-202ENST00000312756 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
GFM1-202ENST00000312756 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
GFM1-202ENST00000312756 FBLN2P98095 1184 aa12□□□□□ -0.49
GFM1-202ENST00000312756 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
GFM1-202ENST00000312756 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
GFM1-202ENST00000312756 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
GFM1-202ENST00000312756 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
GFM1-202ENST00000312756 CHMP7Q8WUX9 453 aaPredicted RBP11.95□□□□□ -0.5
GFM1-202ENST00000312756 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
GFM1-202ENST00000312756 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
GFM1-202ENST00000312756 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
GFM1-202ENST00000312756 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
GFM1-202ENST00000312756 BCANQ96GW7 911 aa11.94□□□□□ -0.5
GFM1-202ENST00000312756 CHD1O14646 1710 aa11.94□□□□□ -0.5
GFM1-202ENST00000312756 CLIP1P30622 1438 aa11.92□□□□□ -0.5
GFM1-202ENST00000312756 CEP170Q5SW79 1584 aa11.91□□□□□ -0.5
GFM1-202ENST00000312756 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
GFM1-202ENST00000312756 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
GFM1-202ENST00000312756 HRCP23327 699 aa11.89□□□□□ -0.51
GFM1-202ENST00000312756 ARHGAP35Q9NRY4 1499 aa11.88□□□□□ -0.51
GFM1-202ENST00000312756 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
GFM1-202ENST00000312756 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
GFM1-202ENST00000312756 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
GFM1-202ENST00000312756 IQGAP2Q13576 1575 aa11.86□□□□□ -0.51
GFM1-202ENST00000312756 NUP160Q12769 1436 aa11.85□□□□□ -0.51
GFM1-202ENST00000312756 FKBP8Q14318 412 aa11.84□□□□□ -0.51
GFM1-202ENST00000312756 PPARGC1BQ86YN6 1023 aaKnown RBP11.84□□□□□ -0.51
GFM1-202ENST00000312756 FHOD3Q2V2M9 1422 aa11.83□□□□□ -0.52
GFM1-202ENST00000312756 KIAA0586Q9BVV6 1533 aa11.83□□□□□ -0.52
GFM1-202ENST00000312756 SAMD9Q5K651 1589 aa11.8□□□□□ -0.52
GFM1-202ENST00000312756 ARXQ96QS3 562 aa11.79□□□□□ -0.52
GFM1-202ENST00000312756 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
GFM1-202ENST00000312756 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
GFM1-202ENST00000312756 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
GFM1-202ENST00000312756 DISP1Q96F81 1524 aa11.78□□□□□ -0.52
GFM1-202ENST00000312756 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.52
GFM1-202ENST00000312756 JPH4Q96JJ6 628 aa11.77□□□□□ -0.52
GFM1-202ENST00000312756 UGGT2Q9NYU1 1516 aa11.77□□□□□ -0.53
GFM1-202ENST00000312756 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.53
GFM1-202ENST00000312756 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
GFM1-202ENST00000312756 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
GFM1-202ENST00000312756 DNAJC5Q9H3Z4 198 aa11.75□□□□□ -0.53
GFM1-202ENST00000312756 TIMELESSQ9UNS1 1208 aa11.75□□□□□ -0.53
GFM1-202ENST00000312756 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
GFM1-202ENST00000312756 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
GFM1-202ENST00000312756 PCF11O94913 1555 aaKnown RBP11.73□□□□□ -0.53
GFM1-202ENST00000312756 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
GFM1-202ENST00000312756 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
GFM1-202ENST00000312756 SHROOM2Q13796 1616 aa11.71□□□□□ -0.53
GFM1-202ENST00000312756 ARID3CA6NKF2 412 aa11.7□□□□□ -0.54
GFM1-202ENST00000312756 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
GFM1-202ENST00000312756 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
GFM1-202ENST00000312756 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
GFM1-202ENST00000312756 RIMBP3CA6NJZ7 1639 aa11.66□□□□□ -0.54
GFM1-202ENST00000312756 RIMBP3BA6NNM3 1639 aa11.66□□□□□ -0.54
GFM1-202ENST00000312756 RIMBP3Q9UFD9 1639 aa11.66□□□□□ -0.54
GFM1-202ENST00000312756 FMN1Q68DA7 1419 aa11.66□□□□□ -0.54
GFM1-202ENST00000312756 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
GFM1-202ENST00000312756 PLB1Q6P1J6 1458 aa11.65□□□□□ -0.54
GFM1-202ENST00000312756 CENPBP07199 599 aaPredicted RBP11.65□□□□□ -0.54
GFM1-202ENST00000312756 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
GFM1-202ENST00000312756 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
GFM1-202ENST00000312756 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
GFM1-202ENST00000312756 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
GFM1-202ENST00000312756 CDK13Q14004 1512 aaKnown RBP11.61□□□□□ -0.55
GFM1-202ENST00000312756 TIAM1Q13009 1591 aa11.61□□□□□ -0.55
GFM1-202ENST00000312756 PTPRGP23470 1445 aa11.61□□□□□ -0.55
GFM1-202ENST00000312756 CFAP43Q8NDM7 1665 aa11.6□□□□□ -0.55
GFM1-202ENST00000312756 NUP153P49790 1475 aaKnown RBP11.59□□□□□ -0.55
GFM1-202ENST00000312756 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
GFM1-202ENST00000312756 CYB5RLQ6IPT4 315 aa11.59□□□□□ -0.55
GFM1-202ENST00000312756 ABCA8O94911 1581 aa11.58□□□□□ -0.56
GFM1-202ENST00000312756 EPRSP07814 1512 aaKnown RBP11.58□□□□□ -0.56
GFM1-202ENST00000312756 MAGI3Q5TCQ9 1506 aa11.57□□□□□ -0.56
GFM1-202ENST00000312756 LRRC9Q6ZRR7 1453 aa11.55□□□□□ -0.56
GFM1-202ENST00000312756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
GFM1-202ENST00000312756 FOXD1Q16676 465 aa11.55□□□□□ -0.56
GFM1-202ENST00000312756 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
GFM1-202ENST00000312756 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
GFM1-202ENST00000312756 VSIG10Q8N0Z9 540 aa11.55□□□□□ -0.56
GFM1-202ENST00000312756 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
GFM1-202ENST00000312756 MAP3K1Q13233 1512 aa11.53□□□□□ -0.56
GFM1-202ENST00000312756 ATP10BO94823 1461 aa11.52□□□□□ -0.56
GFM1-202ENST00000312756 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.57
GFM1-202ENST00000312756 MTUS2Q5JR59 1369 aa11.51□□□□□ -0.57
GFM1-202ENST00000312756 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms