RNA–Protein interactions for RNA: ENST00000310942.8

CBX2-202, Transcript of chromobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX2, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-202ENST00000310942 RAB3GAP2Q9H2M9 1393 aa25.26■■□□□ 1.63
CBX2-202ENST00000310942 KCNH8Q96L42 1107 aa25.22■■□□□ 1.63
CBX2-202ENST00000310942 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.63
CBX2-202ENST00000310942 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
CBX2-202ENST00000310942 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
CBX2-202ENST00000310942 KIF21BO75037 1637 aa25.13■■□□□ 1.61
CBX2-202ENST00000310942 SENP3-EIF4A1A0A087X0R7 540 aa25.12■■□□□ 1.61
CBX2-202ENST00000310942 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
CBX2-202ENST00000310942 FHAD1B1AJZ9 1412 aa25.09■■□□□ 1.61
CBX2-202ENST00000310942 EIF4G2P78344 907 aaKnown RBP eCLIP25.07■■□□□ 1.6
CBX2-202ENST00000310942 SLC4A1APQ9BWU0 796 aaKnown RBP25.01■■□□□ 1.59
CBX2-202ENST00000310942 FHOD3Q2V2M9 1422 aa25■■□□□ 1.59
CBX2-202ENST00000310942 SALL2Q9Y467 1007 aaPredicted RBP25■■□□□ 1.59
CBX2-202ENST00000310942 ARAP1Q96P48 1450 aa24.96■■□□□ 1.59
CBX2-202ENST00000310942 PPP1R15AO75807 674 aaPredicted RBP24.95■■□□□ 1.58
CBX2-202ENST00000310942 KDM2AQ9Y2K7 1162 aa24.95■■□□□ 1.58
CBX2-202ENST00000310942 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
CBX2-202ENST00000310942 ARHGAP35Q9NRY4 1499 aa24.94■■□□□ 1.58
CBX2-202ENST00000310942 FOXD1Q16676 465 aa24.94■■□□□ 1.58
CBX2-202ENST00000310942 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
CBX2-202ENST00000310942 IGF1RP08069 1367 aa24.92■■□□□ 1.58
CBX2-202ENST00000310942 TIMELESSQ9UNS1 1208 aa24.88■■□□□ 1.57
CBX2-202ENST00000310942 TSHZ2Q9NRE2 1034 aa24.86■■□□□ 1.57
CBX2-202ENST00000310942 DAXXQ9UER7 740 aaPredicted RBP24.84■■□□□ 1.57
CBX2-202ENST00000310942 TMC1Q8TDI8 760 aa24.84■■□□□ 1.57
CBX2-202ENST00000310942 RTL5Q5HYW3 569 aaPredicted RBP24.83■■□□□ 1.57
CBX2-202ENST00000310942 HSPA5P11021 654 aaKnown RBP24.82■■□□□ 1.56
CBX2-202ENST00000310942 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
CBX2-202ENST00000310942 PHLDB1Q86UU1 1377 aa24.81■■□□□ 1.56
CBX2-202ENST00000310942 CCER2I3L3R5 266 aa24.8■■□□□ 1.56
CBX2-202ENST00000310942 PRXQ9BXM0 1461 aa24.8■■□□□ 1.56
CBX2-202ENST00000310942 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
CBX2-202ENST00000310942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.79■■□□□ 1.564e-8■■□□□ 14.3
CBX2-202ENST00000310942 ANP32EQ9BTT0 268 aa24.79■■□□□ 1.56
CBX2-202ENST00000310942 NPM2Q86SE8 214 aaKnown RBP24.78■■□□□ 1.56
CBX2-202ENST00000310942 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
CBX2-202ENST00000310942 CCDC136Q96JN2 1154 aa24.76■■□□□ 1.55
CBX2-202ENST00000310942 CFDP1Q9UEE9 299 aaPredicted RBP24.76■■□□□ 1.55
CBX2-202ENST00000310942 TSPY4P0CV99 314 aa24.73■■□□□ 1.55
CBX2-202ENST00000310942 TSPY10P0CW01 314 aa24.73■■□□□ 1.55
CBX2-202ENST00000310942 FGD5Q6ZNL6 1462 aa24.73■■□□□ 1.55
CBX2-202ENST00000310942 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
CBX2-202ENST00000310942 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
CBX2-202ENST00000310942 FMN1Q68DA7 1419 aa24.71■■□□□ 1.55
CBX2-202ENST00000310942 RRBP1Q9P2E9 1410 aaKnown RBP24.7■■□□□ 1.55
CBX2-202ENST00000310942 RBM19Q9Y4C8 960 aaKnown RBP24.7■■□□□ 1.54
CBX2-202ENST00000310942 CUX1P39880 1505 aa24.68■■□□□ 1.54
CBX2-202ENST00000310942 RAD54L2Q9Y4B4 1467 aa24.68■■□□□ 1.54
CBX2-202ENST00000310942 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
CBX2-202ENST00000310942 B4GALNT3Q6L9W6 998 aa24.68■■□□□ 1.54
CBX2-202ENST00000310942 ANP32AP39687 249 aaKnown RBP24.67■■□□□ 1.54
CBX2-202ENST00000310942 RGL3Q3MIN7 710 aa24.66■■□□□ 1.54
CBX2-202ENST00000310942 MPHOSPH9Q99550 1183 aa24.66■■□□□ 1.54
CBX2-202ENST00000310942 FANCD2Q9BXW9 1451 aa24.65■■□□□ 1.54
CBX2-202ENST00000310942 L3MBTL2Q969R5 705 aa24.64■■□□□ 1.54
CBX2-202ENST00000310942 NBR1Q14596 966 aa24.63■■□□□ 1.53
CBX2-202ENST00000310942 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
CBX2-202ENST00000310942 CFTRP13569 1480 aa24.6■■□□□ 1.53
CBX2-202ENST00000310942 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
CBX2-202ENST00000310942 CARD11Q9BXL7 1154 aa24.58■■□□□ 1.53
CBX2-202ENST00000310942 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
CBX2-202ENST00000310942 PPP4R2Q9NY27 417 aa24.56■■□□□ 1.52
CBX2-202ENST00000310942 CCDC18Q5T9S5 1454 aa24.53■■□□□ 1.52
CBX2-202ENST00000310942 PKD2Q13563 968 aa24.48■■□□□ 1.51
CBX2-202ENST00000310942 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
CBX2-202ENST00000310942 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
CBX2-202ENST00000310942 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
CBX2-202ENST00000310942 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
CBX2-202ENST00000310942 ZBTB47Q9UFB7 747 aaPredicted RBP24.41■■□□□ 1.5
CBX2-202ENST00000310942 CANXP27824 592 aaKnown RBP24.4■■□□□ 1.5
CBX2-202ENST00000310942 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
CBX2-202ENST00000310942 CHGAP10645 457 aaKnown RBP24.39■■□□□ 1.5
CBX2-202ENST00000310942 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
CBX2-202ENST00000310942 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
CBX2-202ENST00000310942 NESP48681 1621 aa24.35■■□□□ 1.49
CBX2-202ENST00000310942 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
CBX2-202ENST00000310942 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
CBX2-202ENST00000310942 PRKRIP1Q9H875 184 aaPredicted RBP24.34■■□□□ 1.49
CBX2-202ENST00000310942 CC2D1BQ5T0F9 858 aaKnown RBP24.33■■□□□ 1.49
CBX2-202ENST00000310942 UACAQ9BZF9 1416 aa24.33■■□□□ 1.48
CBX2-202ENST00000310942 MYOM3Q5VTT5 1437 aa24.31■■□□□ 1.48
CBX2-202ENST00000310942 WDR43Q15061 677 aaKnown RBP eCLIP24.31■■□□□ 1.48
CBX2-202ENST00000310942 WASHC2AQ641Q2 1341 aa24.3■■□□□ 1.48
CBX2-202ENST00000310942 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
CBX2-202ENST00000310942 NCOA2Q15596 1464 aa24.28■■□□□ 1.48
CBX2-202ENST00000310942 NUP155O75694 1391 aa24.27■■□□□ 1.48
CBX2-202ENST00000310942 SENP3Q9H4L4 574 aaPredicted RBP24.26■■□□□ 1.47
CBX2-202ENST00000310942 BCL11AQ9H165 835 aa24.25■■□□□ 1.47
CBX2-202ENST00000310942 FYCO1Q9BQS8 1478 aa24.23■■□□□ 1.47
CBX2-202ENST00000310942 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
CBX2-202ENST00000310942 ERCC6Q03468 1493 aa24.21■■□□□ 1.47
CBX2-202ENST00000310942 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
CBX2-202ENST00000310942 CCDC184Q52MB2 194 aa24.2■■□□□ 1.46
CBX2-202ENST00000310942 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
CBX2-202ENST00000310942 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.465e-7■■■■□ 19.9
CBX2-202ENST00000310942 NOP58Q9Y2X3 529 aaKnown RBP24.17■■□□□ 1.46
CBX2-202ENST00000310942 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
CBX2-202ENST00000310942 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
CBX2-202ENST00000310942 ST20-MTHFSA0A0A6YYL1 179 aa24.15■■□□□ 1.46
CBX2-202ENST00000310942 KNSTRNQ9Y448 316 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms