RNA–Protein interactions for RNA: ENST00000303660.8

ZEB2-201, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ZEB2, Length 3,913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-201ENST00000303660 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
ZEB2-201ENST00000303660 ANP32CO43423 234 aa13.03□□□□□ -0.32
ZEB2-201ENST00000303660 KIF21BO75037 1637 aa13.01□□□□□ -0.33
ZEB2-201ENST00000303660 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
ZEB2-201ENST00000303660 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
ZEB2-201ENST00000303660 NESP48681 1621 aa12.99□□□□□ -0.33
ZEB2-201ENST00000303660 MSH5O43196 834 aa12.99□□□□□ -0.33
ZEB2-201ENST00000303660 NBR1Q14596 966 aa12.99□□□□□ -0.33
ZEB2-201ENST00000303660 TRIM52Q96A61 297 aa12.98□□□□□ -0.33
ZEB2-201ENST00000303660 IGF1RP08069 1367 aa12.98□□□□□ -0.33
ZEB2-201ENST00000303660 ANO8Q9HCE9 1232 aaPredicted RBP12.98□□□□□ -0.33
ZEB2-201ENST00000303660 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
ZEB2-201ENST00000303660 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
ZEB2-201ENST00000303660 PRXQ9BXM0 1461 aa12.96□□□□□ -0.34
ZEB2-201ENST00000303660 TDRD9Q8NDG6 1382 aaKnown RBP12.95□□□□□ -0.34
ZEB2-201ENST00000303660 FAM50AQ14320 339 aaKnown RBP12.95□□□□□ -0.34
ZEB2-201ENST00000303660 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
ZEB2-201ENST00000303660 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
ZEB2-201ENST00000303660 ANP32AP39687 249 aaKnown RBP12.93□□□□□ -0.34
ZEB2-201ENST00000303660 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
ZEB2-201ENST00000303660 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
ZEB2-201ENST00000303660 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
ZEB2-201ENST00000303660 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
ZEB2-201ENST00000303660 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
ZEB2-201ENST00000303660 FBLN2P98095 1184 aa12.9□□□□□ -0.34
ZEB2-201ENST00000303660 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
ZEB2-201ENST00000303660 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
ZEB2-201ENST00000303660 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
ZEB2-201ENST00000303660 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
ZEB2-201ENST00000303660 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
ZEB2-201ENST00000303660 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.351e-7■■■■□ 21.2
ZEB2-201ENST00000303660 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
ZEB2-201ENST00000303660 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
ZEB2-201ENST00000303660 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.35
ZEB2-201ENST00000303660 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
ZEB2-201ENST00000303660 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
ZEB2-201ENST00000303660 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
ZEB2-201ENST00000303660 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
ZEB2-201ENST00000303660 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
ZEB2-201ENST00000303660 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
ZEB2-201ENST00000303660 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
ZEB2-201ENST00000303660 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
ZEB2-201ENST00000303660 UBE2Q2Q8WVN8 375 aa12.79□□□□□ -0.36
ZEB2-201ENST00000303660 ARHGAP35Q9NRY4 1499 aa12.79□□□□□ -0.36
ZEB2-201ENST00000303660 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
ZEB2-201ENST00000303660 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
ZEB2-201ENST00000303660 FHOD3Q2V2M9 1422 aa12.77□□□□□ -0.36
ZEB2-201ENST00000303660 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.36
ZEB2-201ENST00000303660 ABCA10Q8WWZ4 1543 aa12.77□□□□□ -0.37
ZEB2-201ENST00000303660 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
ZEB2-201ENST00000303660 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
ZEB2-201ENST00000303660 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
ZEB2-201ENST00000303660 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
ZEB2-201ENST00000303660 IPO9Q96P70 1041 aaKnown RBP12.72□□□□□ -0.37
ZEB2-201ENST00000303660 PRDM2Q13029 1718 aa12.72□□□□□ -0.37
ZEB2-201ENST00000303660 TIMELESSQ9UNS1 1208 aa12.71□□□□□ -0.37
ZEB2-201ENST00000303660 FMN1Q68DA7 1419 aa12.7□□□□□ -0.38
ZEB2-201ENST00000303660 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■□□ 19.1
ZEB2-201ENST00000303660 B4GALNT3Q6L9W6 998 aa12.7□□□□□ -0.38
ZEB2-201ENST00000303660 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
ZEB2-201ENST00000303660 USP35Q9P2H5 1018 aa12.69□□□□□ -0.38
ZEB2-201ENST00000303660 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
ZEB2-201ENST00000303660 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
ZEB2-201ENST00000303660 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
ZEB2-201ENST00000303660 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
ZEB2-201ENST00000303660 NEFMP07197 916 aa12.67□□□□□ -0.38
ZEB2-201ENST00000303660 HIRIP3Q9BW71 556 aaPredicted RBP12.65□□□□□ -0.38
ZEB2-201ENST00000303660 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.39
ZEB2-201ENST00000303660 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
ZEB2-201ENST00000303660 CHIC2Q9UKJ5 165 aa12.62□□□□□ -0.39
ZEB2-201ENST00000303660 GRIN2BQ13224 1484 aa12.61□□□□□ -0.39
ZEB2-201ENST00000303660 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
ZEB2-201ENST00000303660 CUL7Q14999 1698 aa12.6□□□□□ -0.39
ZEB2-201ENST00000303660 TONSLQ96HA7 1378 aa12.59□□□□□ -0.39
ZEB2-201ENST00000303660 CASKIN1Q8WXD9 1431 aa12.59□□□□□ -0.39
ZEB2-201ENST00000303660 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.39
ZEB2-201ENST00000303660 EFCAB5A4FU69 1503 aa12.58□□□□□ -0.4
ZEB2-201ENST00000303660 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
ZEB2-201ENST00000303660 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
ZEB2-201ENST00000303660 PHLDB1Q86UU1 1377 aa12.58□□□□□ -0.4
ZEB2-201ENST00000303660 ZNF777Q9ULD5 760 aaPredicted RBP12.58□□□□□ -0.4
ZEB2-201ENST00000303660 SIN3AQ96ST3 1273 aa12.58□□□□□ -0.4
ZEB2-201ENST00000303660 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
ZEB2-201ENST00000303660 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
ZEB2-201ENST00000303660 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
ZEB2-201ENST00000303660 SETD5Q9C0A6 1442 aa12.57□□□□□ -0.4
ZEB2-201ENST00000303660 RRP7BPQ9NSQ0 103 aa12.56□□□□□ -0.4
ZEB2-201ENST00000303660 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
ZEB2-201ENST00000303660 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
ZEB2-201ENST00000303660 PKNOX2Q96KN3 472 aa12.56□□□□□ -0.4
ZEB2-201ENST00000303660 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
ZEB2-201ENST00000303660 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
ZEB2-201ENST00000303660 MRS2Q9HD23 443 aa12.53□□□□□ -0.4
ZEB2-201ENST00000303660 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
ZEB2-201ENST00000303660 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.4
ZEB2-201ENST00000303660 PCF11O94913 1555 aaKnown RBP12.51□□□□□ -0.41
ZEB2-201ENST00000303660 C11orf95C9JLR9 678 aaPredicted RBP12.51□□□□□ -0.41
ZEB2-201ENST00000303660 MAP3K1Q13233 1512 aa12.5□□□□□ -0.41
ZEB2-201ENST00000303660 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
ZEB2-201ENST00000303660 GSE1Q14687 1217 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms