RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
RFX2-201ENST00000303657 FHOD3Q2V2M9 1422 aa15.29■□□□□ 0.04
RFX2-201ENST00000303657 CHIC2Q9UKJ5 165 aa15.28■□□□□ 0.04
RFX2-201ENST00000303657 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
RFX2-201ENST00000303657 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.04
RFX2-201ENST00000303657 CCNB3Q8WWL7 1395 aa15.26■□□□□ 0.03
RFX2-201ENST00000303657 MTUS2Q5JR59 1369 aa15.25■□□□□ 0.03
RFX2-201ENST00000303657 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
RFX2-201ENST00000303657 ARHGAP35Q9NRY4 1499 aa15.24■□□□□ 0.03
RFX2-201ENST00000303657 TSHZ2Q9NRE2 1034 aa15.23■□□□□ 0.03
RFX2-201ENST00000303657 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
RFX2-201ENST00000303657 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
RFX2-201ENST00000303657 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.03
RFX2-201ENST00000303657 HIRIP3Q9BW71 556 aaPredicted RBP15.21■□□□□ 0.02
RFX2-201ENST00000303657 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
RFX2-201ENST00000303657 ERICH3Q5RHP9 1530 aa15.2■□□□□ 0.02
RFX2-201ENST00000303657 TOPBP1Q92547 1522 aa15.19■□□□□ 0.02
RFX2-201ENST00000303657 NEFLP07196 543 aa15.19■□□□□ 0.02
RFX2-201ENST00000303657 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
RFX2-201ENST00000303657 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
RFX2-201ENST00000303657 RRP7BPQ9NSQ0 103 aa15.17■□□□□ 0.02
RFX2-201ENST00000303657 FKBP8Q14318 412 aa15.17■□□□□ 0.02
RFX2-201ENST00000303657 FHAD1B1AJZ9 1412 aa15.16■□□□□ 0.02
RFX2-201ENST00000303657 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.014e-6■■■■■ 31
RFX2-201ENST00000303657 GAPVD1Q14C86 1478 aa15.12■□□□□ 0.01
RFX2-201ENST00000303657 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
RFX2-201ENST00000303657 RAB3GAP2Q9H2M9 1393 aa15.11■□□□□ 0.01
RFX2-201ENST00000303657 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
RFX2-201ENST00000303657 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
RFX2-201ENST00000303657 PHLDB1Q86UU1 1377 aa15.09■□□□□ 0.01
RFX2-201ENST00000303657 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0
RFX2-201ENST00000303657 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
RFX2-201ENST00000303657 DDX10Q13206 875 aaKnown RBP15.05■□□□□ 0
RFX2-201ENST00000303657 POLR3GLQ9BT43 218 aa15.04■□□□□ -0
RFX2-201ENST00000303657 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
RFX2-201ENST00000303657 FMN1Q68DA7 1419 aa15.02■□□□□ -0
RFX2-201ENST00000303657 SETD5Q9C0A6 1442 aa15.02□□□□□ -0.01
RFX2-201ENST00000303657 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
RFX2-201ENST00000303657 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
RFX2-201ENST00000303657 ZNF326Q5BKZ1 582 aaKnown RBP15□□□□□ -0.01
RFX2-201ENST00000303657 KCNH8Q96L42 1107 aa15□□□□□ -0.01
RFX2-201ENST00000303657 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
RFX2-201ENST00000303657 FOXD1Q16676 465 aa14.97□□□□□ -0.01
RFX2-201ENST00000303657 RRBP1Q9P2E9 1410 aaKnown RBP14.96□□□□□ -0.01
RFX2-201ENST00000303657 CLSPNQ9HAW4 1339 aa14.96□□□□□ -0.01
RFX2-201ENST00000303657 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
RFX2-201ENST00000303657 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.01
RFX2-201ENST00000303657 IRX6P78412 446 aaPredicted RBP14.93□□□□□ -0.02
RFX2-201ENST00000303657 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
RFX2-201ENST00000303657 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
RFX2-201ENST00000303657 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
RFX2-201ENST00000303657 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
RFX2-201ENST00000303657 PCF11O94913 1555 aaKnown RBP14.89□□□□□ -0.03
RFX2-201ENST00000303657 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
RFX2-201ENST00000303657 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
RFX2-201ENST00000303657 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
RFX2-201ENST00000303657 PLEKHD1A6NEE1 506 aa14.87□□□□□ -0.03
RFX2-201ENST00000303657 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
RFX2-201ENST00000303657 FGD6Q6ZV73 1430 aa14.85□□□□□ -0.03
RFX2-201ENST00000303657 NBR1Q14596 966 aa14.84□□□□□ -0.03
RFX2-201ENST00000303657 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
RFX2-201ENST00000303657 ANP32CO43423 234 aa14.84□□□□□ -0.03
RFX2-201ENST00000303657 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
RFX2-201ENST00000303657 NCOA2Q15596 1464 aa14.81□□□□□ -0.04
RFX2-201ENST00000303657 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
RFX2-201ENST00000303657 PRDM2Q13029 1718 aa14.81□□□□□ -0.04
RFX2-201ENST00000303657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
RFX2-201ENST00000303657 PPP1R15AO75807 674 aaPredicted RBP14.8□□□□□ -0.04
RFX2-201ENST00000303657 SNAPC4Q5SXM2 1469 aa14.79□□□□□ -0.04
RFX2-201ENST00000303657 EFCAB5A4FU69 1503 aa14.79□□□□□ -0.04
RFX2-201ENST00000303657 TSPY4P0CV99 314 aa14.78□□□□□ -0.04
RFX2-201ENST00000303657 TSPY10P0CW01 314 aa14.78□□□□□ -0.04
RFX2-201ENST00000303657 PRKCSHP14314 528 aaPredicted RBP14.78□□□□□ -0.04
RFX2-201ENST00000303657 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
RFX2-201ENST00000303657 CUL7Q14999 1698 aa14.77□□□□□ -0.04
RFX2-201ENST00000303657 MYOM3Q5VTT5 1437 aa14.77□□□□□ -0.04
RFX2-201ENST00000303657 MPHOSPH9Q99550 1183 aa14.77□□□□□ -0.04
RFX2-201ENST00000303657 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
RFX2-201ENST00000303657 CCDC18Q5T9S5 1454 aa14.75□□□□□ -0.05
RFX2-201ENST00000303657 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
RFX2-201ENST00000303657 CARMIL2Q6F5E8 1435 aa14.72□□□□□ -0.05
RFX2-201ENST00000303657 HNRNPMP52272 730 aaKnown RBP eCLIP14.71□□□□□ -0.05
RFX2-201ENST00000303657 DEKP35659 375 aaKnown RBP14.71□□□□□ -0.05
RFX2-201ENST00000303657 PTPRKQ15262 1439 aa14.71□□□□□ -0.05
RFX2-201ENST00000303657 L3MBTL2Q969R5 705 aa14.7□□□□□ -0.06
RFX2-201ENST00000303657 RTN4Q9NQC3 1192 aaKnown RBP14.7□□□□□ -0.06
RFX2-201ENST00000303657 SENP3-EIF4A1A0A087X0R7 540 aa14.69□□□□□ -0.06
RFX2-201ENST00000303657 MAP3K1Q13233 1512 aa14.69□□□□□ -0.06
RFX2-201ENST00000303657 PRG4Q92954 1404 aaPredicted RBP14.69□□□□□ -0.06
RFX2-201ENST00000303657 EIF4G2P78344 907 aaKnown RBP eCLIP14.69□□□□□ -0.062e-7■■□□□ 13.7
RFX2-201ENST00000303657 IQGAP2Q13576 1575 aa14.69□□□□□ -0.06
RFX2-201ENST00000303657 MSH5O43196 834 aa14.68□□□□□ -0.06
RFX2-201ENST00000303657 RGL3Q3MIN7 710 aa14.68□□□□□ -0.06
RFX2-201ENST00000303657 HNRNPUQ00839 825 aaKnown RBP eCLIP14.68□□□□□ -0.06
RFX2-201ENST00000303657 EPRSP07814 1512 aaKnown RBP14.68□□□□□ -0.06
RFX2-201ENST00000303657 PKD2Q13563 968 aa14.66□□□□□ -0.06
RFX2-201ENST00000303657 RTL5Q5HYW3 569 aaPredicted RBP14.66□□□□□ -0.06
RFX2-201ENST00000303657 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
RFX2-201ENST00000303657 TIMELESSQ9UNS1 1208 aa14.66□□□□□ -0.06
RFX2-201ENST00000303657 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms