RNA–Protein interactions for RNA: ENST00000302118.5

PCSK9-201, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK9, Length 3,637 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-201ENST00000302118 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
PCSK9-201ENST00000302118 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
PCSK9-201ENST00000302118 RRP7BPQ9NSQ0 103 aa17.35■□□□□ 0.37
PCSK9-201ENST00000302118 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
PCSK9-201ENST00000302118 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
PCSK9-201ENST00000302118 IGF1RP08069 1367 aa17.33■□□□□ 0.37
PCSK9-201ENST00000302118 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.36
PCSK9-201ENST00000302118 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.36
PCSK9-201ENST00000302118 NEFLP07196 543 aa17.32■□□□□ 0.36
PCSK9-201ENST00000302118 FKBP8Q14318 412 aa17.31■□□□□ 0.36
PCSK9-201ENST00000302118 FBLN2P98095 1184 aa17.3■□□□□ 0.36
PCSK9-201ENST00000302118 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
PCSK9-201ENST00000302118 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
PCSK9-201ENST00000302118 SENP3-EIF4A1A0A087X0R7 540 aa17.29■□□□□ 0.36
PCSK9-201ENST00000302118 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
PCSK9-201ENST00000302118 ANP32CO43423 234 aa17.28■□□□□ 0.36
PCSK9-201ENST00000302118 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
PCSK9-201ENST00000302118 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.35
PCSK9-201ENST00000302118 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
PCSK9-201ENST00000302118 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
PCSK9-201ENST00000302118 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
PCSK9-201ENST00000302118 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
PCSK9-201ENST00000302118 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
PCSK9-201ENST00000302118 FOXD1Q16676 465 aa17.22■□□□□ 0.35
PCSK9-201ENST00000302118 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
PCSK9-201ENST00000302118 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
PCSK9-201ENST00000302118 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
PCSK9-201ENST00000302118 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
PCSK9-201ENST00000302118 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.333e-7■■□□□ 11.4
PCSK9-201ENST00000302118 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
PCSK9-201ENST00000302118 ERICH3Q5RHP9 1530 aa17.1■□□□□ 0.33
PCSK9-201ENST00000302118 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
PCSK9-201ENST00000302118 RRBP1Q9P2E9 1410 aaKnown RBP17.09■□□□□ 0.33
PCSK9-201ENST00000302118 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
PCSK9-201ENST00000302118 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
PCSK9-201ENST00000302118 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.33
PCSK9-201ENST00000302118 PPP1R15AO75807 674 aaPredicted RBP17.08■□□□□ 0.32
PCSK9-201ENST00000302118 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
PCSK9-201ENST00000302118 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
PCSK9-201ENST00000302118 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.319e-8■■■■■ 36.1
PCSK9-201ENST00000302118 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
PCSK9-201ENST00000302118 PRKCSHP14314 528 aaPredicted RBP16.97■□□□□ 0.31
PCSK9-201ENST00000302118 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
PCSK9-201ENST00000302118 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
PCSK9-201ENST00000302118 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
PCSK9-201ENST00000302118 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
PCSK9-201ENST00000302118 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
PCSK9-201ENST00000302118 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
PCSK9-201ENST00000302118 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
PCSK9-201ENST00000302118 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■■■■■ 27.1
PCSK9-201ENST00000302118 MAPKBP1O60336 1514 aa16.92■□□□□ 0.3
PCSK9-201ENST00000302118 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
PCSK9-201ENST00000302118 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
PCSK9-201ENST00000302118 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
PCSK9-201ENST00000302118 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
PCSK9-201ENST00000302118 TIAM1Q13009 1591 aa16.92■□□□□ 0.3
PCSK9-201ENST00000302118 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
PCSK9-201ENST00000302118 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
PCSK9-201ENST00000302118 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
PCSK9-201ENST00000302118 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
PCSK9-201ENST00000302118 MPHOSPH9Q99550 1183 aa16.88■□□□□ 0.29
PCSK9-201ENST00000302118 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
PCSK9-201ENST00000302118 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
PCSK9-201ENST00000302118 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
PCSK9-201ENST00000302118 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
PCSK9-201ENST00000302118 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
PCSK9-201ENST00000302118 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
PCSK9-201ENST00000302118 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
PCSK9-201ENST00000302118 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
PCSK9-201ENST00000302118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.28
PCSK9-201ENST00000302118 CCDC184Q52MB2 194 aa16.82■□□□□ 0.28
PCSK9-201ENST00000302118 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
PCSK9-201ENST00000302118 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
PCSK9-201ENST00000302118 MYT1LQ9UL68 1186 aa16.8■□□□□ 0.28
PCSK9-201ENST00000302118 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
PCSK9-201ENST00000302118 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
PCSK9-201ENST00000302118 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
PCSK9-201ENST00000302118 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
PCSK9-201ENST00000302118 NCOA2Q15596 1464 aa16.77■□□□□ 0.28
PCSK9-201ENST00000302118 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
PCSK9-201ENST00000302118 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
PCSK9-201ENST00000302118 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
PCSK9-201ENST00000302118 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
PCSK9-201ENST00000302118 MYOM3Q5VTT5 1437 aa16.73■□□□□ 0.27
PCSK9-201ENST00000302118 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
PCSK9-201ENST00000302118 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
PCSK9-201ENST00000302118 PKD2Q13563 968 aa16.71■□□□□ 0.27
PCSK9-201ENST00000302118 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
PCSK9-201ENST00000302118 NBPF8Q3BBV2 869 aa16.7■□□□□ 0.26
PCSK9-201ENST00000302118 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
PCSK9-201ENST00000302118 NAIPQ13075 1403 aa16.69■□□□□ 0.26
PCSK9-201ENST00000302118 MAP3K1Q13233 1512 aa16.68■□□□□ 0.26
PCSK9-201ENST00000302118 TSPY4P0CV99 314 aa16.67■□□□□ 0.26
PCSK9-201ENST00000302118 TSPY10P0CW01 314 aa16.67■□□□□ 0.26
PCSK9-201ENST00000302118 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
PCSK9-201ENST00000302118 PLEKHD1A6NEE1 506 aa16.66■□□□□ 0.26
PCSK9-201ENST00000302118 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
PCSK9-201ENST00000302118 CARD11Q9BXL7 1154 aa16.65■□□□□ 0.26
PCSK9-201ENST00000302118 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
PCSK9-201ENST00000302118 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms