RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
ATP1A3-201ENST00000302102 CHIC2Q9UKJ5 165 aa16.08■□□□□ 0.16
ATP1A3-201ENST00000302102 ANP32CO43423 234 aa16.07■□□□□ 0.16
ATP1A3-201ENST00000302102 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
ATP1A3-201ENST00000302102 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
ATP1A3-201ENST00000302102 MYT1Q01538 1121 aa16.05■□□□□ 0.16
ATP1A3-201ENST00000302102 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
ATP1A3-201ENST00000302102 TOP2BQ02880 1626 aa16■□□□□ 0.15
ATP1A3-201ENST00000302102 EEA1Q15075 1411 aa15.99■□□□□ 0.15
ATP1A3-201ENST00000302102 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
ATP1A3-201ENST00000302102 LAMC3Q9Y6N6 1575 aa15.97■□□□□ 0.15
ATP1A3-201ENST00000302102 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
ATP1A3-201ENST00000302102 TOPBP1Q92547 1522 aa15.97■□□□□ 0.15
ATP1A3-201ENST00000302102 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
ATP1A3-201ENST00000302102 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
ATP1A3-201ENST00000302102 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
ATP1A3-201ENST00000302102 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
ATP1A3-201ENST00000302102 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
ATP1A3-201ENST00000302102 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
ATP1A3-201ENST00000302102 IGF1RP08069 1367 aa15.88■□□□□ 0.13
ATP1A3-201ENST00000302102 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
ATP1A3-201ENST00000302102 TONSLQ96HA7 1378 aa15.88■□□□□ 0.13
ATP1A3-201ENST00000302102 KIF21AQ7Z4S6 1674 aa15.87■□□□□ 0.13
ATP1A3-201ENST00000302102 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
ATP1A3-201ENST00000302102 SALL2Q9Y467 1007 aaPredicted RBP15.86■□□□□ 0.13
ATP1A3-201ENST00000302102 CHMP7Q8WUX9 453 aaPredicted RBP15.85■□□□□ 0.13
ATP1A3-201ENST00000302102 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
ATP1A3-201ENST00000302102 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
ATP1A3-201ENST00000302102 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
ATP1A3-201ENST00000302102 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.13
ATP1A3-201ENST00000302102 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
ATP1A3-201ENST00000302102 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
ATP1A3-201ENST00000302102 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
ATP1A3-201ENST00000302102 FOXD1Q16676 465 aa15.78■□□□□ 0.12
ATP1A3-201ENST00000302102 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
ATP1A3-201ENST00000302102 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.12
ATP1A3-201ENST00000302102 PRDM2Q13029 1718 aa15.75■□□□□ 0.11
ATP1A3-201ENST00000302102 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
ATP1A3-201ENST00000302102 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
ATP1A3-201ENST00000302102 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
ATP1A3-201ENST00000302102 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
ATP1A3-201ENST00000302102 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
ATP1A3-201ENST00000302102 NPM2Q86SE8 214 aaKnown RBP15.67■□□□□ 0.1
ATP1A3-201ENST00000302102 NBR1Q14596 966 aa15.66■□□□□ 0.1
ATP1A3-201ENST00000302102 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
ATP1A3-201ENST00000302102 KIF21BO75037 1637 aa15.65■□□□□ 0.1
ATP1A3-201ENST00000302102 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
ATP1A3-201ENST00000302102 ANP32EQ9BTT0 268 aa15.64■□□□□ 0.09
ATP1A3-201ENST00000302102 CLSPNQ9HAW4 1339 aa15.63■□□□□ 0.09
ATP1A3-201ENST00000302102 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
ATP1A3-201ENST00000302102 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
ATP1A3-201ENST00000302102 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
ATP1A3-201ENST00000302102 FHOD3Q2V2M9 1422 aa15.61■□□□□ 0.09
ATP1A3-201ENST00000302102 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
ATP1A3-201ENST00000302102 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
ATP1A3-201ENST00000302102 SNAPC4Q5SXM2 1469 aa15.58■□□□□ 0.09
ATP1A3-201ENST00000302102 ARAP1Q96P48 1450 aa15.58■□□□□ 0.09
ATP1A3-201ENST00000302102 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
ATP1A3-201ENST00000302102 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
ATP1A3-201ENST00000302102 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
ATP1A3-201ENST00000302102 ERICH3Q5RHP9 1530 aa15.56■□□□□ 0.08
ATP1A3-201ENST00000302102 WDR62O43379 1518 aa15.55■□□□□ 0.08
ATP1A3-201ENST00000302102 HSPA5P11021 654 aaKnown RBP15.54■□□□□ 0.08
ATP1A3-201ENST00000302102 FHAD1B1AJZ9 1412 aa15.53■□□□□ 0.08
ATP1A3-201ENST00000302102 PHLDB1Q86UU1 1377 aa15.51■□□□□ 0.07
ATP1A3-201ENST00000302102 ARHGAP35Q9NRY4 1499 aa15.51■□□□□ 0.07
ATP1A3-201ENST00000302102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
ATP1A3-201ENST00000302102 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
ATP1A3-201ENST00000302102 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
ATP1A3-201ENST00000302102 CCDC136Q96JN2 1154 aa15.5■□□□□ 0.07
ATP1A3-201ENST00000302102 TMC1Q8TDI8 760 aa15.49■□□□□ 0.07
ATP1A3-201ENST00000302102 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
ATP1A3-201ENST00000302102 RGL3Q3MIN7 710 aa15.49■□□□□ 0.07
ATP1A3-201ENST00000302102 THOC2Q8NI27 1593 aaKnown RBP15.47■□□□□ 0.07
ATP1A3-201ENST00000302102 RTL5Q5HYW3 569 aaPredicted RBP15.47■□□□□ 0.07
ATP1A3-201ENST00000302102 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
ATP1A3-201ENST00000302102 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
ATP1A3-201ENST00000302102 L3MBTL2Q969R5 705 aa15.43■□□□□ 0.06
ATP1A3-201ENST00000302102 BCL11AQ9H165 835 aa15.42■□□□□ 0.06
ATP1A3-201ENST00000302102 DAXXQ9UER7 740 aaPredicted RBP15.41■□□□□ 0.06
ATP1A3-201ENST00000302102 CUL7Q14999 1698 aa15.41■□□□□ 0.06
ATP1A3-201ENST00000302102 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
ATP1A3-201ENST00000302102 GRIN2AQ12879 1464 aa15.38■□□□□ 0.05
ATP1A3-201ENST00000302102 CCER2I3L3R5 266 aa15.37■□□□□ 0.05
ATP1A3-201ENST00000302102 ANP32AP39687 249 aaKnown RBP15.37■□□□□ 0.05
ATP1A3-201ENST00000302102 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
ATP1A3-201ENST00000302102 PBRM1Q86U86 1689 aa15.36■□□□□ 0.05
ATP1A3-201ENST00000302102 SYNJ2O15056 1496 aa15.36■□□□□ 0.05
ATP1A3-201ENST00000302102 WDR97A6NE52 1622 aa15.35■□□□□ 0.05
ATP1A3-201ENST00000302102 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
ATP1A3-201ENST00000302102 ADAMTS12P58397 1594 aa15.34■□□□□ 0.05
ATP1A3-201ENST00000302102 FMN1Q68DA7 1419 aa15.33■□□□□ 0.05
ATP1A3-201ENST00000302102 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
ATP1A3-201ENST00000302102 ZNF644Q9H582 1327 aaPredicted RBP15.32■□□□□ 0.04
ATP1A3-201ENST00000302102 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
ATP1A3-201ENST00000302102 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
ATP1A3-201ENST00000302102 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
ATP1A3-201ENST00000302102 RRBP1Q9P2E9 1410 aaKnown RBP15.3■□□□□ 0.04
ATP1A3-201ENST00000302102 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
ATP1A3-201ENST00000302102 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms