RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 TRIM41Q8WV44 630 aa7.36□□□□□ -1.23
ZNF560-201ENST00000301480 HOXD11P31277 338 aaPredicted RBP7.36□□□□□ -1.23
ZNF560-201ENST00000301480 MAGI1Q96QZ7 1491 aaPredicted RBP7.35□□□□□ -1.23
ZNF560-201ENST00000301480 SOGA1O94964 1423 aa7.35□□□□□ -1.23
ZNF560-201ENST00000301480 RIMBP3CA6NJZ7 1639 aa7.34□□□□□ -1.23
ZNF560-201ENST00000301480 RIMBP3BA6NNM3 1639 aa7.34□□□□□ -1.23
ZNF560-201ENST00000301480 RIMBP3Q9UFD9 1639 aa7.34□□□□□ -1.23
ZNF560-201ENST00000301480 ARHGEF11O15085 1522 aa7.34□□□□□ -1.23
ZNF560-201ENST00000301480 TAOK2Q9UL54 1235 aa7.34□□□□□ -1.24
ZNF560-201ENST00000301480 GRIN2BQ13224 1484 aa7.33□□□□□ -1.24
ZNF560-201ENST00000301480 AQRO60306 1485 aaKnown RBP eCLIP7.31□□□□□ -1.24
ZNF560-201ENST00000301480 SYNJ1O43426 1573 aa7.31□□□□□ -1.24
ZNF560-201ENST00000301480 FGD5Q6ZNL6 1462 aa7.3□□□□□ -1.24
ZNF560-201ENST00000301480 SYNJ2O15056 1496 aa7.3□□□□□ -1.24
ZNF560-201ENST00000301480 CLASP1Q7Z460 1538 aa7.29□□□□□ -1.24
ZNF560-201ENST00000301480 ABCA10Q8WWZ4 1543 aa7.29□□□□□ -1.24
ZNF560-201ENST00000301480 CUX1P39880 1505 aa7.29□□□□□ -1.24
ZNF560-201ENST00000301480 CHD1O14646 1710 aa7.28□□□□□ -1.24
ZNF560-201ENST00000301480 SNAPC4Q5SXM2 1469 aa7.28□□□□□ -1.24
ZNF560-201ENST00000301480 RAD54L2Q9Y4B4 1467 aa7.27□□□□□ -1.25
ZNF560-201ENST00000301480 CHMP7Q8WUX9 453 aaPredicted RBP7.27□□□□□ -1.25
ZNF560-201ENST00000301480 GAPVD1Q14C86 1478 aa7.27□□□□□ -1.25
ZNF560-201ENST00000301480 WRNQ14191 1432 aaPredicted RBP eCLIP7.26□□□□□ -1.25
ZNF560-201ENST00000301480 TDRD9Q8NDG6 1382 aaKnown RBP7.26□□□□□ -1.25
ZNF560-201ENST00000301480 ARAP1Q96P48 1450 aa7.26□□□□□ -1.25
ZNF560-201ENST00000301480 CSRNP3Q8WYN3 585 aa7.25□□□□□ -1.25
ZNF560-201ENST00000301480 ABCA5Q8WWZ7 1642 aa7.24□□□□□ -1.25
ZNF560-201ENST00000301480 RNF216Q9NWF9 866 aaPredicted RBP7.24□□□□□ -1.25
ZNF560-201ENST00000301480 TPRNQ4KMQ1 711 aa7.23□□□□□ -1.25
ZNF560-201ENST00000301480 UBE2Q2Q8WVN8 375 aa7.23□□□□□ -1.25
ZNF560-201ENST00000301480 FBLN2P98095 1184 aa7.23□□□□□ -1.25
ZNF560-201ENST00000301480 CYB5RLQ6IPT4 315 aa7.23□□□□□ -1.25
ZNF560-201ENST00000301480 ERICH3Q5RHP9 1530 aa7.22□□□□□ -1.25
ZNF560-201ENST00000301480 TOP2BQ02880 1626 aa7.22□□□□□ -1.25
ZNF560-201ENST00000301480 BIVM-ERCC5R4GMW8 1640 aa7.22□□□□□ -1.25
ZNF560-201ENST00000301480 PBRM1Q86U86 1689 aa7.22□□□□□ -1.25
ZNF560-201ENST00000301480 FHAD1B1AJZ9 1412 aa7.22□□□□□ -1.25
ZNF560-201ENST00000301480 NUP160Q12769 1436 aa7.22□□□□□ -1.25
ZNF560-201ENST00000301480 CNKSR2Q8WXI2 1034 aa7.21□□□□□ -1.25
ZNF560-201ENST00000301480 PDIA4P13667 645 aaKnown RBP7.21□□□□□ -1.26
ZNF560-201ENST00000301480 NPM2Q86SE8 214 aaKnown RBP7.21□□□□□ -1.26
ZNF560-201ENST00000301480 PPP4R3CPQ6ZMV5 832 aa7.2□□□□□ -1.26
ZNF560-201ENST00000301480 GRIN2AQ12879 1464 aa7.2□□□□□ -1.26
ZNF560-201ENST00000301480 ADAMTS12P58397 1594 aa7.19□□□□□ -1.26
ZNF560-201ENST00000301480 SHROOM2Q13796 1616 aa7.17□□□□□ -1.26
ZNF560-201ENST00000301480 C14orf37Q86TY3 774 aa7.16□□□□□ -1.26
ZNF560-201ENST00000301480 LOC105371045A0A1W2PR82 267 aa7.14□□□□□ -1.27
ZNF560-201ENST00000301480 TRHP20396 242 aaPredicted RBP7.14□□□□□ -1.27
ZNF560-201ENST00000301480 HRCP23327 699 aa7.14□□□□□ -1.27
ZNF560-201ENST00000301480 CEP170Q5SW79 1584 aa7.13□□□□□ -1.27
ZNF560-201ENST00000301480 GTF3C3Q9Y5Q9 886 aa7.13□□□□□ -1.27
ZNF560-201ENST00000301480 SUPT5HO00267 1087 aaKnown RBP7.12□□□□□ -1.27
ZNF560-201ENST00000301480 BCANQ96GW7 911 aa7.12□□□□□ -1.27
ZNF560-201ENST00000301480 KIF27Q86VH2 1401 aa7.11□□□□□ -1.27
ZNF560-201ENST00000301480 PDE4CQ08493 712 aa7.11□□□□□ -1.27
ZNF560-201ENST00000301480 CUL7Q14999 1698 aa7.1□□□□□ -1.27
ZNF560-201ENST00000301480 PKNOX2Q96KN3 472 aa7.1□□□□□ -1.27
ZNF560-201ENST00000301480 KIAA0586Q9BVV6 1533 aa7.1□□□□□ -1.27
ZNF560-201ENST00000301480 JPH4Q96JJ6 628 aa7.1□□□□□ -1.27
ZNF560-201ENST00000301480 MAPKBP1O60336 1514 aa7.08□□□□□ -1.28
ZNF560-201ENST00000301480 PRG4Q92954 1404 aaPredicted RBP7.08□□□□□ -1.28
ZNF560-201ENST00000301480 ANO8Q9HCE9 1232 aaPredicted RBP7.08□□□□□ -1.28
ZNF560-201ENST00000301480 RUSC2Q8N2Y8 1516 aa7.07□□□□□ -1.28
ZNF560-201ENST00000301480 NPM1P06748 294 aaKnown RBP eCLIP7.07□□□□□ -1.28
ZNF560-201ENST00000301480 IGF1RP08069 1367 aa7.07□□□□□ -1.28
ZNF560-201ENST00000301480 CENPBP07199 599 aaPredicted RBP7.06□□□□□ -1.28
ZNF560-201ENST00000301480 HAP1P54257 671 aaPredicted RBP7.06□□□□□ -1.28
ZNF560-201ENST00000301480 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
ZNF560-201ENST00000301480 ABCC10Q5T3U5 1492 aa7.05□□□□□ -1.28
ZNF560-201ENST00000301480 CARMIL2Q6F5E8 1435 aa7.05□□□□□ -1.28
ZNF560-201ENST00000301480 DHX37Q8IY37 1157 aaKnown RBP7.04□□□□□ -1.28
ZNF560-201ENST00000301480 TRIM26Q12899 539 aaPredicted RBP7.04□□□□□ -1.28
ZNF560-201ENST00000301480 ERCC6L2Q5T890 1561 aa7.04□□□□□ -1.28
ZNF560-201ENST00000301480 UHRF1BP1LA0JNW5 1464 aa7.03□□□□□ -1.28
ZNF560-201ENST00000301480 CARMIL1Q5VZK9 1371 aa7.03□□□□□ -1.28
ZNF560-201ENST00000301480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.03□□□□□ -1.28
ZNF560-201ENST00000301480 TNIKQ9UKE5 1360 aa7.01□□□□□ -1.29
ZNF560-201ENST00000301480 PTPRGP23470 1445 aa7□□□□□ -1.29
ZNF560-201ENST00000301480 NEFLP07196 543 aa7□□□□□ -1.29
ZNF560-201ENST00000301480 PLB1Q6P1J6 1458 aa7□□□□□ -1.29
ZNF560-201ENST00000301480 SAMD1Q6SPF0 538 aaPredicted RBP7□□□□□ -1.29
ZNF560-201ENST00000301480 BCL11BQ9C0K0 894 aaPredicted RBP7□□□□□ -1.29
ZNF560-201ENST00000301480 GLI2P10070 1586 aa7□□□□□ -1.29
ZNF560-201ENST00000301480 UGGT2Q9NYU1 1516 aa6.99□□□□□ -1.29
ZNF560-201ENST00000301480 IQGAP2Q13576 1575 aa6.98□□□□□ -1.29
ZNF560-201ENST00000301480 DIP2BQ9P265 1576 aa6.98□□□□□ -1.29
ZNF560-201ENST00000301480 ABCC2Q92887 1545 aa6.98□□□□□ -1.29
ZNF560-201ENST00000301480 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
ZNF560-201ENST00000301480 ADCY10Q96PN6 1610 aa6.98□□□□□ -1.29
ZNF560-201ENST00000301480 KIF13AQ9H1H9 1805 aa6.98□□□□□ -1.29
ZNF560-201ENST00000301480 FBXO3Q9UK99 471 aa6.97□□□□□ -1.29
ZNF560-201ENST00000301480 FAM69CQ0P6D2 419 aa6.96□□□□□ -1.29
ZNF560-201ENST00000301480 TMEM132AQ24JP5 1023 aa6.96□□□□□ -1.29
ZNF560-201ENST00000301480 GOLGA3Q08378 1498 aa6.96□□□□□ -1.29
ZNF560-201ENST00000301480 UACAQ9BZF9 1416 aa6.96□□□□□ -1.3
ZNF560-201ENST00000301480 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
ZNF560-201ENST00000301480 KDM5BQ9UGL1 1544 aa6.95□□□□□ -1.3
ZNF560-201ENST00000301480 TAF7LQ5H9L4 462 aa6.95□□□□□ -1.3
ZNF560-201ENST00000301480 TEX14Q8IWB6 1497 aa6.94□□□□□ -1.3
ZNF560-201ENST00000301480 FGD1P98174 961 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms