RNA–Protein interactions for RNA: ENST00000300403.10

TPX2-201, Transcript of TPX2, microtubule nucleation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPX2, Length 3,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-201ENST00000300403 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
TPX2-201ENST00000300403 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
TPX2-201ENST00000300403 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
TPX2-201ENST00000300403 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
TPX2-201ENST00000300403 FHOD3Q2V2M9 1422 aa17.85■□□□□ 0.45
TPX2-201ENST00000300403 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
TPX2-201ENST00000300403 LRRC9Q6ZRR7 1453 aa17.84■□□□□ 0.45
TPX2-201ENST00000300403 PHLDB1Q86UU1 1377 aa17.84■□□□□ 0.45
TPX2-201ENST00000300403 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
TPX2-201ENST00000300403 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
TPX2-201ENST00000300403 MAP3K1Q13233 1512 aa17.8■□□□□ 0.44
TPX2-201ENST00000300403 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
TPX2-201ENST00000300403 PCF11O94913 1555 aaKnown RBP17.79■□□□□ 0.44
TPX2-201ENST00000300403 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
TPX2-201ENST00000300403 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
TPX2-201ENST00000300403 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
TPX2-201ENST00000300403 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.43
TPX2-201ENST00000300403 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
TPX2-201ENST00000300403 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
TPX2-201ENST00000300403 CFAP43Q8NDM7 1665 aa17.68■□□□□ 0.42
TPX2-201ENST00000300403 CASKIN1Q8WXD9 1431 aa17.68■□□□□ 0.42
TPX2-201ENST00000300403 CUL7Q14999 1698 aa17.68■□□□□ 0.42
TPX2-201ENST00000300403 EFCAB5A4FU69 1503 aa17.68■□□□□ 0.42
TPX2-201ENST00000300403 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
TPX2-201ENST00000300403 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
TPX2-201ENST00000300403 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
TPX2-201ENST00000300403 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
TPX2-201ENST00000300403 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
TPX2-201ENST00000300403 CTTNBP2Q8WZ74 1663 aa17.63■□□□□ 0.41
TPX2-201ENST00000300403 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.411e-12■■■■■ 29
TPX2-201ENST00000300403 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.4
TPX2-201ENST00000300403 SNAPC4Q5SXM2 1469 aa17.57■□□□□ 0.4
TPX2-201ENST00000300403 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
TPX2-201ENST00000300403 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
TPX2-201ENST00000300403 HIRIP3Q9BW71 556 aaPredicted RBP17.55■□□□□ 0.4
TPX2-201ENST00000300403 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
TPX2-201ENST00000300403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.39
TPX2-201ENST00000300403 ARID3CA6NKF2 412 aa17.52■□□□□ 0.39
TPX2-201ENST00000300403 KCNH8Q96L42 1107 aa17.51■□□□□ 0.39
TPX2-201ENST00000300403 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
TPX2-201ENST00000300403 NCOA2Q15596 1464 aa17.49■□□□□ 0.39
TPX2-201ENST00000300403 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
TPX2-201ENST00000300403 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
TPX2-201ENST00000300403 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
TPX2-201ENST00000300403 PPP1R15AO75807 674 aaPredicted RBP17.47■□□□□ 0.39
TPX2-201ENST00000300403 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
TPX2-201ENST00000300403 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.39
TPX2-201ENST00000300403 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
TPX2-201ENST00000300403 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
TPX2-201ENST00000300403 TONSLQ96HA7 1378 aa17.46■□□□□ 0.39
TPX2-201ENST00000300403 RRP7BPQ9NSQ0 103 aa17.44■□□□□ 0.38
TPX2-201ENST00000300403 LRRIQ1Q96JM4 1722 aa17.43■□□□□ 0.38
TPX2-201ENST00000300403 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
TPX2-201ENST00000300403 TARBP1Q13395 1621 aaKnown RBP17.43■□□□□ 0.38
TPX2-201ENST00000300403 NAIPQ13075 1403 aa17.4■□□□□ 0.38
TPX2-201ENST00000300403 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
TPX2-201ENST00000300403 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
TPX2-201ENST00000300403 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.38
TPX2-201ENST00000300403 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
TPX2-201ENST00000300403 TRIM52Q96A61 297 aa17.38■□□□□ 0.37
TPX2-201ENST00000300403 MAGI3Q5TCQ9 1506 aa17.38■□□□□ 0.37
TPX2-201ENST00000300403 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
TPX2-201ENST00000300403 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
TPX2-201ENST00000300403 IQGAP2Q13576 1575 aa17.35■□□□□ 0.37
TPX2-201ENST00000300403 UGGT2Q9NYU1 1516 aa17.34■□□□□ 0.37
TPX2-201ENST00000300403 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
TPX2-201ENST00000300403 CDK13Q14004 1512 aaKnown RBP17.33■□□□□ 0.37
TPX2-201ENST00000300403 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
TPX2-201ENST00000300403 EPRSP07814 1512 aaKnown RBP17.32■□□□□ 0.36
TPX2-201ENST00000300403 ANP32CO43423 234 aa17.31■□□□□ 0.36
TPX2-201ENST00000300403 HECW1Q76N89 1606 aa17.31■□□□□ 0.36
TPX2-201ENST00000300403 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
TPX2-201ENST00000300403 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
TPX2-201ENST00000300403 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
TPX2-201ENST00000300403 FOXD1Q16676 465 aa17.26■□□□□ 0.35
TPX2-201ENST00000300403 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
TPX2-201ENST00000300403 WDR62O43379 1518 aa17.23■□□□□ 0.35
TPX2-201ENST00000300403 FBLN2P98095 1184 aa17.23■□□□□ 0.35
TPX2-201ENST00000300403 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
TPX2-201ENST00000300403 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
TPX2-201ENST00000300403 BCANQ96GW7 911 aa17.22■□□□□ 0.35
TPX2-201ENST00000300403 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
TPX2-201ENST00000300403 MIA2Q96PC5 1412 aa17.21■□□□□ 0.34
TPX2-201ENST00000300403 CCER2I3L3R5 266 aa17.2■□□□□ 0.34
TPX2-201ENST00000300403 KDM6BO15054 1643 aa17.2■□□□□ 0.34
TPX2-201ENST00000300403 KIAA0586Q9BVV6 1533 aa17.18■□□□□ 0.34
TPX2-201ENST00000300403 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
TPX2-201ENST00000300403 CDK11AQ9UQ88 783 aaPredicted RBP17.17■□□□□ 0.34
TPX2-201ENST00000300403 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
TPX2-201ENST00000300403 DENND4BO75064 1496 aaPredicted RBP17.17■□□□□ 0.34
TPX2-201ENST00000300403 FKBP8Q14318 412 aa17.16■□□□□ 0.34
TPX2-201ENST00000300403 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
TPX2-201ENST00000300403 L3MBTL2Q969R5 705 aa17.16■□□□□ 0.34
TPX2-201ENST00000300403 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
TPX2-201ENST00000300403 GCC2Q8IWJ2 1684 aa17.15■□□□□ 0.34
TPX2-201ENST00000300403 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
TPX2-201ENST00000300403 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
TPX2-201ENST00000300403 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
TPX2-201ENST00000300403 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
TPX2-201ENST00000300403 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms