RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 KCNH8Q96L42 1107 aa21.26■□□□□ 0.99
SPIDR-201ENST00000297423 POLA1P09884 1462 aaPredicted RBP21.25■□□□□ 0.99
SPIDR-201ENST00000297423 IGF1RP08069 1367 aa21.25■□□□□ 0.99
SPIDR-201ENST00000297423 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
SPIDR-201ENST00000297423 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
SPIDR-201ENST00000297423 TRIM52Q96A61 297 aa21.23■□□□□ 0.99
SPIDR-201ENST00000297423 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
SPIDR-201ENST00000297423 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
SPIDR-201ENST00000297423 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
SPIDR-201ENST00000297423 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
SPIDR-201ENST00000297423 DDX10Q13206 875 aaKnown RBP21.15■□□□□ 0.98
SPIDR-201ENST00000297423 IRX6P78412 446 aaPredicted RBP21.15■□□□□ 0.98
SPIDR-201ENST00000297423 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
SPIDR-201ENST00000297423 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
SPIDR-201ENST00000297423 RBM19Q9Y4C8 960 aaKnown RBP21.12■□□□□ 0.97
SPIDR-201ENST00000297423 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
SPIDR-201ENST00000297423 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SPIDR-201ENST00000297423 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
SPIDR-201ENST00000297423 P3H3Q8IVL6 736 aa21.08■□□□□ 0.96
SPIDR-201ENST00000297423 VPS8Q8N3P4 1428 aa21.07■□□□□ 0.96
SPIDR-201ENST00000297423 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
SPIDR-201ENST00000297423 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
SPIDR-201ENST00000297423 NBR1Q14596 966 aa20.96■□□□□ 0.95
SPIDR-201ENST00000297423 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
SPIDR-201ENST00000297423 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
SPIDR-201ENST00000297423 FBLN2P98095 1184 aa20.94■□□□□ 0.94
SPIDR-201ENST00000297423 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
SPIDR-201ENST00000297423 CUL7Q14999 1698 aa20.88■□□□□ 0.93
SPIDR-201ENST00000297423 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
SPIDR-201ENST00000297423 ARHGAP35Q9NRY4 1499 aa20.87■□□□□ 0.93
SPIDR-201ENST00000297423 ANP32CO43423 234 aa20.87■□□□□ 0.93
SPIDR-201ENST00000297423 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
SPIDR-201ENST00000297423 GRIN2BQ13224 1484 aa20.84■□□□□ 0.93
SPIDR-201ENST00000297423 WDR62O43379 1518 aa20.82■□□□□ 0.92
SPIDR-201ENST00000297423 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
SPIDR-201ENST00000297423 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
SPIDR-201ENST00000297423 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
SPIDR-201ENST00000297423 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
SPIDR-201ENST00000297423 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
SPIDR-201ENST00000297423 FHOD3Q2V2M9 1422 aa20.77■□□□□ 0.92
SPIDR-201ENST00000297423 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
SPIDR-201ENST00000297423 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
SPIDR-201ENST00000297423 WDR97A6NE52 1622 aa20.77■□□□□ 0.91
SPIDR-201ENST00000297423 SIN3AQ96ST3 1273 aa20.74■□□□□ 0.91
SPIDR-201ENST00000297423 RTN4Q9NQC3 1192 aaKnown RBP20.73■□□□□ 0.91
SPIDR-201ENST00000297423 DEKP35659 375 aaKnown RBP20.73■□□□□ 0.91
SPIDR-201ENST00000297423 MSH5O43196 834 aa20.72■□□□□ 0.91
SPIDR-201ENST00000297423 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
SPIDR-201ENST00000297423 RTL5Q5HYW3 569 aaPredicted RBP20.68■□□□□ 0.9
SPIDR-201ENST00000297423 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
SPIDR-201ENST00000297423 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
SPIDR-201ENST00000297423 PRKCSHP14314 528 aaPredicted RBP20.66■□□□□ 0.9
SPIDR-201ENST00000297423 EFCAB5A4FU69 1503 aa20.66■□□□□ 0.9
SPIDR-201ENST00000297423 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
SPIDR-201ENST00000297423 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.89
SPIDR-201ENST00000297423 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
SPIDR-201ENST00000297423 CTTNBP2Q8WZ74 1663 aa20.62■□□□□ 0.89
SPIDR-201ENST00000297423 ARID3CA6NKF2 412 aa20.62■□□□□ 0.89
SPIDR-201ENST00000297423 POLR3GLQ9BT43 218 aa20.61■□□□□ 0.89
SPIDR-201ENST00000297423 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
SPIDR-201ENST00000297423 B4GALNT3Q6L9W6 998 aa20.59■□□□□ 0.89
SPIDR-201ENST00000297423 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
SPIDR-201ENST00000297423 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.89
SPIDR-201ENST00000297423 NPM2Q86SE8 214 aaKnown RBP20.57■□□□□ 0.88
SPIDR-201ENST00000297423 FAM9BQ8IZU0 186 aa20.57■□□□□ 0.88
SPIDR-201ENST00000297423 CCDC136Q96JN2 1154 aa20.57■□□□□ 0.88
SPIDR-201ENST00000297423 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
SPIDR-201ENST00000297423 CASKIN1Q8WXD9 1431 aa20.55■□□□□ 0.88
SPIDR-201ENST00000297423 ANO8Q9HCE9 1232 aaPredicted RBP20.54■□□□□ 0.88
SPIDR-201ENST00000297423 IQGAP2Q13576 1575 aa20.54■□□□□ 0.88
SPIDR-201ENST00000297423 GRIN2AQ12879 1464 aa20.54■□□□□ 0.88
SPIDR-201ENST00000297423 FYCO1Q9BQS8 1478 aa20.52■□□□□ 0.88
SPIDR-201ENST00000297423 SYNJ2O15056 1496 aa20.51■□□□□ 0.87
SPIDR-201ENST00000297423 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
SPIDR-201ENST00000297423 KIAA0586Q9BVV6 1533 aa20.51■□□□□ 0.87
SPIDR-201ENST00000297423 PCF11O94913 1555 aaKnown RBP20.5■□□□□ 0.87
SPIDR-201ENST00000297423 TIAM1Q13009 1591 aa20.5■□□□□ 0.87
SPIDR-201ENST00000297423 JPH4Q96JJ6 628 aa20.49■□□□□ 0.87
SPIDR-201ENST00000297423 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.49■□□□□ 0.87
SPIDR-201ENST00000297423 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
SPIDR-201ENST00000297423 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
SPIDR-201ENST00000297423 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
SPIDR-201ENST00000297423 MAP3K1Q13233 1512 aa20.45■□□□□ 0.86
SPIDR-201ENST00000297423 ANP32AP39687 249 aaKnown RBP20.41■□□□□ 0.86
SPIDR-201ENST00000297423 NOP58Q9Y2X3 529 aaKnown RBP20.4■□□□□ 0.86
SPIDR-201ENST00000297423 SAMD9Q5K651 1589 aa20.4■□□□□ 0.86
SPIDR-201ENST00000297423 RRBP1Q9P2E9 1410 aaKnown RBP20.37■□□□□ 0.85
SPIDR-201ENST00000297423 PHLDB1Q86UU1 1377 aa20.37■□□□□ 0.85
SPIDR-201ENST00000297423 ZBTB47Q9UFB7 747 aaPredicted RBP20.36■□□□□ 0.85
SPIDR-201ENST00000297423 UGGT2Q9NYU1 1516 aa20.35■□□□□ 0.85
SPIDR-201ENST00000297423 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
SPIDR-201ENST00000297423 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.85
SPIDR-201ENST00000297423 LAS1LQ9Y4W2 734 aaKnown RBP20.33■□□□□ 0.84
SPIDR-201ENST00000297423 PPP4R2Q9NY27 417 aa20.33■□□□□ 0.84
SPIDR-201ENST00000297423 MYT1LQ9UL68 1186 aa20.33■□□□□ 0.84
SPIDR-201ENST00000297423 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
SPIDR-201ENST00000297423 PAK3O75914 559 aaPredicted RBP20.31■□□□□ 0.84
SPIDR-201ENST00000297423 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
SPIDR-201ENST00000297423 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
SPIDR-201ENST00000297423 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms