RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
NKX6-1-201ENST00000295886 PHLDB1Q86UU1 1377 aa28.43■■■□□ 2.14
NKX6-1-201ENST00000295886 RAD54L2Q9Y4B4 1467 aa28.43■■■□□ 2.14
NKX6-1-201ENST00000295886 LRRC9Q6ZRR7 1453 aa28.41■■■□□ 2.14
NKX6-1-201ENST00000295886 FHOD3Q2V2M9 1422 aa28.35■■■□□ 2.13
NKX6-1-201ENST00000295886 NESP48681 1621 aa28.33■■■□□ 2.13
NKX6-1-201ENST00000295886 MAPKBP1O60336 1514 aa28.33■■■□□ 2.13
NKX6-1-201ENST00000295886 PCF11O94913 1555 aaKnown RBP28.33■■■□□ 2.13
NKX6-1-201ENST00000295886 MAP3K1Q13233 1512 aa28.32■■■□□ 2.12
NKX6-1-201ENST00000295886 SETD5Q9C0A6 1442 aa28.3■■■□□ 2.12
NKX6-1-201ENST00000295886 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
NKX6-1-201ENST00000295886 SIN3AQ96ST3 1273 aa28.3■■■□□ 2.12
NKX6-1-201ENST00000295886 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
NKX6-1-201ENST00000295886 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
NKX6-1-201ENST00000295886 DNMBPQ6XZF7 1577 aa28.22■■■□□ 2.11
NKX6-1-201ENST00000295886 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
NKX6-1-201ENST00000295886 KCNH8Q96L42 1107 aa28.19■■■□□ 2.1
NKX6-1-201ENST00000295886 CFAP43Q8NDM7 1665 aa28.18■■■□□ 2.1
NKX6-1-201ENST00000295886 WDR97A6NE52 1622 aa28.11■■■□□ 2.09
NKX6-1-201ENST00000295886 FYCO1Q9BQS8 1478 aa28.1■■■□□ 2.09
NKX6-1-201ENST00000295886 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
NKX6-1-201ENST00000295886 HIRIP3Q9BW71 556 aaPredicted RBP28.1■■■□□ 2.09
NKX6-1-201ENST00000295886 CASKIN1Q8WXD9 1431 aa28.09■■■□□ 2.09
NKX6-1-201ENST00000295886 DDX10Q13206 875 aaKnown RBP28.06■■■□□ 2.08
NKX6-1-201ENST00000295886 EFCAB5A4FU69 1503 aa28.04■■■□□ 2.08
NKX6-1-201ENST00000295886 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
NKX6-1-201ENST00000295886 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
NKX6-1-201ENST00000295886 CUL7Q14999 1698 aa28.01■■■□□ 2.08
NKX6-1-201ENST00000295886 SUPT16HQ9Y5B9 1047 aaKnown RBP28.01■■■□□ 2.07
NKX6-1-201ENST00000295886 CTTNBP2Q8WZ74 1663 aa28.01■■■□□ 2.07
NKX6-1-201ENST00000295886 MTUS2Q5JR59 1369 aa27.98■■■□□ 2.07
NKX6-1-201ENST00000295886 AQRO60306 1485 aaKnown RBP eCLIP27.97■■■□□ 2.07
NKX6-1-201ENST00000295886 FMN1Q68DA7 1419 aa27.97■■■□□ 2.07
NKX6-1-201ENST00000295886 FGD6Q6ZV73 1430 aa27.96■■■□□ 2.07
NKX6-1-201ENST00000295886 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.07
NKX6-1-201ENST00000295886 PTPRKQ15262 1439 aa27.91■■■□□ 2.06
NKX6-1-201ENST00000295886 PPP1R15AO75807 674 aaPredicted RBP27.9■■■□□ 2.06
NKX6-1-201ENST00000295886 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.06
NKX6-1-201ENST00000295886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
NKX6-1-201ENST00000295886 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
NKX6-1-201ENST00000295886 CCDC18Q5T9S5 1454 aa27.84■■■□□ 2.05
NKX6-1-201ENST00000295886 LRRIQ1Q96JM4 1722 aa27.83■■■□□ 2.05
NKX6-1-201ENST00000295886 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
NKX6-1-201ENST00000295886 TIMELESSQ9UNS1 1208 aa27.81■■■□□ 2.04
NKX6-1-201ENST00000295886 NCOA2Q15596 1464 aa27.81■■■□□ 2.04
NKX6-1-201ENST00000295886 SAMD9Q5K651 1589 aa27.8■■■□□ 2.04
NKX6-1-201ENST00000295886 TONSLQ96HA7 1378 aa27.79■■■□□ 2.04
NKX6-1-201ENST00000295886 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
NKX6-1-201ENST00000295886 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
NKX6-1-201ENST00000295886 HFM1A2PYH4 1435 aa27.76■■■□□ 2.03
NKX6-1-201ENST00000295886 MYOM3Q5VTT5 1437 aa27.76■■■□□ 2.03
NKX6-1-201ENST00000295886 CHIC2Q9UKJ5 165 aa27.75■■■□□ 2.03
NKX6-1-201ENST00000295886 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
NKX6-1-201ENST00000295886 RRP7BPQ9NSQ0 103 aa27.73■■■□□ 2.03
NKX6-1-201ENST00000295886 PTPN23Q9H3S7 1636 aa27.73■■■□□ 2.03
NKX6-1-201ENST00000295886 NAIPQ13075 1403 aa27.73■■■□□ 2.03
NKX6-1-201ENST00000295886 UACAQ9BZF9 1416 aa27.72■■■□□ 2.03
NKX6-1-201ENST00000295886 BCANQ96GW7 911 aa27.71■■■□□ 2.03
NKX6-1-201ENST00000295886 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
NKX6-1-201ENST00000295886 MAGI3Q5TCQ9 1506 aa27.69■■■□□ 2.02
NKX6-1-201ENST00000295886 TRIM52Q96A61 297 aa27.67■■■□□ 2.02
NKX6-1-201ENST00000295886 ANP32CO43423 234 aa27.65■■■□□ 2.02
NKX6-1-201ENST00000295886 SUPT6HQ7KZ85 1726 aaKnown RBP27.65■■■□□ 2.02
NKX6-1-201ENST00000295886 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
NKX6-1-201ENST00000295886 TARBP1Q13395 1621 aaKnown RBP27.6■■■□□ 2.01
NKX6-1-201ENST00000295886 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
NKX6-1-201ENST00000295886 FKBP8Q14318 412 aa27.59■■■□□ 2.01
NKX6-1-201ENST00000295886 THOC2Q8NI27 1593 aaKnown RBP27.57■■■□□ 2
NKX6-1-201ENST00000295886 CDK13Q14004 1512 aaKnown RBP27.55■■■□□ 2
NKX6-1-201ENST00000295886 TSHZ2Q9NRE2 1034 aa27.54■■■□□ 2
NKX6-1-201ENST00000295886 CCER2I3L3R5 266 aa27.53■■■□□ 2
NKX6-1-201ENST00000295886 ARHGEF11O15085 1522 aa27.52■■■□□ 2
NKX6-1-201ENST00000295886 FOXD1Q16676 465 aa27.51■■□□□ 1.99
NKX6-1-201ENST00000295886 EPRSP07814 1512 aaKnown RBP27.5■■□□□ 1.99
NKX6-1-201ENST00000295886 KDM5BQ9UGL1 1544 aa27.5■■□□□ 1.99
NKX6-1-201ENST00000295886 KDM6BO15054 1643 aa27.49■■□□□ 1.99
NKX6-1-201ENST00000295886 IQGAP2Q13576 1575 aa27.48■■□□□ 1.99
NKX6-1-201ENST00000295886 DENND4BO75064 1496 aaPredicted RBP27.47■■□□□ 1.99
NKX6-1-201ENST00000295886 PBRM1Q86U86 1689 aa27.47■■□□□ 1.99
NKX6-1-201ENST00000295886 HECW1Q76N89 1606 aa27.46■■□□□ 1.99
NKX6-1-201ENST00000295886 TCOF1Q13428 1488 aaKnown RBP27.43■■□□□ 1.98
NKX6-1-201ENST00000295886 HSPA5P11021 654 aaKnown RBP27.42■■□□□ 1.98
NKX6-1-201ENST00000295886 MPHOSPH9Q99550 1183 aa27.41■■□□□ 1.98
NKX6-1-201ENST00000295886 ADAMTS12P58397 1594 aa27.41■■□□□ 1.98
NKX6-1-201ENST00000295886 WASHC2AQ641Q2 1341 aa27.38■■□□□ 1.97
NKX6-1-201ENST00000295886 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
NKX6-1-201ENST00000295886 ZNF644Q9H582 1327 aaPredicted RBP27.37■■□□□ 1.97
NKX6-1-201ENST00000295886 WDR62O43379 1518 aa27.37■■□□□ 1.97
NKX6-1-201ENST00000295886 GCC2Q8IWJ2 1684 aa27.36■■□□□ 1.97
NKX6-1-201ENST00000295886 NEFLP07196 543 aa27.36■■□□□ 1.97
NKX6-1-201ENST00000295886 L3MBTL2Q969R5 705 aa27.35■■□□□ 1.97
NKX6-1-201ENST00000295886 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
NKX6-1-201ENST00000295886 MIA2Q96PC5 1412 aa27.31■■□□□ 1.96
NKX6-1-201ENST00000295886 HNRNPUQ00839 825 aaKnown RBP eCLIP27.3■■□□□ 1.96
NKX6-1-201ENST00000295886 EIF4G2P78344 907 aaKnown RBP eCLIP27.29■■□□□ 1.96
NKX6-1-201ENST00000295886 AKNAQ7Z591 1439 aa27.27■■□□□ 1.96
NKX6-1-201ENST00000295886 C11orf95C9JLR9 678 aaPredicted RBP27.26■■□□□ 1.95
NKX6-1-201ENST00000295886 DAPK1P53355 1430 aa27.24■■□□□ 1.95
NKX6-1-201ENST00000295886 CCDC184Q52MB2 194 aa27.22■■□□□ 1.95
NKX6-1-201ENST00000295886 DISP1Q96F81 1524 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms