RNA–Protein interactions for RNA: ENST00000295461.9

NIPAL1-201, Transcript of NIPA like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL1, Length 5,300 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-201ENST00000295461 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.17
NIPAL1-201ENST00000295461 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
NIPAL1-201ENST00000295461 SETD5Q9C0A6 1442 aa16.05■□□□□ 0.16
NIPAL1-201ENST00000295461 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
NIPAL1-201ENST00000295461 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
NIPAL1-201ENST00000295461 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
NIPAL1-201ENST00000295461 KIF21BO75037 1637 aa16.03■□□□□ 0.16
NIPAL1-201ENST00000295461 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
NIPAL1-201ENST00000295461 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.15
NIPAL1-201ENST00000295461 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
NIPAL1-201ENST00000295461 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
NIPAL1-201ENST00000295461 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
NIPAL1-201ENST00000295461 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
NIPAL1-201ENST00000295461 KDM2AQ9Y2K7 1162 aa15.98■□□□□ 0.15
NIPAL1-201ENST00000295461 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
NIPAL1-201ENST00000295461 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.15
NIPAL1-201ENST00000295461 IGF1RP08069 1367 aa15.95■□□□□ 0.14
NIPAL1-201ENST00000295461 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
NIPAL1-201ENST00000295461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
NIPAL1-201ENST00000295461 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
NIPAL1-201ENST00000295461 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
NIPAL1-201ENST00000295461 SALL2Q9Y467 1007 aaPredicted RBP15.91■□□□□ 0.14
NIPAL1-201ENST00000295461 FOXD1Q16676 465 aa15.9■□□□□ 0.14
NIPAL1-201ENST00000295461 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
NIPAL1-201ENST00000295461 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
NIPAL1-201ENST00000295461 TSPY4P0CV99 314 aa15.9■□□□□ 0.14
NIPAL1-201ENST00000295461 TSPY10P0CW01 314 aa15.9■□□□□ 0.14
NIPAL1-201ENST00000295461 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
NIPAL1-201ENST00000295461 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
NIPAL1-201ENST00000295461 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
NIPAL1-201ENST00000295461 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
NIPAL1-201ENST00000295461 FMN1Q68DA7 1419 aa15.86■□□□□ 0.13
NIPAL1-201ENST00000295461 DAXXQ9UER7 740 aaPredicted RBP15.86■□□□□ 0.13
NIPAL1-201ENST00000295461 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
NIPAL1-201ENST00000295461 PPP1R15AO75807 674 aaPredicted RBP15.85■□□□□ 0.13
NIPAL1-201ENST00000295461 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
NIPAL1-201ENST00000295461 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
NIPAL1-201ENST00000295461 TMC1Q8TDI8 760 aa15.84■□□□□ 0.13
NIPAL1-201ENST00000295461 CUX1P39880 1505 aa15.83■□□□□ 0.13
NIPAL1-201ENST00000295461 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.13
NIPAL1-201ENST00000295461 PRXQ9BXM0 1461 aa15.83■□□□□ 0.12
NIPAL1-201ENST00000295461 PDS5BQ9NTI5 1447 aa15.82■□□□□ 0.12
NIPAL1-201ENST00000295461 CFTRP13569 1480 aa15.81■□□□□ 0.12
NIPAL1-201ENST00000295461 HSPA5P11021 654 aaKnown RBP15.81■□□□□ 0.12
NIPAL1-201ENST00000295461 PHLDB1Q86UU1 1377 aa15.81■□□□□ 0.12
NIPAL1-201ENST00000295461 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
NIPAL1-201ENST00000295461 RGL3Q3MIN7 710 aa15.79■□□□□ 0.12
NIPAL1-201ENST00000295461 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
NIPAL1-201ENST00000295461 ERCC6Q03468 1493 aa15.75■□□□□ 0.11
NIPAL1-201ENST00000295461 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
NIPAL1-201ENST00000295461 CCER2I3L3R5 266 aa15.74■□□□□ 0.11
NIPAL1-201ENST00000295461 LRRC9Q6ZRR7 1453 aa15.73■□□□□ 0.11
NIPAL1-201ENST00000295461 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
NIPAL1-201ENST00000295461 RRBP1Q9P2E9 1410 aaKnown RBP15.73■□□□□ 0.11
NIPAL1-201ENST00000295461 CARD11Q9BXL7 1154 aa15.73■□□□□ 0.11
NIPAL1-201ENST00000295461 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
NIPAL1-201ENST00000295461 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
NIPAL1-201ENST00000295461 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
NIPAL1-201ENST00000295461 L3MBTL2Q969R5 705 aa15.7■□□□□ 0.1
NIPAL1-201ENST00000295461 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
NIPAL1-201ENST00000295461 NESP48681 1621 aa15.69■□□□□ 0.1
NIPAL1-201ENST00000295461 PKD2Q13563 968 aa15.66■□□□□ 0.1
NIPAL1-201ENST00000295461 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
NIPAL1-201ENST00000295461 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
NIPAL1-201ENST00000295461 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
NIPAL1-201ENST00000295461 FGD6Q6ZV73 1430 aa15.64■□□□□ 0.09
NIPAL1-201ENST00000295461 DCAF11Q8TEB1 546 aa15.64■□□□□ 0.09
NIPAL1-201ENST00000295461 CANXP27824 592 aaKnown RBP15.64■□□□□ 0.09
NIPAL1-201ENST00000295461 B4GALNT3Q6L9W6 998 aa15.6■□□□□ 0.09
NIPAL1-201ENST00000295461 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
NIPAL1-201ENST00000295461 CASKIN1Q8WXD9 1431 aa15.6■□□□□ 0.09
NIPAL1-201ENST00000295461 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
NIPAL1-201ENST00000295461 CC2D2AQ9P2K1 1620 aa15.58■□□□□ 0.08
NIPAL1-201ENST00000295461 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
NIPAL1-201ENST00000295461 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.08
NIPAL1-201ENST00000295461 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
NIPAL1-201ENST00000295461 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
NIPAL1-201ENST00000295461 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
NIPAL1-201ENST00000295461 ZNF644Q9H582 1327 aaPredicted RBP15.56■□□□□ 0.08
NIPAL1-201ENST00000295461 PPP4R2Q9NY27 417 aa15.56■□□□□ 0.08
NIPAL1-201ENST00000295461 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
NIPAL1-201ENST00000295461 NBR1Q14596 966 aa15.55■□□□□ 0.08
NIPAL1-201ENST00000295461 NUP155O75694 1391 aa15.55■□□□□ 0.08
NIPAL1-201ENST00000295461 ANP32EQ9BTT0 268 aa15.55■□□□□ 0.08
NIPAL1-201ENST00000295461 CC2D1BQ5T0F9 858 aaKnown RBP15.54■□□□□ 0.08
NIPAL1-201ENST00000295461 NCOA2Q15596 1464 aa15.54■□□□□ 0.08
NIPAL1-201ENST00000295461 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.08
NIPAL1-201ENST00000295461 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
NIPAL1-201ENST00000295461 CARMIL2Q6F5E8 1435 aa15.53■□□□□ 0.08
NIPAL1-201ENST00000295461 BIVM-ERCC5R4GMW8 1640 aa15.53■□□□□ 0.08
NIPAL1-201ENST00000295461 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
NIPAL1-201ENST00000295461 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
NIPAL1-201ENST00000295461 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
NIPAL1-201ENST00000295461 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
NIPAL1-201ENST00000295461 BCL11AQ9H165 835 aa15.51■□□□□ 0.07
NIPAL1-201ENST00000295461 ANKRD30AQ9BXX3 1397 aa15.5■□□□□ 0.07
NIPAL1-201ENST00000295461 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
NIPAL1-201ENST00000295461 PCF11O94913 1555 aaKnown RBP15.47■□□□□ 0.07
NIPAL1-201ENST00000295461 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
NIPAL1-201ENST00000295461 ZBTB47Q9UFB7 747 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms