RNA–Protein interactions for RNA: ENST00000287497.12

ITGAM-201, Transcript of integrin subunit alpha M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGAM, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-201ENST00000287497 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
ITGAM-201ENST00000287497 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
ITGAM-201ENST00000287497 MIER1Q8N108 512 aa17.14■□□□□ 0.33
ITGAM-201ENST00000287497 KIF21BO75037 1637 aa17.14■□□□□ 0.33
ITGAM-201ENST00000287497 ACIN1Q9UKV3 1341 aaKnown RBP17.14■□□□□ 0.33
ITGAM-201ENST00000287497 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
ITGAM-201ENST00000287497 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
ITGAM-201ENST00000287497 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
ITGAM-201ENST00000287497 RRP7BPQ9NSQ0 103 aa17.07■□□□□ 0.32
ITGAM-201ENST00000287497 ARHGAP35Q9NRY4 1499 aa17.06■□□□□ 0.32
ITGAM-201ENST00000287497 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
ITGAM-201ENST00000287497 BIVM-ERCC5R4GMW8 1640 aa17.05■□□□□ 0.32
ITGAM-201ENST00000287497 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
ITGAM-201ENST00000287497 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
ITGAM-201ENST00000287497 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.32
ITGAM-201ENST00000287497 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.31
ITGAM-201ENST00000287497 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
ITGAM-201ENST00000287497 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
ITGAM-201ENST00000287497 SIN3AQ96ST3 1273 aa16.98■□□□□ 0.31
ITGAM-201ENST00000287497 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
ITGAM-201ENST00000287497 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
ITGAM-201ENST00000287497 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
ITGAM-201ENST00000287497 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
ITGAM-201ENST00000287497 JPH4Q96JJ6 628 aa16.92■□□□□ 0.3
ITGAM-201ENST00000287497 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
ITGAM-201ENST00000287497 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
ITGAM-201ENST00000287497 ZNF326Q5BKZ1 582 aaKnown RBP16.89■□□□□ 0.3
ITGAM-201ENST00000287497 POLR3GLQ9BT43 218 aa16.89■□□□□ 0.29
ITGAM-201ENST00000287497 PHLDB1Q86UU1 1377 aa16.89■□□□□ 0.29
ITGAM-201ENST00000287497 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
ITGAM-201ENST00000287497 FOXD1Q16676 465 aa16.86■□□□□ 0.29
ITGAM-201ENST00000287497 DDX10Q13206 875 aaKnown RBP16.84■□□□□ 0.29
ITGAM-201ENST00000287497 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
ITGAM-201ENST00000287497 ZNF644Q9H582 1327 aaPredicted RBP16.82■□□□□ 0.28
ITGAM-201ENST00000287497 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
ITGAM-201ENST00000287497 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
ITGAM-201ENST00000287497 RAB3GAP2Q9H2M9 1393 aa16.81■□□□□ 0.28
ITGAM-201ENST00000287497 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
ITGAM-201ENST00000287497 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
ITGAM-201ENST00000287497 DHX57Q6P158 1386 aaKnown RBP16.8■□□□□ 0.28
ITGAM-201ENST00000287497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
ITGAM-201ENST00000287497 BCANQ96GW7 911 aa16.77■□□□□ 0.28
ITGAM-201ENST00000287497 LRRC9Q6ZRR7 1453 aa16.75■□□□□ 0.27
ITGAM-201ENST00000287497 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
ITGAM-201ENST00000287497 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
ITGAM-201ENST00000287497 PCF11O94913 1555 aaKnown RBP16.7■□□□□ 0.26
ITGAM-201ENST00000287497 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
ITGAM-201ENST00000287497 CDK13Q14004 1512 aaKnown RBP16.67■□□□□ 0.26
ITGAM-201ENST00000287497 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
ITGAM-201ENST00000287497 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
ITGAM-201ENST00000287497 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
ITGAM-201ENST00000287497 CASKIN1Q8WXD9 1431 aa16.66■□□□□ 0.26
ITGAM-201ENST00000287497 HNRNPMP52272 730 aaKnown RBP eCLIP16.66■□□□□ 0.26
ITGAM-201ENST00000287497 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
ITGAM-201ENST00000287497 TSPY4P0CV99 314 aa16.64■□□□□ 0.25
ITGAM-201ENST00000287497 TSPY10P0CW01 314 aa16.64■□□□□ 0.25
ITGAM-201ENST00000287497 CARMIL2Q6F5E8 1435 aa16.63■□□□□ 0.25
ITGAM-201ENST00000287497 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
ITGAM-201ENST00000287497 KDM2AQ9Y2K7 1162 aa16.63■□□□□ 0.25
ITGAM-201ENST00000287497 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
ITGAM-201ENST00000287497 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
ITGAM-201ENST00000287497 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
ITGAM-201ENST00000287497 PTPRGP23470 1445 aa16.6■□□□□ 0.25
ITGAM-201ENST00000287497 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
ITGAM-201ENST00000287497 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
ITGAM-201ENST00000287497 CUL7Q14999 1698 aa16.58■□□□□ 0.25
ITGAM-201ENST00000287497 RRBP1Q9P2E9 1410 aaKnown RBP16.57■□□□□ 0.24
ITGAM-201ENST00000287497 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
ITGAM-201ENST00000287497 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
ITGAM-201ENST00000287497 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
ITGAM-201ENST00000287497 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
ITGAM-201ENST00000287497 TARBP1Q13395 1621 aaKnown RBP16.55■□□□□ 0.24
ITGAM-201ENST00000287497 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
ITGAM-201ENST00000287497 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
ITGAM-201ENST00000287497 ANP32CO43423 234 aa16.54■□□□□ 0.24
ITGAM-201ENST00000287497 ABCA5Q8WWZ7 1642 aa16.54■□□□□ 0.24
ITGAM-201ENST00000287497 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
ITGAM-201ENST00000287497 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.23
ITGAM-201ENST00000287497 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
ITGAM-201ENST00000287497 MYOM3Q5VTT5 1437 aa16.51■□□□□ 0.23
ITGAM-201ENST00000287497 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
ITGAM-201ENST00000287497 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
ITGAM-201ENST00000287497 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
ITGAM-201ENST00000287497 WDR62O43379 1518 aa16.48■□□□□ 0.23
ITGAM-201ENST00000287497 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
ITGAM-201ENST00000287497 NEFLP07196 543 aa16.47■□□□□ 0.23
ITGAM-201ENST00000287497 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
ITGAM-201ENST00000287497 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
ITGAM-201ENST00000287497 PTPRKQ15262 1439 aa16.46■□□□□ 0.23
ITGAM-201ENST00000287497 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
ITGAM-201ENST00000287497 PKD2Q13563 968 aa16.46■□□□□ 0.23
ITGAM-201ENST00000287497 FKBP8Q14318 412 aa16.45■□□□□ 0.22
ITGAM-201ENST00000287497 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
ITGAM-201ENST00000287497 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
ITGAM-201ENST00000287497 CTTNBP2Q8WZ74 1663 aa16.43■□□□□ 0.22
ITGAM-201ENST00000287497 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
ITGAM-201ENST00000287497 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
ITGAM-201ENST00000287497 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
ITGAM-201ENST00000287497 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
ITGAM-201ENST00000287497 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms