RNA–Protein interactions for RNA: ENST00000285419.7

TMEM55A-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM55A, Length 2,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-201ENST00000285419 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
TMEM55A-201ENST00000285419 RAB3GAP2Q9H2M9 1393 aa15.41■□□□□ 0.06
TMEM55A-201ENST00000285419 HNRNPUQ00839 825 aaKnown RBP eCLIP15.41■□□□□ 0.06
TMEM55A-201ENST00000285419 CFTRP13569 1480 aa15.4■□□□□ 0.06
TMEM55A-201ENST00000285419 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
TMEM55A-201ENST00000285419 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
TMEM55A-201ENST00000285419 ANO8Q9HCE9 1232 aaPredicted RBP15.39■□□□□ 0.05
TMEM55A-201ENST00000285419 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
TMEM55A-201ENST00000285419 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
TMEM55A-201ENST00000285419 TOP2BQ02880 1626 aa15.34■□□□□ 0.05
TMEM55A-201ENST00000285419 MAPKBP1O60336 1514 aa15.33■□□□□ 0.04
TMEM55A-201ENST00000285419 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
TMEM55A-201ENST00000285419 PRDM2Q13029 1718 aa15.32■□□□□ 0.04
TMEM55A-201ENST00000285419 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
TMEM55A-201ENST00000285419 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
TMEM55A-201ENST00000285419 MYT1LQ9UL68 1186 aa15.31■□□□□ 0.04
TMEM55A-201ENST00000285419 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
TMEM55A-201ENST00000285419 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
TMEM55A-201ENST00000285419 PAK3O75914 559 aaPredicted RBP15.28■□□□□ 0.04
TMEM55A-201ENST00000285419 CUX2O14529 1486 aa15.28■□□□□ 0.04
TMEM55A-201ENST00000285419 NOP58Q9Y2X3 529 aaKnown RBP15.26■□□□□ 0.03
TMEM55A-201ENST00000285419 PPP4R2Q9NY27 417 aa15.26■□□□□ 0.03
TMEM55A-201ENST00000285419 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
TMEM55A-201ENST00000285419 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
TMEM55A-201ENST00000285419 CUX1P39880 1505 aa15.24■□□□□ 0.03
TMEM55A-201ENST00000285419 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
TMEM55A-201ENST00000285419 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
TMEM55A-201ENST00000285419 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
TMEM55A-201ENST00000285419 FAM9BQ8IZU0 186 aa15.17■□□□□ 0.02
TMEM55A-201ENST00000285419 IL27Q8NEV9 243 aa15.17■□□□□ 0.02
TMEM55A-201ENST00000285419 RTL5Q5HYW3 569 aaPredicted RBP15.16■□□□□ 0.02
TMEM55A-201ENST00000285419 CCDC184Q52MB2 194 aa15.16■□□□□ 0.02
TMEM55A-201ENST00000285419 TONSLQ96HA7 1378 aa15.15■□□□□ 0.02
TMEM55A-201ENST00000285419 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
TMEM55A-201ENST00000285419 FANCD2Q9BXW9 1451 aa15.13■□□□□ 0.01
TMEM55A-201ENST00000285419 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.12■□□□□ 0.01
TMEM55A-201ENST00000285419 PRXQ9BXM0 1461 aa15.12■□□□□ 0.01
TMEM55A-201ENST00000285419 ERICH6BQ5W0A0 696 aa15.11■□□□□ 0.01
TMEM55A-201ENST00000285419 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
TMEM55A-201ENST00000285419 LAMC3Q9Y6N6 1575 aa15.1■□□□□ 0.01
TMEM55A-201ENST00000285419 ARHGAP35Q9NRY4 1499 aa15.09■□□□□ 0.01
TMEM55A-201ENST00000285419 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
TMEM55A-201ENST00000285419 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
TMEM55A-201ENST00000285419 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
TMEM55A-201ENST00000285419 SENP3-EIF4A1A0A087X0R7 540 aa15.08■□□□□ 0
TMEM55A-201ENST00000285419 CNGB1Q14028 1251 aaPredicted RBP15.08■□□□□ 0
TMEM55A-201ENST00000285419 P3H3Q8IVL6 736 aa15.08■□□□□ 0
TMEM55A-201ENST00000285419 NESP48681 1621 aa15.07■□□□□ 0
TMEM55A-201ENST00000285419 IPO9Q96P70 1041 aaKnown RBP15.06■□□□□ 0
TMEM55A-201ENST00000285419 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
TMEM55A-201ENST00000285419 MRS2Q9HD23 443 aa15.05■□□□□ -0
TMEM55A-201ENST00000285419 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
TMEM55A-201ENST00000285419 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
TMEM55A-201ENST00000285419 FGD5Q6ZNL6 1462 aa15.04■□□□□ -0
TMEM55A-201ENST00000285419 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
TMEM55A-201ENST00000285419 HSPA5P11021 654 aaKnown RBP15.02□□□□□ -0.01
TMEM55A-201ENST00000285419 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
TMEM55A-201ENST00000285419 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
TMEM55A-201ENST00000285419 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
TMEM55A-201ENST00000285419 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
TMEM55A-201ENST00000285419 LRRC9Q6ZRR7 1453 aa14.98□□□□□ -0.01
TMEM55A-201ENST00000285419 TIAM1Q13009 1591 aa14.96□□□□□ -0.01
TMEM55A-201ENST00000285419 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.01
TMEM55A-201ENST00000285419 PRKRIP1Q9H875 184 aaPredicted RBP14.95□□□□□ -0.02
TMEM55A-201ENST00000285419 AKNAQ7Z591 1439 aa14.95□□□□□ -0.02
TMEM55A-201ENST00000285419 NEFMP07197 916 aa14.95□□□□□ -0.02
TMEM55A-201ENST00000285419 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
TMEM55A-201ENST00000285419 IGF1RP08069 1367 aa14.93□□□□□ -0.02
TMEM55A-201ENST00000285419 C11orf95C9JLR9 678 aaPredicted RBP14.93□□□□□ -0.02
TMEM55A-201ENST00000285419 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
TMEM55A-201ENST00000285419 EIF4G2P78344 907 aaKnown RBP eCLIP14.92□□□□□ -0.02
TMEM55A-201ENST00000285419 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
TMEM55A-201ENST00000285419 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
TMEM55A-201ENST00000285419 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
TMEM55A-201ENST00000285419 KIF21AQ7Z4S6 1674 aa14.89□□□□□ -0.03
TMEM55A-201ENST00000285419 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
TMEM55A-201ENST00000285419 CCDC18Q5T9S5 1454 aa14.87□□□□□ -0.03
TMEM55A-201ENST00000285419 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
TMEM55A-201ENST00000285419 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
TMEM55A-201ENST00000285419 CNTLNQ9NXG0 1405 aa14.86□□□□□ -0.03
TMEM55A-201ENST00000285419 BRPF3Q9ULD4 1205 aa14.86□□□□□ -0.03
TMEM55A-201ENST00000285419 NUDCQ9Y266 331 aa14.83□□□□□ -0.03
TMEM55A-201ENST00000285419 RRP7BPQ9NSQ0 103 aa14.83□□□□□ -0.04
TMEM55A-201ENST00000285419 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
TMEM55A-201ENST00000285419 UACAQ9BZF9 1416 aa14.82□□□□□ -0.04
TMEM55A-201ENST00000285419 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.048e-7■■■■■ 28.7
TMEM55A-201ENST00000285419 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
TMEM55A-201ENST00000285419 FOXD1Q16676 465 aa14.82□□□□□ -0.04
TMEM55A-201ENST00000285419 PTPRKQ15262 1439 aa14.81□□□□□ -0.04
TMEM55A-201ENST00000285419 CCDC7Q96M83 1385 aa14.8□□□□□ -0.04
TMEM55A-201ENST00000285419 UBE2Q2Q8WVN8 375 aa14.8□□□□□ -0.04
TMEM55A-201ENST00000285419 L3MBTL2Q969R5 705 aa14.79□□□□□ -0.04
TMEM55A-201ENST00000285419 CUL7Q14999 1698 aa14.78□□□□□ -0.04
TMEM55A-201ENST00000285419 SMG6Q86US8 1419 aaKnown RBP14.78□□□□□ -0.04
TMEM55A-201ENST00000285419 PDE4AP27815 886 aa14.78□□□□□ -0.04
TMEM55A-201ENST00000285419 FHOD3Q2V2M9 1422 aa14.77□□□□□ -0.04
TMEM55A-201ENST00000285419 KDM5BQ9UGL1 1544 aa14.77□□□□□ -0.04
TMEM55A-201ENST00000285419 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
TMEM55A-201ENST00000285419 ABCA5Q8WWZ7 1642 aa14.77□□□□□ -0.05
TMEM55A-201ENST00000285419 USP35Q9P2H5 1018 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms