RNA–Protein interactions for RNA: ENST00000281043.3

MYCN-201, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MYCN, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-201ENST00000281043 IGF1RP08069 1367 aa30.57■■■□□ 2.48
MYCN-201ENST00000281043 RBM19Q9Y4C8 960 aaKnown RBP30.54■■■□□ 2.48
MYCN-201ENST00000281043 CCNB3Q8WWL7 1395 aa30.48■■■□□ 2.47
MYCN-201ENST00000281043 RAD54L2Q9Y4B4 1467 aa30.47■■■□□ 2.47
MYCN-201ENST00000281043 ITGAEP38570 1179 aa30.42■■■□□ 2.46
MYCN-201ENST00000281043 CARMIL1Q5VZK9 1371 aa30.42■■■□□ 2.46
MYCN-201ENST00000281043 TOPBP1Q92547 1522 aa30.39■■■□□ 2.46
MYCN-201ENST00000281043 NEFLP07196 543 aa30.39■■■□□ 2.45
MYCN-201ENST00000281043 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
MYCN-201ENST00000281043 RAB3GAP2Q9H2M9 1393 aa30.36■■■□□ 2.45
MYCN-201ENST00000281043 ARHGAP35Q9NRY4 1499 aa30.36■■■□□ 2.45
MYCN-201ENST00000281043 MAPKBP1O60336 1514 aa30.36■■■□□ 2.45
MYCN-201ENST00000281043 DNMBPQ6XZF7 1577 aa30.35■■■□□ 2.45
MYCN-201ENST00000281043 DDX10Q13206 875 aaKnown RBP30.35■■■□□ 2.45
MYCN-201ENST00000281043 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
MYCN-201ENST00000281043 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
MYCN-201ENST00000281043 MSH5O43196 834 aa30.23■■■□□ 2.43
MYCN-201ENST00000281043 WDR97A6NE52 1622 aa30.23■■■□□ 2.43
MYCN-201ENST00000281043 ABCA10Q8WWZ4 1543 aa30.22■■■□□ 2.43
MYCN-201ENST00000281043 PPP1R15AO75807 674 aaPredicted RBP30.21■■■□□ 2.43
MYCN-201ENST00000281043 P3H3Q8IVL6 736 aa30.2■■■□□ 2.43
MYCN-201ENST00000281043 SETD5Q9C0A6 1442 aa30.18■■■□□ 2.42
MYCN-201ENST00000281043 SIN3AQ96ST3 1273 aa30.16■■■□□ 2.42
MYCN-201ENST00000281043 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
MYCN-201ENST00000281043 TRIM52Q96A61 297 aa30.15■■■□□ 2.42
MYCN-201ENST00000281043 CCER2I3L3R5 266 aa30.15■■■□□ 2.42
MYCN-201ENST00000281043 PDS5BQ9NTI5 1447 aa30.13■■■□□ 2.41
MYCN-201ENST00000281043 FANCIQ9NVI1 1328 aa30.09■■■□□ 2.41
MYCN-201ENST00000281043 ANP32CO43423 234 aa30.09■■■□□ 2.41
MYCN-201ENST00000281043 TIMELESSQ9UNS1 1208 aa30.05■■■□□ 2.4
MYCN-201ENST00000281043 KIF21AQ7Z4S6 1674 aa30.04■■■□□ 2.4
MYCN-201ENST00000281043 HIRIP3Q9BW71 556 aaPredicted RBP30.03■■■□□ 2.4
MYCN-201ENST00000281043 TIAM1Q13009 1591 aa30.03■■■□□ 2.4
MYCN-201ENST00000281043 ATP1B4Q9UN42 357 aaPredicted RBP30■■■□□ 2.39
MYCN-201ENST00000281043 MAP3K1Q13233 1512 aa30■■■□□ 2.39
MYCN-201ENST00000281043 ERICH6Q7L0X2 663 aa29.99■■■□□ 2.39
MYCN-201ENST00000281043 FHOD3Q2V2M9 1422 aa29.96■■■□□ 2.39
MYCN-201ENST00000281043 FAM50AQ14320 339 aaKnown RBP29.95■■■□□ 2.39
MYCN-201ENST00000281043 PHLDB1Q86UU1 1377 aa29.95■■■□□ 2.38
MYCN-201ENST00000281043 LRRC9Q6ZRR7 1453 aa29.94■■■□□ 2.38
MYCN-201ENST00000281043 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
MYCN-201ENST00000281043 CDK11AQ9UQ88 783 aaPredicted RBP29.92■■■□□ 2.38
MYCN-201ENST00000281043 MYT1LQ9UL68 1186 aa29.89■■■□□ 2.37
MYCN-201ENST00000281043 CUL7Q14999 1698 aa29.88■■■□□ 2.37
MYCN-201ENST00000281043 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
MYCN-201ENST00000281043 PCF11O94913 1555 aaKnown RBP29.82■■■□□ 2.36
MYCN-201ENST00000281043 FHAD1B1AJZ9 1412 aa29.81■■■□□ 2.36
MYCN-201ENST00000281043 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
MYCN-201ENST00000281043 AQRO60306 1485 aaKnown RBP eCLIP29.77■■■□□ 2.36
MYCN-201ENST00000281043 CTTNBP2Q8WZ74 1663 aa29.74■■■□□ 2.35
MYCN-201ENST00000281043 TONSLQ96HA7 1378 aa29.73■■■□□ 2.35
MYCN-201ENST00000281043 HNRNPUQ00839 825 aaKnown RBP eCLIP29.73■■■□□ 2.35
MYCN-201ENST00000281043 IRX6P78412 446 aaPredicted RBP29.72■■■□□ 2.35
MYCN-201ENST00000281043 CFAP43Q8NDM7 1665 aa29.7■■■□□ 2.35
MYCN-201ENST00000281043 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.35
MYCN-201ENST00000281043 EFCAB5A4FU69 1503 aa29.7■■■□□ 2.34
MYCN-201ENST00000281043 PRKCSHP14314 528 aaPredicted RBP29.7■■■□□ 2.34
MYCN-201ENST00000281043 DEKP35659 375 aaKnown RBP29.7■■■□□ 2.34
MYCN-201ENST00000281043 ERICH6BQ5W0A0 696 aa29.65■■■□□ 2.34
MYCN-201ENST00000281043 CASKIN1Q8WXD9 1431 aa29.65■■■□□ 2.34
MYCN-201ENST00000281043 FYCO1Q9BQS8 1478 aa29.62■■■□□ 2.33
MYCN-201ENST00000281043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.62■■■□□ 2.33
MYCN-201ENST00000281043 ZNF608Q9ULD9 1512 aaPredicted RBP29.6■■■□□ 2.33
MYCN-201ENST00000281043 PPP4R2Q9NY27 417 aa29.58■■■□□ 2.33
MYCN-201ENST00000281043 FMN1Q68DA7 1419 aa29.58■■■□□ 2.33
MYCN-201ENST00000281043 SNAPC4Q5SXM2 1469 aa29.56■■■□□ 2.32
MYCN-201ENST00000281043 SAMD9Q5K651 1589 aa29.53■■■□□ 2.32
MYCN-201ENST00000281043 CCDC18Q5T9S5 1454 aa29.53■■■□□ 2.32
MYCN-201ENST00000281043 PBRM1Q86U86 1689 aa29.53■■■□□ 2.32
MYCN-201ENST00000281043 UACAQ9BZF9 1416 aa29.5■■■□□ 2.31
MYCN-201ENST00000281043 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
MYCN-201ENST00000281043 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
MYCN-201ENST00000281043 ERCC6Q03468 1493 aa29.45■■■□□ 2.3
MYCN-201ENST00000281043 FGD6Q6ZV73 1430 aa29.45■■■□□ 2.3
MYCN-201ENST00000281043 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.3
MYCN-201ENST00000281043 WDR62O43379 1518 aa29.44■■■□□ 2.3
MYCN-201ENST00000281043 ARID3CA6NKF2 412 aa29.43■■■□□ 2.3
MYCN-201ENST00000281043 NOP58Q9Y2X3 529 aaKnown RBP29.43■■■□□ 2.3
MYCN-201ENST00000281043 IFT140Q96RY7 1462 aa29.43■■■□□ 2.3
MYCN-201ENST00000281043 HFM1A2PYH4 1435 aa29.43■■■□□ 2.3
MYCN-201ENST00000281043 WASHC2AQ641Q2 1341 aa29.42■■■□□ 2.3
MYCN-201ENST00000281043 LRRIQ1Q96JM4 1722 aa29.4■■■□□ 2.3
MYCN-201ENST00000281043 KDM5BQ9UGL1 1544 aa29.39■■■□□ 2.3
MYCN-201ENST00000281043 PTPN23Q9H3S7 1636 aa29.39■■■□□ 2.29
MYCN-201ENST00000281043 PTPRKQ15262 1439 aa29.37■■■□□ 2.29
MYCN-201ENST00000281043 HSPA5P11021 654 aaKnown RBP29.37■■■□□ 2.29
MYCN-201ENST00000281043 B4GALNT3Q6L9W6 998 aa29.36■■■□□ 2.29
MYCN-201ENST00000281043 IQGAP2Q13576 1575 aa29.35■■■□□ 2.29
MYCN-201ENST00000281043 NBR1Q14596 966 aa29.35■■■□□ 2.29
MYCN-201ENST00000281043 CCDC184Q52MB2 194 aa29.33■■■□□ 2.29
MYCN-201ENST00000281043 NAIPQ13075 1403 aa29.31■■■□□ 2.28
MYCN-201ENST00000281043 PAK3O75914 559 aaPredicted RBP29.29■■■□□ 2.28
MYCN-201ENST00000281043 CNTLNQ9NXG0 1405 aa29.28■■■□□ 2.28
MYCN-201ENST00000281043 NCOA2Q15596 1464 aa29.28■■■□□ 2.28
MYCN-201ENST00000281043 EIF4G3O43432 1585 aaKnown RBP29.27■■■□□ 2.28
MYCN-201ENST00000281043 EIF4G2P78344 907 aaKnown RBP eCLIP29.26■■■□□ 2.28
MYCN-201ENST00000281043 FAM9BQ8IZU0 186 aa29.26■■■□□ 2.28
MYCN-201ENST00000281043 MAGI3Q5TCQ9 1506 aa29.26■■■□□ 2.28
MYCN-201ENST00000281043 FBLN2P98095 1184 aa29.24■■■□□ 2.27
MYCN-201ENST00000281043 ZBED9Q6R2W3 1325 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms