RNA–Protein interactions for RNA: ENST00000276410.6

CHRNA6-201, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA6, Length 2,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-201ENST00000276410 MYT1Q01538 1121 aa14.41□□□□□ -0.1
CHRNA6-201ENST00000276410 ATP1B4Q9UN42 357 aaPredicted RBP14.39□□□□□ -0.11
CHRNA6-201ENST00000276410 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
CHRNA6-201ENST00000276410 DNMBPQ6XZF7 1577 aa14.38□□□□□ -0.11
CHRNA6-201ENST00000276410 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
CHRNA6-201ENST00000276410 RAB3GAP2Q9H2M9 1393 aa14.37□□□□□ -0.11
CHRNA6-201ENST00000276410 TIAM1Q13009 1591 aa14.36□□□□□ -0.11
CHRNA6-201ENST00000276410 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
CHRNA6-201ENST00000276410 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.12
CHRNA6-201ENST00000276410 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
CHRNA6-201ENST00000276410 PCF11O94913 1555 aaKnown RBP14.33□□□□□ -0.12
CHRNA6-201ENST00000276410 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
CHRNA6-201ENST00000276410 SIN3AQ96ST3 1273 aa14.31□□□□□ -0.12
CHRNA6-201ENST00000276410 BCANQ96GW7 911 aa14.31□□□□□ -0.12
CHRNA6-201ENST00000276410 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
CHRNA6-201ENST00000276410 LRRC9Q6ZRR7 1453 aa14.29□□□□□ -0.12
CHRNA6-201ENST00000276410 PHLDB1Q86UU1 1377 aa14.29□□□□□ -0.12
CHRNA6-201ENST00000276410 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
CHRNA6-201ENST00000276410 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
CHRNA6-201ENST00000276410 FAM50AQ14320 339 aaKnown RBP14.28□□□□□ -0.12
CHRNA6-201ENST00000276410 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.12
CHRNA6-201ENST00000276410 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.13
CHRNA6-201ENST00000276410 WDR97A6NE52 1622 aa14.27□□□□□ -0.13
CHRNA6-201ENST00000276410 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.13
CHRNA6-201ENST00000276410 CFAP43Q8NDM7 1665 aa14.25□□□□□ -0.13
CHRNA6-201ENST00000276410 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
CHRNA6-201ENST00000276410 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
CHRNA6-201ENST00000276410 CUL7Q14999 1698 aa14.24□□□□□ -0.13
CHRNA6-201ENST00000276410 CTTNBP2Q8WZ74 1663 aa14.24□□□□□ -0.13
CHRNA6-201ENST00000276410 MAP3K1Q13233 1512 aa14.23□□□□□ -0.13
CHRNA6-201ENST00000276410 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
CHRNA6-201ENST00000276410 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
CHRNA6-201ENST00000276410 FYCO1Q9BQS8 1478 aa14.19□□□□□ -0.14
CHRNA6-201ENST00000276410 FKBP8Q14318 412 aa14.19□□□□□ -0.14
CHRNA6-201ENST00000276410 GAPVD1Q14C86 1478 aa14.17□□□□□ -0.14
CHRNA6-201ENST00000276410 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
CHRNA6-201ENST00000276410 CASKIN1Q8WXD9 1431 aa14.16□□□□□ -0.14
CHRNA6-201ENST00000276410 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
CHRNA6-201ENST00000276410 PPP1R15AO75807 674 aaPredicted RBP14.16□□□□□ -0.14
CHRNA6-201ENST00000276410 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
CHRNA6-201ENST00000276410 FMN1Q68DA7 1419 aa14.13□□□□□ -0.15
CHRNA6-201ENST00000276410 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
CHRNA6-201ENST00000276410 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
CHRNA6-201ENST00000276410 AQRO60306 1485 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHRNA6-201ENST00000276410 LRRIQ1Q96JM4 1722 aa14.1□□□□□ -0.15
CHRNA6-201ENST00000276410 SAMD9Q5K651 1589 aa14.08□□□□□ -0.15
CHRNA6-201ENST00000276410 ANP32EQ9BTT0 268 aa14.07□□□□□ -0.16
CHRNA6-201ENST00000276410 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
CHRNA6-201ENST00000276410 FGD6Q6ZV73 1430 aa14.07□□□□□ -0.16
CHRNA6-201ENST00000276410 ARID3CA6NKF2 412 aa14.06□□□□□ -0.16
CHRNA6-201ENST00000276410 ANP32CO43423 234 aa14.04□□□□□ -0.16
CHRNA6-201ENST00000276410 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
CHRNA6-201ENST00000276410 PTPRKQ15262 1439 aa14.03□□□□□ -0.16
CHRNA6-201ENST00000276410 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
CHRNA6-201ENST00000276410 NCOA2Q15596 1464 aa14.03□□□□□ -0.16
CHRNA6-201ENST00000276410 TONSLQ96HA7 1378 aa14.01□□□□□ -0.17
CHRNA6-201ENST00000276410 NEFLP07196 543 aa14.01□□□□□ -0.17
CHRNA6-201ENST00000276410 CCDC18Q5T9S5 1454 aa14□□□□□ -0.17
CHRNA6-201ENST00000276410 MAGI3Q5TCQ9 1506 aa13.99□□□□□ -0.17
CHRNA6-201ENST00000276410 CCER2I3L3R5 266 aa13.99□□□□□ -0.17
CHRNA6-201ENST00000276410 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
CHRNA6-201ENST00000276410 RBM19Q9Y4C8 960 aaKnown RBP13.99□□□□□ -0.17
CHRNA6-201ENST00000276410 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
CHRNA6-201ENST00000276410 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
CHRNA6-201ENST00000276410 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
CHRNA6-201ENST00000276410 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
CHRNA6-201ENST00000276410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHRNA6-201ENST00000276410 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
CHRNA6-201ENST00000276410 EHBP1L1Q8N3D4 1523 aa13.97□□□□□ -0.17
CHRNA6-201ENST00000276410 IQGAP2Q13576 1575 aa13.97□□□□□ -0.17
CHRNA6-201ENST00000276410 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.17
CHRNA6-201ENST00000276410 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
CHRNA6-201ENST00000276410 CDK13Q14004 1512 aaKnown RBP13.95□□□□□ -0.18
CHRNA6-201ENST00000276410 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
CHRNA6-201ENST00000276410 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
CHRNA6-201ENST00000276410 HFM1A2PYH4 1435 aa13.94□□□□□ -0.18
CHRNA6-201ENST00000276410 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
CHRNA6-201ENST00000276410 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
CHRNA6-201ENST00000276410 RRP7BPQ9NSQ0 103 aa13.93□□□□□ -0.18
CHRNA6-201ENST00000276410 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
CHRNA6-201ENST00000276410 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
CHRNA6-201ENST00000276410 NAIPQ13075 1403 aa13.92□□□□□ -0.18
CHRNA6-201ENST00000276410 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHRNA6-201ENST00000276410 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.18
CHRNA6-201ENST00000276410 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
CHRNA6-201ENST00000276410 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
CHRNA6-201ENST00000276410 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
CHRNA6-201ENST00000276410 MSH5O43196 834 aa13.88□□□□□ -0.19
CHRNA6-201ENST00000276410 WDR62O43379 1518 aa13.87□□□□□ -0.19
CHRNA6-201ENST00000276410 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
CHRNA6-201ENST00000276410 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
CHRNA6-201ENST00000276410 DENND4BO75064 1496 aaPredicted RBP13.85□□□□□ -0.19
CHRNA6-201ENST00000276410 FOXD1Q16676 465 aa13.85□□□□□ -0.19
CHRNA6-201ENST00000276410 EIF4G3O43432 1585 aaKnown RBP13.84□□□□□ -0.19
CHRNA6-201ENST00000276410 KDM6BO15054 1643 aa13.84□□□□□ -0.19
CHRNA6-201ENST00000276410 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
CHRNA6-201ENST00000276410 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
CHRNA6-201ENST00000276410 FBLN2P98095 1184 aa13.82□□□□□ -0.2
CHRNA6-201ENST00000276410 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
CHRNA6-201ENST00000276410 C11orf95C9JLR9 678 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms