RNA–Protein interactions for RNA: ENST00000275016.2

CYP39A1-201, Transcript of cytochrome P450 family 39 subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYP39A1, Length 2,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1-201ENST00000275016 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
CYP39A1-201ENST00000275016 VASPP50552 380 aaPredicted RBP14.3□□□□□ -0.12
CYP39A1-201ENST00000275016 PIAS4Q8N2W9 510 aaPredicted RBP14.28□□□□□ -0.12
CYP39A1-201ENST00000275016 KIF21AQ7Z4S6 1674 aa14.27□□□□□ -0.12
CYP39A1-201ENST00000275016 WDR62O43379 1518 aa14.26□□□□□ -0.13
CYP39A1-201ENST00000275016 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
CYP39A1-201ENST00000275016 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
CYP39A1-201ENST00000275016 WIZO95785 1651 aa14.21□□□□□ -0.14
CYP39A1-201ENST00000275016 CFTRP13569 1480 aa14.2□□□□□ -0.14
CYP39A1-201ENST00000275016 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
CYP39A1-201ENST00000275016 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
CYP39A1-201ENST00000275016 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
CYP39A1-201ENST00000275016 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
CYP39A1-201ENST00000275016 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
CYP39A1-201ENST00000275016 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
CYP39A1-201ENST00000275016 PRDM2Q13029 1718 aa14.09□□□□□ -0.15
CYP39A1-201ENST00000275016 LOC105371045A0A1W2PR82 267 aa14.08□□□□□ -0.16
CYP39A1-201ENST00000275016 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
CYP39A1-201ENST00000275016 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.16
CYP39A1-201ENST00000275016 OSCARQ8IYS5 282 aa14.02□□□□□ -0.16
CYP39A1-201ENST00000275016 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.16
CYP39A1-201ENST00000275016 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
CYP39A1-201ENST00000275016 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
CYP39A1-201ENST00000275016 CCDC9Q9Y3X0 531 aaKnown RBP13.97□□□□□ -0.17
CYP39A1-201ENST00000275016 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
CYP39A1-201ENST00000275016 RGL2O15211 777 aa13.93□□□□□ -0.18
CYP39A1-201ENST00000275016 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
CYP39A1-201ENST00000275016 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
CYP39A1-201ENST00000275016 PROM2Q8N271 834 aa13.91□□□□□ -0.18
CYP39A1-201ENST00000275016 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
CYP39A1-201ENST00000275016 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
CYP39A1-201ENST00000275016 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
CYP39A1-201ENST00000275016 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
CYP39A1-201ENST00000275016 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
CYP39A1-201ENST00000275016 CHGAP10645 457 aaKnown RBP13.82□□□□□ -0.2
CYP39A1-201ENST00000275016 ARID3AQ99856 593 aa13.82□□□□□ -0.2
CYP39A1-201ENST00000275016 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
CYP39A1-201ENST00000275016 ZBTB7CA1YPR0 619 aa13.81□□□□□ -0.2
CYP39A1-201ENST00000275016 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
CYP39A1-201ENST00000275016 EIF4G3O43432 1585 aaKnown RBP13.77□□□□□ -0.2
CYP39A1-201ENST00000275016 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
CYP39A1-201ENST00000275016 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
CYP39A1-201ENST00000275016 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
CYP39A1-201ENST00000275016 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
CYP39A1-201ENST00000275016 RIMBP3CA6NJZ7 1639 aa13.73□□□□□ -0.21
CYP39A1-201ENST00000275016 RIMBP3BA6NNM3 1639 aa13.73□□□□□ -0.21
CYP39A1-201ENST00000275016 RIMBP3Q9UFD9 1639 aa13.73□□□□□ -0.21
CYP39A1-201ENST00000275016 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
CYP39A1-201ENST00000275016 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
CYP39A1-201ENST00000275016 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
CYP39A1-201ENST00000275016 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
CYP39A1-201ENST00000275016 IGSF3O75054 1194 aa13.71□□□□□ -0.21
CYP39A1-201ENST00000275016 C1orf115Q9H7X2 142 aa13.71□□□□□ -0.22
CYP39A1-201ENST00000275016 SOGA1O94964 1423 aa13.71□□□□□ -0.22
CYP39A1-201ENST00000275016 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
CYP39A1-201ENST00000275016 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
CYP39A1-201ENST00000275016 PDIA4P13667 645 aaKnown RBP13.68□□□□□ -0.22
CYP39A1-201ENST00000275016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.66□□□□□ -0.22
CYP39A1-201ENST00000275016 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
CYP39A1-201ENST00000275016 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.22
CYP39A1-201ENST00000275016 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
CYP39A1-201ENST00000275016 CHD1O14646 1710 aa13.64□□□□□ -0.23
CYP39A1-201ENST00000275016 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
CYP39A1-201ENST00000275016 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
CYP39A1-201ENST00000275016 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
CYP39A1-201ENST00000275016 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
CYP39A1-201ENST00000275016 CUX1P39880 1505 aa13.57□□□□□ -0.24
CYP39A1-201ENST00000275016 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
CYP39A1-201ENST00000275016 CDK11BP21127 795 aaKnown RBP13.57□□□□□ -0.24
CYP39A1-201ENST00000275016 CDK11AQ9UQ88 783 aaPredicted RBP13.57□□□□□ -0.24
CYP39A1-201ENST00000275016 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
CYP39A1-201ENST00000275016 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
CYP39A1-201ENST00000275016 ABCA10Q8WWZ4 1543 aa13.56□□□□□ -0.24
CYP39A1-201ENST00000275016 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
CYP39A1-201ENST00000275016 HMGB1P09429 215 aaKnown RBP13.55□□□□□ -0.24
CYP39A1-201ENST00000275016 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
CYP39A1-201ENST00000275016 CYB5RLQ6IPT4 315 aa13.54□□□□□ -0.24
CYP39A1-201ENST00000275016 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
CYP39A1-201ENST00000275016 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
CYP39A1-201ENST00000275016 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.24
CYP39A1-201ENST00000275016 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
CYP39A1-201ENST00000275016 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
CYP39A1-201ENST00000275016 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
CYP39A1-201ENST00000275016 ABCA5Q8WWZ7 1642 aa13.49□□□□□ -0.25
CYP39A1-201ENST00000275016 ARID3CA6NKF2 412 aa13.48□□□□□ -0.25
CYP39A1-201ENST00000275016 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
CYP39A1-201ENST00000275016 KCTD17Q8N5Z5 321 aa13.45□□□□□ -0.26
CYP39A1-201ENST00000275016 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
CYP39A1-201ENST00000275016 TOP2BQ02880 1626 aa13.44□□□□□ -0.26
CYP39A1-201ENST00000275016 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
CYP39A1-201ENST00000275016 NKX1-1Q15270 411 aaPredicted RBP13.44□□□□□ -0.26
CYP39A1-201ENST00000275016 P3H3Q8IVL6 736 aa13.44□□□□□ -0.26
CYP39A1-201ENST00000275016 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
CYP39A1-201ENST00000275016 FHAD1B1AJZ9 1412 aa13.43□□□□□ -0.26
CYP39A1-201ENST00000275016 APBB1O00213 710 aa13.42□□□□□ -0.26
CYP39A1-201ENST00000275016 GTPBP6O43824 516 aaPredicted RBP13.42□□□□□ -0.26
CYP39A1-201ENST00000275016 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
CYP39A1-201ENST00000275016 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
CYP39A1-201ENST00000275016 RAD21O60216 631 aa13.41□□□□□ -0.26
CYP39A1-201ENST00000275016 NUP160Q12769 1436 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms