RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
TPM3-201ENST00000271850 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
TPM3-201ENST00000271850 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
TPM3-201ENST00000271850 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
TPM3-201ENST00000271850 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
TPM3-201ENST00000271850 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
TPM3-201ENST00000271850 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
TPM3-201ENST00000271850 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
TPM3-201ENST00000271850 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
TPM3-201ENST00000271850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.195e-9■■■■■ 27.9
TPM3-201ENST00000271850 ADAMTS12P58397 1594 aa16.21■□□□□ 0.18
TPM3-201ENST00000271850 ERCC6L2Q5T890 1561 aa16.21■□□□□ 0.18
TPM3-201ENST00000271850 WRNQ14191 1432 aaPredicted RBP eCLIP16.19■□□□□ 0.189e-7■■■□□ 18.8
TPM3-201ENST00000271850 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
TPM3-201ENST00000271850 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
TPM3-201ENST00000271850 NUP160Q12769 1436 aa16.17■□□□□ 0.18
TPM3-201ENST00000271850 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
TPM3-201ENST00000271850 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
TPM3-201ENST00000271850 ERICH3Q5RHP9 1530 aa16.1■□□□□ 0.17
TPM3-201ENST00000271850 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
TPM3-201ENST00000271850 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
TPM3-201ENST00000271850 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
TPM3-201ENST00000271850 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
TPM3-201ENST00000271850 IGF1RP08069 1367 aa15.92■□□□□ 0.14
TPM3-201ENST00000271850 JPH4Q96JJ6 628 aa15.92■□□□□ 0.14
TPM3-201ENST00000271850 KIF13AQ9H1H9 1805 aa15.89■□□□□ 0.13
TPM3-201ENST00000271850 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
TPM3-201ENST00000271850 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
TPM3-201ENST00000271850 ADCY10Q96PN6 1610 aa15.84■□□□□ 0.13
TPM3-201ENST00000271850 CUL7Q14999 1698 aa15.83■□□□□ 0.13
TPM3-201ENST00000271850 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
TPM3-201ENST00000271850 ABCC10Q5T3U5 1492 aa15.78■□□□□ 0.12
TPM3-201ENST00000271850 DIP2BQ9P265 1576 aa15.78■□□□□ 0.12
TPM3-201ENST00000271850 CARMIL1Q5VZK9 1371 aa15.76■□□□□ 0.11
TPM3-201ENST00000271850 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
TPM3-201ENST00000271850 FAM69CQ0P6D2 419 aa15.72■□□□□ 0.11
TPM3-201ENST00000271850 CAPN15O75808 1086 aa15.71■□□□□ 0.11
TPM3-201ENST00000271850 DISP1Q96F81 1524 aa15.68■□□□□ 0.1
TPM3-201ENST00000271850 IQGAP2Q13576 1575 aa15.68■□□□□ 0.1
TPM3-201ENST00000271850 PTPRGP23470 1445 aa15.67■□□□□ 0.1
TPM3-201ENST00000271850 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
TPM3-201ENST00000271850 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
TPM3-201ENST00000271850 DSG3P32926 999 aa15.64■□□□□ 0.09
TPM3-201ENST00000271850 ABCC2Q92887 1545 aa15.63■□□□□ 0.09
TPM3-201ENST00000271850 POTEHQ6S545 545 aa15.62■□□□□ 0.09
TPM3-201ENST00000271850 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
TPM3-201ENST00000271850 UHRF1BP1LA0JNW5 1464 aa15.61■□□□□ 0.09
TPM3-201ENST00000271850 RAPGEF2Q9Y4G8 1499 aa15.61■□□□□ 0.09
TPM3-201ENST00000271850 UGGT2Q9NYU1 1516 aa15.61■□□□□ 0.09
TPM3-201ENST00000271850 TTBK1Q5TCY1 1321 aaPredicted RBP15.61■□□□□ 0.09
TPM3-201ENST00000271850 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
TPM3-201ENST00000271850 PPRC1Q5VV67 1664 aaKnown RBP15.6■□□□□ 0.09
TPM3-201ENST00000271850 CARMIL2Q6F5E8 1435 aa15.6■□□□□ 0.09
TPM3-201ENST00000271850 ASXL2Q76L83 1435 aa15.59■□□□□ 0.09
TPM3-201ENST00000271850 KDM6BO15054 1643 aa15.58■□□□□ 0.09
TPM3-201ENST00000271850 KIAA0556O60303 1618 aa15.58■□□□□ 0.09
TPM3-201ENST00000271850 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
TPM3-201ENST00000271850 GLI2P10070 1586 aa15.56■□□□□ 0.08
TPM3-201ENST00000271850 KDM5BQ9UGL1 1544 aa15.55■□□□□ 0.08
TPM3-201ENST00000271850 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
TPM3-201ENST00000271850 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.08
TPM3-201ENST00000271850 ZCCHC11Q5TAX3 1644 aaKnown RBP15.52■□□□□ 0.08
TPM3-201ENST00000271850 EPRSP07814 1512 aaKnown RBP15.52■□□□□ 0.07
TPM3-201ENST00000271850 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.07
TPM3-201ENST00000271850 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
TPM3-201ENST00000271850 CTTNBP2Q8WZ74 1663 aa15.49■□□□□ 0.07
TPM3-201ENST00000271850 MAP3K4Q9Y6R4 1608 aa15.49■□□□□ 0.07
TPM3-201ENST00000271850 ABCA8O94911 1581 aa15.45■□□□□ 0.06
TPM3-201ENST00000271850 APLP2Q06481 763 aa15.45■□□□□ 0.06
TPM3-201ENST00000271850 WDR7Q9Y4E6 1490 aa15.42■□□□□ 0.06
TPM3-201ENST00000271850 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
TPM3-201ENST00000271850 ADGRL1O94910 1474 aa15.35■□□□□ 0.05
TPM3-201ENST00000271850 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
TPM3-201ENST00000271850 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
TPM3-201ENST00000271850 SAMD9Q5K651 1589 aa15.33■□□□□ 0.05
TPM3-201ENST00000271850 MAGI3Q5TCQ9 1506 aa15.33■□□□□ 0.04
TPM3-201ENST00000271850 CFAP43Q8NDM7 1665 aa15.32■□□□□ 0.04
TPM3-201ENST00000271850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
TPM3-201ENST00000271850 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
TPM3-201ENST00000271850 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
TPM3-201ENST00000271850 ATP10BO94823 1461 aa15.31■□□□□ 0.04
TPM3-201ENST00000271850 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
TPM3-201ENST00000271850 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
TPM3-201ENST00000271850 KCNA4P22459 653 aa15.28■□□□□ 0.04
TPM3-201ENST00000271850 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
TPM3-201ENST00000271850 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
TPM3-201ENST00000271850 ARID3CA6NKF2 412 aa15.27■□□□□ 0.04
TPM3-201ENST00000271850 ABCB7O75027 752 aa15.26■□□□□ 0.03
TPM3-201ENST00000271850 RAPGEF6Q8TEU7 1601 aa15.24■□□□□ 0.03
TPM3-201ENST00000271850 ABCA9Q8IUA7 1624 aa15.23■□□□□ 0.03
TPM3-201ENST00000271850 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
TPM3-201ENST00000271850 FHOD3Q2V2M9 1422 aa15.21■□□□□ 0.03
TPM3-201ENST00000271850 ARAP3Q8WWN8 1544 aa15.21■□□□□ 0.03
TPM3-201ENST00000271850 KIF21BO75037 1637 aa15.19■□□□□ 0.02
TPM3-201ENST00000271850 EEA1Q15075 1411 aa15.18■□□□□ 0.02
TPM3-201ENST00000271850 FRMPD1Q5SYB0 1578 aa15.17■□□□□ 0.02
TPM3-201ENST00000271850 HECW2Q9P2P5 1572 aa15.17■□□□□ 0.02
TPM3-201ENST00000271850 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
TPM3-201ENST00000271850 RANGAP1P46060 587 aaPredicted RBP15.14■□□□□ 0.01
TPM3-201ENST00000271850 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms